Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_72h.class.cls
#double_gel_8d_versus_double_gel_72h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in classdouble_gel_8d
GeneSetV$POU3F2_02
Enrichment Score (ES)0.5115655
Normalized Enrichment Score (NES)1.8546596
Nominal p-value0.0
FDR q-value0.02287026
FWER p-Value0.842
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$POU3F2_02   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ADMADM
Entrez,  Source
adrenomedullin340.6490.0652Yes
2MAFMAF
Entrez,  Source
v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)730.4840.1130Yes
3SLC24A3SLC24A3
Entrez,  Source
solute carrier family 24 (sodium/potassium/calcium exchanger), member 3810.4670.1613Yes
4LOXLOX
Entrez,  Source
lysyl oxidase820.4650.2099Yes
5CDH13CDH13
Entrez,  Source
cadherin 13, H-cadherin (heart)1280.3910.2474Yes
6FOXP1FOXP1
Entrez,  Source
forkhead box P11740.3430.2799Yes
7ACTG2ACTG2
Entrez,  Source
actin, gamma 2, smooth muscle, enteric3910.2120.2857Yes
8CUTL1CUTL1
Entrez,  Source
cut-like 1, CCAAT displacement protein (Drosophila)5160.1800.2952Yes
9IGSF4IGSF4
Entrez,  Source
immunoglobulin superfamily, member 45170.1800.3140Yes
10RAB3CRAB3C
Entrez,  Source
RAB3C, member RAS oncogene family5490.1720.3296Yes
11DUSP5DUSP5
Entrez,  Source
dual specificity phosphatase 55530.1720.3474Yes
12CYR61CYR61
Entrez,  Source
cysteine-rich, angiogenic inducer, 615590.1710.3649Yes
13SCRN1SCRN1
Entrez,  Source
secernin 15680.1700.3820Yes
14PDGFAPDGFA
Entrez,  Source
platelet-derived growth factor alpha polypeptide6190.1620.3952Yes
15GCM1GCM1
Entrez,  Source
glial cells missing homolog 1 (Drosophila)6230.1620.4119Yes
16BIRC4BIRC4
Entrez,  Source
baculoviral IAP repeat-containing 46300.1610.4283Yes
17DPYDDPYD
Entrez,  Source
dihydropyrimidine dehydrogenase6330.1600.4449Yes
18CSF3CSF3
Entrez,  Source
colony stimulating factor 3 (granulocyte)6850.1520.4569Yes
19OTX2OTX2
Entrez,  Source
orthodenticle homolog 2 (Drosophila)7080.1500.4709Yes
20PLAG1PLAG1
Entrez,  Source
pleiomorphic adenoma gene 17560.1440.4824Yes
21LMO4LMO4
Entrez,  Source
LIM domain only 48270.1360.4914Yes
22GABRG2GABRG2
Entrez,  Source
gamma-aminobutyric acid (GABA) A receptor, gamma 29620.1240.4943Yes
23DSCR1DSCR1
Entrez,  Source
Down syndrome critical region gene 110980.1150.4961Yes
24SEMA3ASEMA3A
Entrez,  Source
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A11980.1090.5001Yes
25LPHN1LPHN1
Entrez,  Source
latrophilin 112710.1050.5057Yes
26SYT1SYT1
Entrez,  Source
synaptotagmin I13350.1020.5116Yes
27POU2F1POU2F1
Entrez,  Source
POU domain, class 2, transcription factor 114750.0950.5110No
28BMPR2BMPR2
Entrez,  Source
bone morphogenetic protein receptor, type II (serine/threonine kinase)18200.0800.4933No
29NEUROG1NEUROG1
Entrez,  Source
neurogenin 118870.0770.4964No
30TBXAS1TBXAS1
Entrez,  Source
thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)21430.0690.4843No
31CXADRCXADR
Entrez,  Source
coxsackie virus and adenovirus receptor22310.0660.4847No
32ANP32AANP32A
Entrez,  Source
acidic (leucine-rich) nuclear phosphoprotein 32 family, member A22790.0650.4879No
33ING1ING1
Entrez,  Source
inhibitor of growth family, member 122890.0650.4940No
34FKRPFKRP
Entrez,  Source
fukutin related protein23350.0640.4973No
35LGI1LGI1
Entrez,  Source
leucine-rich, glioma inactivated 123650.0630.5017No
36GPC4GPC4
Entrez,  Source
glypican 425530.0580.4936No
37SLC6A15SLC6A15
Entrez,  Source
solute carrier family 6, member 1525850.0580.4973No
38TFB2MTFB2M
Entrez,  Source
transcription factor B2, mitochondrial28530.0520.4826No
39NFIXNFIX
Entrez,  Source
nuclear factor I/X (CCAAT-binding transcription factor)29460.0500.4808No
40DLX1DLX1
Entrez,  Source
distal-less homeobox 130000.0480.4819No
41HOXA4HOXA4
Entrez,  Source
homeobox A430200.0480.4855No
42DCNDCN
Entrez,  Source
decorin30290.0480.4899No
43SFRP2SFRP2
Entrez,  Source
secreted frizzled-related protein 230410.0480.4940No
44H3F3BH3F3B
Entrez,  Source
H3 histone, family 3B (H3.3B)30950.0470.4949No
45GBX2GBX2
Entrez,  Source
gastrulation brain homeobox 232340.0440.4891No
46NUDT3NUDT3
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 332900.0430.4894No
47FGF20FGF20
Entrez,  Source
fibroblast growth factor 2034080.0400.4848No
48SLC22A17SLC22A17
Entrez,  Source
solute carrier family 22 (organic cation transporter), member 1734600.0390.4850No
49GDI1GDI1
Entrez,  Source
GDP dissociation inhibitor 134860.0390.4872No
50ZFHX1BZFHX1B
Entrez,  Source
zinc finger homeobox 1b38020.0330.4669No
51NEO1NEO1
Entrez,  Source
neogenin homolog 1 (chicken)38350.0330.4679No
52PSMA1PSMA1
Entrez,  Source
proteasome (prosome, macropain) subunit, alpha type, 142250.0270.4413No
53UBBUBB
Entrez,  Source
ubiquitin B43790.0240.4322No
54POU1F1POU1F1
Entrez,  Source
POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1)47410.0190.4070No
55HPCAL4HPCAL4
Entrez,  Source
hippocalcin like 448680.0170.3992No
56TEAD3TEAD3
Entrez,  Source
TEA domain family member 352280.0120.3734No
57CYP4B1CYP4B1
Entrez,  Source
cytochrome P450, family 4, subfamily B, polypeptide 153800.0100.3630No
58PRDX2PRDX2
Entrez,  Source
peroxiredoxin 257370.0050.3367No
59SHHSHH
Entrez,  Source
sonic hedgehog homolog (Drosophila)57790.0050.3341No
60LMNALMNA
Entrez,  Source
lamin A/C58050.0040.3326No
61FGF7FGF7
Entrez,  Source
fibroblast growth factor 7 (keratinocyte growth factor)58750.0040.3278No
62DGKGDGKG
Entrez,  Source
diacylglycerol kinase, gamma 90kDa59340.0030.3237No
63PCDH8PCDH8
Entrez,  Source
protocadherin 859870.0020.3200No
64UNC13DUNC13D
Entrez,  Source
unc-13 homolog D (C. elegans)6157-0.0000.3073No
65TOP1TOP1
Entrez,  Source
topoisomerase (DNA) I6189-0.0000.3050No
66KCNK2KCNK2
Entrez,  Source
potassium channel, subfamily K, member 26328-0.0020.2948No
67ATP6V0CATP6V0C
Entrez,  Source
ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c6333-0.0020.2947No
68SATB1SATB1
Entrez,  Source
special AT-rich sequence binding protein 1 (binds to nuclear matrix/scaffold-associating DNA's)6392-0.0030.2907No
69ESRRAESRRA
Entrez,  Source
estrogen-related receptor alpha6415-0.0030.2893No
70NRASNRAS
Entrez,  Source
neuroblastoma RAS viral (v-ras) oncogene homolog6534-0.0050.2809No
71MAL2MAL2
Entrez,  Source
mal, T-cell differentiation protein 26641-0.0060.2736No
72PANK4PANK4
Entrez,  Source
pantothenate kinase 46721-0.0070.2684No
73PIK3R1PIK3R1
Entrez,  Source
phosphoinositide-3-kinase, regulatory subunit 1 (p85 alpha)6769-0.0080.2656No
74HSD3B7HSD3B7
Entrez,  Source
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 76860-0.0090.2598No
75GPR85GPR85
Entrez,  Source
G protein-coupled receptor 856883-0.0090.2591No
76XYLT2XYLT2
Entrez,  Source
xylosyltransferase II6905-0.0090.2585No
77ERGERG
Entrez,  Source
v-ets erythroblastosis virus E26 oncogene homolog (avian)6929-0.0100.2578No
78SMARCA2SMARCA2
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 26971-0.0100.2557No
79CRYZL1CRYZL1
Entrez,  Source
crystallin, zeta (quinone reductase)-like 17045-0.0110.2514No
80ASPAASPA
Entrez,  Source
aspartoacylase (Canavan disease)7439-0.0160.2234No
81MTUS1MTUS1
Entrez,  Source
mitochondrial tumor suppressor 17445-0.0160.2247No
82ADD3ADD3
Entrez,  Source
adducin 3 (gamma)7901-0.0220.1926No
83DNAH7DNAH7
Entrez,  Source
dynein, axonemal, heavy chain 78067-0.0240.1827No
84MAP2K5MAP2K5
Entrez,  Source
mitogen-activated protein kinase kinase 58547-0.0310.1497No
85PLCD4PLCD4
Entrez,  Source
phospholipase C, delta 48610-0.0320.1484No
86SOSTDC1SOSTDC1
Entrez,  Source
sclerostin domain containing 18869-0.0360.1327No
87TNNI1TNNI1
Entrez,  Source
troponin I type 1 (skeletal, slow)9147-0.0390.1159No
88ISL1ISL1
Entrez,  Source
ISL1 transcription factor, LIM/homeodomain, (islet-1)9285-0.0420.1099No
89AGTR2AGTR2
Entrez,  Source
angiotensin II receptor, type 29378-0.0430.1074No
90PHC2PHC2
Entrez,  Source
polyhomeotic homolog 2 (Drosophila)9654-0.0480.0916No
91PNMA1PNMA1
Entrez,  Source
paraneoplastic antigen MA19848-0.0510.0824No
92CXXC5CXXC5
Entrez,  Source
CXXC finger 510086-0.0550.0702No
93PPP2R2BPPP2R2B
Entrez,  Source
protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform10110-0.0550.0742No
94HTR4HTR4
Entrez,  Source
5-hydroxytryptamine (serotonin) receptor 410483-0.0620.0526No
95PTENPTEN
Entrez,  Source
phosphatase and tensin homolog (mutated in multiple advanced cancers 1)10692-0.0660.0438No
96CDC2L1CDC2L1
Entrez,  Source
cell division cycle 2-like 1 (PITSLRE proteins)10741-0.0670.0472No
97SLC18A3SLC18A3
Entrez,  Source
solute carrier family 18 (vesicular acetylcholine), member 310815-0.0690.0488No
98SIX1SIX1
Entrez,  Source
sine oculis homeobox homolog 1 (Drosophila)11186-0.0780.0290No
99GIPGIP
Entrez,  Source
gastric inhibitory polypeptide11194-0.0780.0366No
100SFRS7SFRS7
Entrez,  Source
splicing factor, arginine/serine-rich 7, 35kDa11343-0.0830.0341No
101PDE3BPDE3B
Entrez,  Source
phosphodiesterase 3B, cGMP-inhibited11375-0.0830.0405No
102ADNPADNP
Entrez,  Source
activity-dependent neuroprotector11378-0.0830.0490No
103ITSN1ITSN1
Entrez,  Source
intersectin 1 (SH3 domain protein)11645-0.0900.0384No
104BAT2BAT2
Entrez,  Source
HLA-B associated transcript 212105-0.1070.0149No
105TAPBPTAPBP
Entrez,  Source
TAP binding protein (tapasin)12109-0.1080.0259No
106MAGED2MAGED2
Entrez,  Source
melanoma antigen family D, 212317-0.1170.0225No
107BST2BST2
Entrez,  Source
bone marrow stromal cell antigen 212353-0.1190.0323No
108MUSKMUSK
Entrez,  Source
muscle, skeletal, receptor tyrosine kinase12426-0.1230.0397No
109DIXDC1DIXDC1
Entrez,  Source
DIX domain containing 112665-0.1380.0361No
110RARBRARB
Entrez,  Source
retinoic acid receptor, beta12717-0.1430.0472No
Table: GSEA details [plain text format]



Fig 2: V$POU3F2_02   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$POU3F2_02: Random ES distribution   
Gene set null distribution of ES for V$POU3F2_02