Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
Upregulated in class | double_gel_8d |
GeneSet | V$POU6F1_01 |
Enrichment Score (ES) | 0.57586914 |
Normalized Enrichment Score (NES) | 2.0546503 |
Nominal p-value | 0.0 |
FDR q-value | 0.0031884823 |
FWER p-Value | 0.083 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | COL1A2 | COL1A2 Entrez,  Source | collagen, type I, alpha 2 | 3 | 1.046 | 0.1255 | Yes |
2 | FSTL1 | FSTL1 Entrez,  Source | follistatin-like 1 | 80 | 0.469 | 0.1761 | Yes |
3 | FABP2 | FABP2 Entrez,  Source | fatty acid binding protein 2, intestinal | 162 | 0.351 | 0.2122 | Yes |
4 | FOXP1 | FOXP1 Entrez,  Source | forkhead box P1 | 174 | 0.343 | 0.2526 | Yes |
5 | SLC22A8 | SLC22A8 Entrez,  Source | solute carrier family 22 (organic anion transporter), member 8 | 199 | 0.322 | 0.2894 | Yes |
6 | FBXO32 | FBXO32 Entrez,  Source | F-box protein 32 | 206 | 0.318 | 0.3272 | Yes |
7 | CUTL1 | CUTL1 Entrez,  Source | cut-like 1, CCAAT displacement protein (Drosophila) | 516 | 0.180 | 0.3255 | Yes |
8 | IGSF4 | IGSF4 Entrez,  Source | immunoglobulin superfamily, member 4 | 517 | 0.180 | 0.3471 | Yes |
9 | CRH | CRH Entrez,  Source | corticotropin releasing hormone | 541 | 0.173 | 0.3662 | Yes |
10 | LMO3 | LMO3 Entrez,  Source | LIM domain only 3 (rhombotin-like 2) | 573 | 0.169 | 0.3841 | Yes |
11 | TGIF | TGIF Entrez,  Source | TGFB-induced factor (TALE family homeobox) | 618 | 0.162 | 0.4003 | Yes |
12 | FABP4 | FABP4 Entrez,  Source | fatty acid binding protein 4, adipocyte | 638 | 0.159 | 0.4180 | Yes |
13 | CBX6 | CBX6 Entrez,  Source | chromobox homolog 6 | 704 | 0.150 | 0.4311 | Yes |
14 | OTX2 | OTX2 Entrez,  Source | orthodenticle homolog 2 (Drosophila) | 708 | 0.150 | 0.4489 | Yes |
15 | PLAG1 | PLAG1 Entrez,  Source | pleiomorphic adenoma gene 1 | 756 | 0.144 | 0.4627 | Yes |
16 | TAX1BP3 | TAX1BP3 Entrez,  Source | Tax1 (human T-cell leukemia virus type I) binding protein 3 | 791 | 0.140 | 0.4770 | Yes |
17 | HS3ST1 | HS3ST1 Entrez,  Source | heparan sulfate (glucosamine) 3-O-sulfotransferase 1 | 830 | 0.136 | 0.4905 | Yes |
18 | PITX2 | PITX2 Entrez,  Source | paired-like homeodomain transcription factor 2 | 850 | 0.134 | 0.5052 | Yes |
19 | KLRG1 | KLRG1 Entrez,  Source | killer cell lectin-like receptor subfamily G, member 1 | 952 | 0.125 | 0.5125 | Yes |
20 | PPARGC1A | PPARGC1A Entrez,  Source | peroxisome proliferative activated receptor, gamma, coactivator 1, alpha | 1068 | 0.116 | 0.5178 | Yes |
21 | CALCR | CALCR Entrez,  Source | calcitonin receptor | 1155 | 0.112 | 0.5248 | Yes |
22 | NR2F1 | NR2F1 Entrez,  Source | nuclear receptor subfamily 2, group F, member 1 | 1234 | 0.108 | 0.5319 | Yes |
23 | DUSP1 | DUSP1 Entrez,  Source | dual specificity phosphatase 1 | 1297 | 0.104 | 0.5397 | Yes |
24 | POU2F1 | POU2F1 Entrez,  Source | POU domain, class 2, transcription factor 1 | 1475 | 0.095 | 0.5378 | Yes |
25 | RTN4 | RTN4 Entrez,  Source | reticulon 4 | 1617 | 0.089 | 0.5378 | Yes |
26 | HOXA2 | HOXA2 Entrez,  Source | homeobox A2 | 1629 | 0.088 | 0.5476 | Yes |
27 | MARCKS | MARCKS Entrez,  Source | myristoylated alanine-rich protein kinase C substrate | 1688 | 0.085 | 0.5534 | Yes |
28 | CDH20 | CDH20 Entrez,  Source | cadherin 20, type 2 | 1727 | 0.083 | 0.5606 | Yes |
29 | NEUROG1 | NEUROG1 Entrez,  Source | neurogenin 1 | 1887 | 0.077 | 0.5579 | Yes |
30 | MYOG | MYOG Entrez,  Source | myogenin (myogenic factor 4) | 1932 | 0.075 | 0.5636 | Yes |
31 | RBMS1 | RBMS1 Entrez,  Source | RNA binding motif, single stranded interacting protein 1 | 1934 | 0.075 | 0.5725 | Yes |
32 | PTF1A | PTF1A Entrez,  Source | pancreas specific transcription factor, 1a | 2008 | 0.073 | 0.5758 | Yes |
33 | FYN | FYN Entrez,  Source | FYN oncogene related to SRC, FGR, YES | 2118 | 0.069 | 0.5759 | Yes |
34 | GMPR | GMPR Entrez,  Source | guanosine monophosphate reductase | 2611 | 0.057 | 0.5456 | No |
35 | DLX1 | DLX1 Entrez,  Source | distal-less homeobox 1 | 3000 | 0.048 | 0.5222 | No |
36 | PTHR1 | PTHR1 Entrez,  Source | parathyroid hormone receptor 1 | 3437 | 0.040 | 0.4941 | No |
37 | LRRC15 | LRRC15 Entrez,  Source | leucine rich repeat containing 15 | 4314 | 0.025 | 0.4310 | No |
38 | CAMK2D | CAMK2D Entrez,  Source | calcium/calmodulin-dependent protein kinase (CaM kinase) II delta | 4524 | 0.022 | 0.4179 | No |
39 | TRAM1 | TRAM1 Entrez,  Source | translocation associated membrane protein 1 | 4581 | 0.021 | 0.4162 | No |
40 | KBTBD10 | KBTBD10 Entrez,  Source | kelch repeat and BTB (POZ) domain containing 10 | 4678 | 0.020 | 0.4114 | No |
41 | MYH8 | MYH8 Entrez,  Source | myosin, heavy chain 8, skeletal muscle, perinatal | 4751 | 0.019 | 0.4082 | No |
42 | GRIN2B | GRIN2B Entrez,  Source | glutamate receptor, ionotropic, N-methyl D-aspartate 2B | 4866 | 0.017 | 0.4017 | No |
43 | MYH4 | MYH4 Entrez,  Source | myosin, heavy chain 4, skeletal muscle | 4973 | 0.016 | 0.3956 | No |
44 | HIP1R | HIP1R Entrez,  Source | huntingtin interacting protein 1 related | 5145 | 0.013 | 0.3843 | No |
45 | NCAM1 | NCAM1 Entrez,  Source | neural cell adhesion molecule 1 | 5249 | 0.012 | 0.3779 | No |
46 | GRIK4 | GRIK4 Entrez,  Source | glutamate receptor, ionotropic, kainate 4 | 5321 | 0.011 | 0.3738 | No |
47 | CTSK | CTSK Entrez,  Source | cathepsin K (pycnodysostosis) | 5416 | 0.010 | 0.3679 | No |
48 | CUGBP2 | CUGBP2 Entrez,  Source | CUG triplet repeat, RNA binding protein 2 | 5461 | 0.009 | 0.3656 | No |
49 | PCTP | PCTP Entrez,  Source | phosphatidylcholine transfer protein | 5573 | 0.007 | 0.3581 | No |
50 | SYT5 | SYT5 Entrez,  Source | synaptotagmin V | 6015 | 0.002 | 0.3251 | No |
51 | ADCYAP1 | ADCYAP1 Entrez,  Source | adenylate cyclase activating polypeptide 1 (pituitary) | 6037 | 0.002 | 0.3237 | No |
52 | ICK | ICK Entrez,  Source | intestinal cell (MAK-like) kinase | 6039 | 0.002 | 0.3238 | No |
53 | KIAA1446 | KIAA1446 Entrez,  Source | - | 6115 | 0.000 | 0.3182 | No |
54 | HOXA5 | HOXA5 Entrez,  Source | homeobox A5 | 6663 | -0.007 | 0.2778 | No |
55 | PANK4 | PANK4 Entrez,  Source | pantothenate kinase 4 | 6721 | -0.007 | 0.2743 | No |
56 | ABLIM2 | ABLIM2 Entrez,  Source | actin binding LIM protein family, member 2 | 6831 | -0.009 | 0.2671 | No |
57 | ERG | ERG Entrez,  Source | v-ets erythroblastosis virus E26 oncogene homolog (avian) | 6929 | -0.010 | 0.2610 | No |
58 | CCR3 | CCR3 Entrez,  Source | chemokine (C-C motif) receptor 3 | 7247 | -0.014 | 0.2387 | No |
59 | LECT1 | LECT1 Entrez,  Source | leukocyte cell derived chemotaxin 1 | 7476 | -0.016 | 0.2235 | No |
60 | GRIN2A | GRIN2A Entrez,  Source | glutamate receptor, ionotropic, N-methyl D-aspartate 2A | 7544 | -0.017 | 0.2205 | No |
61 | RFX3 | RFX3 Entrez,  Source | regulatory factor X, 3 (influences HLA class II expression) | 7612 | -0.018 | 0.2176 | No |
62 | NTF3 | NTF3 Entrez,  Source | neurotrophin 3 | 7788 | -0.021 | 0.2069 | No |
63 | MCART1 | MCART1 Entrez,  Source | mitochondrial carrier triple repeat 1 | 7845 | -0.021 | 0.2052 | No |
64 | MBNL1 | MBNL1 Entrez,  Source | muscleblind-like (Drosophila) | 8090 | -0.025 | 0.1898 | No |
65 | NEK6 | NEK6 Entrez,  Source | NIMA (never in mitosis gene a)-related kinase 6 | 8247 | -0.027 | 0.1813 | No |
66 | TOB1 | TOB1 Entrez,  Source | transducer of ERBB2, 1 | 8322 | -0.028 | 0.1791 | No |
67 | SEPHS1 | SEPHS1 Entrez,  Source | selenophosphate synthetase 1 | 8422 | -0.030 | 0.1752 | No |
68 | INPPL1 | INPPL1 Entrez,  Source | inositol polyphosphate phosphatase-like 1 | 8457 | -0.030 | 0.1763 | No |
69 | SCG2 | SCG2 Entrez,  Source | secretogranin II (chromogranin C) | 8730 | -0.034 | 0.1598 | No |
70 | CASQ2 | CASQ2 Entrez,  Source | calsequestrin 2 (cardiac muscle) | 8759 | -0.034 | 0.1618 | No |
71 | KCNMA1 | KCNMA1 Entrez,  Source | potassium large conductance calcium-activated channel, subfamily M, alpha member 1 | 8797 | -0.035 | 0.1632 | No |
72 | CNTN6 | CNTN6 Entrez,  Source | contactin 6 | 8865 | -0.036 | 0.1625 | No |
73 | SLC12A8 | SLC12A8 Entrez,  Source | solute carrier family 12 (potassium/chloride transporters), member 8 | 8971 | -0.037 | 0.1590 | No |
74 | USP11 | USP11 Entrez,  Source | ubiquitin specific peptidase 11 | 9055 | -0.038 | 0.1573 | No |
75 | RERE | RERE Entrez,  Source | arginine-glutamic acid dipeptide (RE) repeats | 9139 | -0.039 | 0.1558 | No |
76 | COMMD10 | COMMD10 Entrez,  Source | COMM domain containing 10 | 9470 | -0.045 | 0.1362 | No |
77 | HMGN2 | HMGN2 Entrez,  Source | high-mobility group nucleosomal binding domain 2 | 9637 | -0.048 | 0.1294 | No |
78 | CACNA2D3 | CACNA2D3 Entrez,  Source | calcium channel, voltage-dependent, alpha 2/delta 3 subunit | 9729 | -0.049 | 0.1285 | No |
79 | GTF2IRD1 | GTF2IRD1 Entrez,  Source | GTF2I repeat domain containing 1 | 9776 | -0.050 | 0.1310 | No |
80 | GRPR | GRPR Entrez,  Source | gastrin-releasing peptide receptor | 9843 | -0.051 | 0.1321 | No |
81 | CXXC5 | CXXC5 Entrez,  Source | CXXC finger 5 | 10086 | -0.055 | 0.1204 | No |
82 | GRB7 | GRB7 Entrez,  Source | growth factor receptor-bound protein 7 | 10194 | -0.057 | 0.1192 | No |
83 | GRIK3 | GRIK3 Entrez,  Source | glutamate receptor, ionotropic, kainate 3 | 10240 | -0.057 | 0.1226 | No |
84 | DRG1 | DRG1 Entrez,  Source | developmentally regulated GTP binding protein 1 | 10839 | -0.069 | 0.0859 | No |
85 | STOML2 | STOML2 Entrez,  Source | stomatin (EPB72)-like 2 | 10942 | -0.072 | 0.0868 | No |
86 | SYNPR | SYNPR Entrez,  Source | synaptoporin | 11391 | -0.084 | 0.0631 | No |
87 | EFEMP1 | EFEMP1 Entrez,  Source | EGF-containing fibulin-like extracellular matrix protein 1 | 12182 | -0.111 | 0.0167 | No |
88 | FGF13 | FGF13 Entrez,  Source | fibroblast growth factor 13 | 12314 | -0.117 | 0.0209 | No |
89 | POU4F1 | POU4F1 Entrez,  Source | POU domain, class 4, transcription factor 1 | 12659 | -0.138 | 0.0115 | No |
90 | POLR3C | POLR3C Entrez,  Source | polymerase (RNA) III (DNA directed) polypeptide C (62kD) | 12669 | -0.139 | 0.0275 | No |
91 | ID2 | ID2 Entrez,  Source | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein | 13029 | -0.193 | 0.0236 | No |