Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in class	double_gel_8d
GeneSet	V$SRF_C
Enrichment Score (ES)	0.49964708
Normalized Enrichment Score (NES)	1.7972894
Nominal p-value	0.0
FDR q-value	0.032754894
FWER p-Value	0.971

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL1A2	COL1A2 Entrez, Source	collagen, type I, alpha 2	3	1.046	0.0911	Yes
2	RAB30	RAB30 Entrez, Source	RAB30, member RAS oncogene family	55	0.564	0.1364	Yes
3	SLC25A4	SLC25A4 Entrez, Source	solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4	56	0.562	0.1855	Yes
4	EGR2	EGR2 Entrez, Source	early growth response 2 (Krox-20 homolog, Drosophila)	130	0.390	0.2140	Yes
5	FOS	FOS Entrez, Source	v-fos FBJ murine osteosarcoma viral oncogene homolog	142	0.371	0.2455	Yes
6	FOXP1	FOXP1 Entrez, Source	forkhead box P1	174	0.343	0.2732	Yes
7	PPP2R3A	PPP2R3A Entrez, Source	protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha	222	0.305	0.2962	Yes
8	TAGLN	TAGLN Entrez, Source	transgelin	253	0.280	0.3184	Yes
9	DNAJB4	DNAJB4 Entrez, Source	DnaJ (Hsp40) homolog, subfamily B, member 4	278	0.263	0.3395	Yes
10	LTBP1	LTBP1 Entrez, Source	latent transforming growth factor beta binding protein 1	372	0.219	0.3516	Yes
11	ACTG2	ACTG2 Entrez, Source	actin, gamma 2, smooth muscle, enteric	391	0.212	0.3687	Yes
12	RNF39	RNF39 Entrez, Source	ring finger protein 39	400	0.209	0.3864	Yes
13	DUSP5	DUSP5 Entrez, Source	dual specificity phosphatase 5	553	0.172	0.3899	Yes
14	CYR61	CYR61 Entrez, Source	cysteine-rich, angiogenic inducer, 61	559	0.171	0.4045	Yes
15	RGS3	RGS3 Entrez, Source	regulator of G-protein signalling 3	762	0.144	0.4017	Yes
16	NR2F2	NR2F2 Entrez, Source	nuclear receptor subfamily 2, group F, member 2	806	0.139	0.4106	Yes
17	JUNB	JUNB Entrez, Source	jun B proto-oncogene	866	0.132	0.4177	Yes
18	TGFB1I1	TGFB1I1 Entrez, Source	transforming growth factor beta 1 induced transcript 1	919	0.127	0.4249	Yes
19	CALD1	CALD1 Entrez, Source	caldesmon 1	920	0.127	0.4360	Yes
20	NR4A1	NR4A1 Entrez, Source	nuclear receptor subfamily 4, group A, member 1	1192	0.110	0.4251	Yes
21	DUSP2	DUSP2 Entrez, Source	dual specificity phosphatase 2	1208	0.109	0.4335	Yes
22	NR2F1	NR2F1 Entrez, Source	nuclear receptor subfamily 2, group F, member 1	1234	0.108	0.4410	Yes
23	POPDC2	POPDC2 Entrez, Source	popeye domain containing 2	1264	0.106	0.4481	Yes
24	ACTN1	ACTN1 Entrez, Source	actinin, alpha 1	1268	0.106	0.4571	Yes
25	IER2	IER2 Entrez, Source	immediate early response 2	1295	0.104	0.4643	Yes
26	MYO1B	MYO1B Entrez, Source	myosin IB	1311	0.104	0.4722	Yes
27	ITGB6	ITGB6 Entrez, Source	integrin, beta 6	1389	0.099	0.4750	Yes
28	SLC2A4	SLC2A4 Entrez, Source	solute carrier family 2 (facilitated glucose transporter), member 4	1407	0.098	0.4823	Yes
29	TNNC1	TNNC1 Entrez, Source	troponin C type 1 (slow)	1426	0.097	0.4894	Yes
30	PPP1R12A	PPP1R12A Entrez, Source	protein phosphatase 1, regulatory (inhibitor) subunit 12A	1434	0.097	0.4973	Yes
31	SSH3	SSH3 Entrez, Source	slingshot homolog 3 (Drosophila)	1512	0.093	0.4996	Yes
32	ROCK2	ROCK2 Entrez, Source	Rho-associated, coiled-coil containing protein kinase 2	1731	0.083	0.4905	No
33	MYO1E	MYO1E Entrez, Source	myosin IE	1942	0.075	0.4811	No
34	ASB2	ASB2 Entrez, Source	ankyrin repeat and SOCS box-containing 2	2030	0.072	0.4808	No
35	DAPK3	DAPK3 Entrez, Source	death-associated protein kinase 3	2114	0.069	0.4806	No
36	TITF1	TITF1 Entrez, Source	thyroid transcription factor 1	2354	0.063	0.4681	No
37	MCAM	MCAM Entrez, Source	melanoma cell adhesion molecule	2824	0.052	0.4372	No
38	ANXA6	ANXA6 Entrez, Source	annexin A6	2949	0.050	0.4322	No
39	EGR1	EGR1 Entrez, Source	early growth response 1	3274	0.043	0.4114	No
40	EGR4	EGR4 Entrez, Source	early growth response 4	3289	0.043	0.4141	No
41	GPR20	GPR20 Entrez, Source	G protein-coupled receptor 20	3344	0.042	0.4137	No
42	CAP1	CAP1 Entrez, Source	CAP, adenylate cyclase-associated protein 1 (yeast)	3736	0.035	0.3871	No
43	RBBP7	RBBP7 Entrez, Source	retinoblastoma binding protein 7	3793	0.034	0.3859	No
44	ZFHX1B	ZFHX1B Entrez, Source	zinc finger homeobox 1b	3802	0.033	0.3882	No
45	GFPT2	GFPT2 Entrez, Source	glutamine-fructose-6-phosphate transaminase 2	3912	0.032	0.3827	No
46	IL17B	IL17B Entrez, Source	interleukin 17B	3926	0.031	0.3845	No
47	USP52	USP52 Entrez, Source	ubiquitin specific peptidase 52	3994	0.030	0.3820	No
48	CACNA1B	CACNA1B Entrez, Source	calcium channel, voltage-dependent, L type, alpha 1B subunit	4086	0.029	0.3777	No
49	EGR3	EGR3 Entrez, Source	early growth response 3	4101	0.029	0.3791	No
50	DUSP6	DUSP6 Entrez, Source	dual specificity phosphatase 6	4288	0.026	0.3673	No
51	ACTB	ACTB Entrez, Source	actin, beta	4714	0.019	0.3369	No
52	MYH11	MYH11 Entrez, Source	myosin, heavy chain 11, smooth muscle	4899	0.017	0.3245	No
53	DSTN	DSTN Entrez, Source	destrin (actin depolymerizing factor)	5007	0.015	0.3177	No
54	DLL1	DLL1 Entrez, Source	delta-like 1 (Drosophila)	5403	0.010	0.2887	No
55	ACTA1	ACTA1 Entrez, Source	actin, alpha 1, skeletal muscle	5464	0.009	0.2849	No
56	PADI2	PADI2 Entrez, Source	peptidyl arginine deiminase, type II	5592	0.007	0.2760	No
57	MAP1A	MAP1A Entrez, Source	microtubule-associated protein 1A	5715	0.005	0.2672	No
58	FOXE3	FOXE3 Entrez, Source	forkhead box E3	5746	0.005	0.2654	No
59	PLCB3	PLCB3 Entrez, Source	phospholipase C, beta 3 (phosphatidylinositol-specific)	5900	0.003	0.2542	No
60	RASD2	RASD2 Entrez, Source	RASD family, member 2	5901	0.003	0.2544	No
61	FGFRL1	FGFRL1 Entrez, Source	fibroblast growth factor receptor-like 1	6158	-0.000	0.2351	No
62	TOP1	TOP1 Entrez, Source	topoisomerase (DNA) I	6189	-0.000	0.2329	No
63	MRGPRF	MRGPRF Entrez, Source	MAS-related GPR, member F	6362	-0.003	0.2201	No
64	KCNK3	KCNK3 Entrez, Source	potassium channel, subfamily K, member 3	6369	-0.003	0.2199	No
65	HOXA5	HOXA5 Entrez, Source	homeobox A5	6663	-0.007	0.1983	No
66	JPH2	JPH2 Entrez, Source	junctophilin 2	6878	-0.009	0.1830	No
67	TPM3	TPM3 Entrez, Source	tropomyosin 3	6977	-0.010	0.1765	No
68	AOC3	AOC3 Entrez, Source	amine oxidase, copper containing 3 (vascular adhesion protein 1)	7106	-0.012	0.1678	No
69	GRK6	GRK6 Entrez, Source	G protein-coupled receptor kinase 6	7131	-0.012	0.1671	No
70	CFL1	CFL1 Entrez, Source	cofilin 1 (non-muscle)	7218	-0.013	0.1617	No
71	PFN1	PFN1 Entrez, Source	profilin 1	7229	-0.013	0.1622	No
72	AKAP12	AKAP12 Entrez, Source	A kinase (PRKA) anchor protein (gravin) 12	7409	-0.015	0.1500	No
73	ASPA	ASPA Entrez, Source	aspartoacylase (Canavan disease)	7439	-0.016	0.1492	No
74	GGN	GGN Entrez, Source	gametogenetin	8020	-0.024	0.1074	No
75	MBNL1	MBNL1 Entrez, Source	muscleblind-like (Drosophila)	8090	-0.025	0.1044	No
76	RHOJ	RHOJ Entrez, Source	ras homolog gene family, member J	8240	-0.027	0.0955	No
77	FOSL1	FOSL1 Entrez, Source	FOS-like antigen 1	8279	-0.028	0.0950	No
78	YWHAZ	YWHAZ Entrez, Source	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	8338	-0.028	0.0931	No
79	TCF2	TCF2 Entrez, Source	transcription factor 2, hepatic; LF-B3; variant hepatic nuclear factor	8766	-0.034	0.0639	No
80	TLE3	TLE3 Entrez, Source	transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	9039	-0.038	0.0466	No
81	CNN1	CNN1 Entrez, Source	calponin 1, basic, smooth muscle	9196	-0.040	0.0384	No
82	ITGA7	ITGA7 Entrez, Source	integrin, alpha 7	9373	-0.043	0.0288	No
83	ACVR1	ACVR1 Entrez, Source	activin A receptor, type I	9665	-0.048	0.0110	No
84	ACTR3	ACTR3 Entrez, Source	ARP3 actin-related protein 3 homolog (yeast)	9733	-0.049	0.0102	No
85	FHL2	FHL2 Entrez, Source	four and a half LIM domains 2	9790	-0.050	0.0104	No
86	MATR3	MATR3 Entrez, Source	matrin 3	9874	-0.051	0.0086	No
87	POU3F4	POU3F4 Entrez, Source	POU domain, class 3, transcription factor 4	9971	-0.053	0.0060	No
88	PDLIM4	PDLIM4 Entrez, Source	PDZ and LIM domain 4	10146	-0.056	-0.0023	No
89	CRK	CRK Entrez, Source	v-crk sarcoma virus CT10 oncogene homolog (avian)	10328	-0.059	-0.0108	No
90	SYNCRIP	SYNCRIP Entrez, Source	synaptotagmin binding, cytoplasmic RNA interacting protein	10434	-0.061	-0.0134	No
91	CKM	CKM Entrez, Source	creatine kinase, muscle	10448	-0.061	-0.0091	No
92	PRKAB2	PRKAB2 Entrez, Source	protein kinase, AMP-activated, beta 2 non-catalytic subunit	10625	-0.065	-0.0167	No
93	PLN	PLN Entrez, Source	phospholamban	10671	-0.066	-0.0144	No
94	KCNMB1	KCNMB1 Entrez, Source	potassium large conductance calcium-activated channel, subfamily M, beta member 1	10764	-0.068	-0.0154	No
95	PNKP	PNKP Entrez, Source	polynucleotide kinase 3'-phosphatase	11117	-0.076	-0.0354	No
96	PDLIM7	PDLIM7 Entrez, Source	PDZ and LIM domain 7 (enigma)	11377	-0.083	-0.0477	No
97	MUS81	MUS81 Entrez, Source	MUS81 endonuclease homolog (S. cerevisiae)	11829	-0.097	-0.0733	No
98	MAPK14	MAPK14 Entrez, Source	mitogen-activated protein kinase 14	12051	-0.105	-0.0808	No
99	PHF12	PHF12 Entrez, Source	PHD finger protein 12	12208	-0.112	-0.0829	No
100	LCP1	LCP1 Entrez, Source	lymphocyte cytosolic protein 1 (L-plastin)	12229	-0.113	-0.0746	No
101	SIPA1	SIPA1 Entrez, Source	signal-induced proliferation-associated gene 1	12263	-0.115	-0.0671	No
102	DIXDC1	DIXDC1 Entrez, Source	DIX domain containing 1	12665	-0.138	-0.0853	No
103	SRD5A2	SRD5A2 Entrez, Source	steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)	12820	-0.155	-0.0834	No
104	DMD	DMD Entrez, Source	dystrophin (muscular dystrophy, Duchenne and Becker types)	12922	-0.168	-0.0764	No
105	SLC7A1	SLC7A1 Entrez, Source	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	13051	-0.198	-0.0688	No
106	STAT5B	STAT5B Entrez, Source	signal transducer and activator of transcription 5B	13204	-0.257	-0.0579	No
107	CA3	CA3 Entrez, Source	carbonic anhydrase III, muscle specific	13289	-0.373	-0.0317	No
108	GADD45G	GADD45G Entrez, Source	growth arrest and DNA-damage-inducible, gamma	13302	-0.408	0.0030	No