Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | VEGF_HUVEC_30MIN_UP |
| Enrichment Score (ES) | 0.6753754 |
| Normalized Enrichment Score (NES) | 1.7909105 |
| Nominal p-value | 0.0038910506 |
| FDR q-value | 0.033342794 |
| FWER p-Value | 0.976 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | EGR2 | EGR2 Entrez, Source | early growth response 2 (Krox-20 homolog, Drosophila) | 130 | 0.390 | 0.2085 | Yes |
| 2 | DUSP5 | DUSP5 Entrez, Source | dual specificity phosphatase 5 | 553 | 0.172 | 0.2729 | Yes |
| 3 | CYR61 | CYR61 Entrez, Source | cysteine-rich, angiogenic inducer, 61 | 559 | 0.171 | 0.3681 | Yes |
| 4 | SCRN1 | SCRN1 Entrez, Source | secernin 1 | 568 | 0.170 | 0.4626 | Yes |
| 5 | GZMK | GZMK Entrez, Source | granzyme K (granzyme 3; tryptase II) | 989 | 0.123 | 0.4996 | Yes |
| 6 | TRIB1 | TRIB1 Entrez, Source | tribbles homolog 1 (Drosophila) | 1067 | 0.116 | 0.5589 | Yes |
| 7 | DSCR1 | DSCR1 Entrez, Source | Down syndrome critical region gene 1 | 1098 | 0.115 | 0.6209 | Yes |
| 8 | NR4A1 | NR4A1 Entrez, Source | nuclear receptor subfamily 4, group A, member 1 | 1192 | 0.110 | 0.6754 | Yes |
| 9 | APOE | APOE Entrez, Source | apolipoprotein E | 2345 | 0.063 | 0.6243 | No |
| 10 | EGR1 | EGR1 Entrez, Source | early growth response 1 | 3274 | 0.043 | 0.5788 | No |
| 11 | EGR3 | EGR3 Entrez, Source | early growth response 3 | 4101 | 0.029 | 0.5328 | No |
| 12 | PPY | PPY Entrez, Source | pancreatic polypeptide | 5331 | 0.011 | 0.4466 | No |
| 13 | TAC1 | TAC1 Entrez, Source | tachykinin, precursor 1 (substance K, substance P, neurokinin 1, neurokinin 2, neuromedin L, neurokinin alpha, neuropeptide K, neuropeptide gamma) | 6828 | -0.008 | 0.3391 | No |
| 14 | HDC | HDC Entrez, Source | histidine decarboxylase | 7531 | -0.017 | 0.2959 | No |
| 15 | DBC1 | DBC1 Entrez, Source | deleted in bladder cancer 1 | 8614 | -0.032 | 0.2329 | No |
| 16 | C2 | C2 Entrez, Source | complement component 2 | 9498 | -0.045 | 0.1918 | No |
| 17 | VARS | VARS Entrez, Source | valyl-tRNA synthetase | 11312 | -0.082 | 0.1015 | No |
| 18 | ALAD | ALAD Entrez, Source | aminolevulinate, delta-, dehydratase | 11672 | -0.091 | 0.1253 | No |
