Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | VEGF_MMMEC_12HRS_UP |
| Enrichment Score (ES) | 0.7530819 |
| Normalized Enrichment Score (NES) | 2.0279396 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0038562901 |
| FWER p-Value | 0.124 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | COL1A2 | COL1A2 Entrez, Source | collagen, type I, alpha 2 | 3 | 1.046 | 0.2370 | Yes |
| 2 | MGP | MGP Entrez, Source | matrix Gla protein | 62 | 0.533 | 0.3535 | Yes |
| 3 | ANKRD1 | ANKRD1 Entrez, Source | ankyrin repeat domain 1 (cardiac muscle) | 63 | 0.532 | 0.4741 | Yes |
| 4 | CCL2 | CCL2 Entrez, Source | chemokine (C-C motif) ligand 2 | 76 | 0.477 | 0.5813 | Yes |
| 5 | BGN | BGN Entrez, Source | biglycan | 143 | 0.369 | 0.6602 | Yes |
| 6 | SGCE | SGCE Entrez, Source | sarcoglycan, epsilon | 484 | 0.185 | 0.6766 | Yes |
| 7 | IGFBP3 | IGFBP3 Entrez, Source | insulin-like growth factor binding protein 3 | 567 | 0.170 | 0.7091 | Yes |
| 8 | RHOB | RHOB Entrez, Source | ras homolog gene family, member B | 785 | 0.141 | 0.7248 | Yes |
| 9 | DIRC2 | DIRC2 Entrez, Source | disrupted in renal carcinoma 2 | 823 | 0.137 | 0.7531 | Yes |
| 10 | SULT1E1 | SULT1E1 Entrez, Source | sulfotransferase family 1E, estrogen-preferring, member 1 | 1236 | 0.108 | 0.7466 | No |
| 11 | AQP7 | AQP7 Entrez, Source | aquaporin 7 | 1686 | 0.085 | 0.7323 | No |
| 12 | FGFBP1 | FGFBP1 Entrez, Source | fibroblast growth factor binding protein 1 | 2072 | 0.071 | 0.7194 | No |
| 13 | THY1 | THY1 Entrez, Source | Thy-1 cell surface antigen | 2131 | 0.069 | 0.7307 | No |
| 14 | SP3 | SP3 Entrez, Source | Sp3 transcription factor | 2512 | 0.059 | 0.7156 | No |
| 15 | SDC4 | SDC4 Entrez, Source | syndecan 4 (amphiglycan, ryudocan) | 3195 | 0.045 | 0.6746 | No |
| 16 | MMP2 | MMP2 Entrez, Source | matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) | 3978 | 0.031 | 0.6228 | No |
| 17 | OXTR | OXTR Entrez, Source | oxytocin receptor | 5412 | 0.010 | 0.5174 | No |
| 18 | UBD | UBD Entrez, Source | ubiquitin D | 6622 | -0.006 | 0.4280 | No |
| 19 | TFPI2 | TFPI2 Entrez, Source | tissue factor pathway inhibitor 2 | 6771 | -0.008 | 0.4187 | No |
| 20 | ELN | ELN Entrez, Source | elastin (supravalvular aortic stenosis, Williams-Beuren syndrome) | 8687 | -0.033 | 0.2825 | No |
| 21 | SLC6A8 | SLC6A8 Entrez, Source | solute carrier family 6 (neurotransmitter transporter, creatine), member 8 | 11625 | -0.090 | 0.0823 | No |
| 22 | VCAM1 | VCAM1 Entrez, Source | vascular cell adhesion molecule 1 | 13085 | -0.205 | 0.0193 | No |
