Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | VIPPATHWAY |
| Enrichment Score (ES) | 0.669082 |
| Normalized Enrichment Score (NES) | 1.8465796 |
| Nominal p-value | 0.0036832413 |
| FDR q-value | 0.02374107 |
| FWER p-Value | 0.865 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | PRKAR2B | PRKAR2B Entrez, Source | protein kinase, cAMP-dependent, regulatory, type II, beta | 69 | 0.494 | 0.2479 | Yes |
| 2 | EGR2 | EGR2 Entrez, Source | early growth response 2 (Krox-20 homolog, Drosophila) | 130 | 0.390 | 0.4434 | Yes |
| 3 | PRKAR1B | PRKAR1B Entrez, Source | protein kinase, cAMP-dependent, regulatory, type I, beta | 512 | 0.181 | 0.5073 | Yes |
| 4 | NFKBIA | NFKBIA Entrez, Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha | 888 | 0.130 | 0.5459 | Yes |
| 5 | GNAQ | GNAQ Entrez, Source | guanine nucleotide binding protein (G protein), q polypeptide | 1323 | 0.103 | 0.5660 | Yes |
| 6 | SYT1 | SYT1 Entrez, Source | synaptotagmin I | 1335 | 0.102 | 0.6175 | Yes |
| 7 | VIPR2 | VIPR2 Entrez, Source | vasoactive intestinal peptide receptor 2 | 1343 | 0.102 | 0.6691 | Yes |
| 8 | CALM3 | CALM3 Entrez, Source | calmodulin 3 (phosphorylase kinase, delta) | 2619 | 0.057 | 0.6026 | No |
| 9 | PRKAR1A | PRKAR1A Entrez, Source | protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) | 2902 | 0.051 | 0.6074 | No |
| 10 | VIP | VIP Entrez, Source | vasoactive intestinal peptide | 3062 | 0.047 | 0.6197 | No |
| 11 | EGR3 | EGR3 Entrez, Source | early growth response 3 | 4101 | 0.029 | 0.5565 | No |
| 12 | MAP3K1 | MAP3K1 Entrez, Source | mitogen-activated protein kinase kinase kinase 1 | 4365 | 0.024 | 0.5492 | No |
| 13 | CALM2 | CALM2 Entrez, Source | calmodulin 2 (phosphorylase kinase, delta) | 4699 | 0.020 | 0.5343 | No |
| 14 | PPP3CB | PPP3CB Entrez, Source | protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta) | 5407 | 0.010 | 0.4861 | No |
| 15 | RELA | RELA Entrez, Source | v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian) | 6260 | -0.001 | 0.4229 | No |
| 16 | PPP3CC | PPP3CC Entrez, Source | protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform (calcineurin A gamma) | 6760 | -0.008 | 0.3894 | No |
| 17 | PPP3CA | PPP3CA Entrez, Source | protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha) | 7318 | -0.014 | 0.3550 | No |
| 18 | MYC | MYC Entrez, Source | v-myc myelocytomatosis viral oncogene homolog (avian) | 7715 | -0.020 | 0.3353 | No |
| 19 | CALM1 | CALM1 Entrez, Source | calmodulin 1 (phosphorylase kinase, delta) | 7735 | -0.020 | 0.3440 | No |
| 20 | PLCG1 | PLCG1 Entrez, Source | phospholipase C, gamma 1 | 8898 | -0.036 | 0.2753 | No |
| 21 | NFKB1 | NFKB1 Entrez, Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (p105) | 9252 | -0.041 | 0.2697 | No |
| 22 | PRKAR2A | PRKAR2A Entrez, Source | protein kinase, cAMP-dependent, regulatory, type II, alpha | 10971 | -0.073 | 0.1780 | No |
