Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_72h.class.cls
#double_gel_8d_versus_double_gel_72h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in classdouble_gel_8d
GeneSetYATGNWAAT_V$OCT_C
Enrichment Score (ES)0.48762745
Normalized Enrichment Score (NES)1.875856
Nominal p-value0.0
FDR q-value0.019652432
FWER p-Value0.75
Table: GSEA Results Summary



Fig 1: Enrichment plot: YATGNWAAT_V$OCT_C   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LPLLPL
Entrez,  Source
lipoprotein lipase240.6800.0535Yes
2ADMADM
Entrez,  Source
adrenomedullin340.6490.1055Yes
3MAFMAF
Entrez,  Source
v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)730.4840.1420Yes
4SLC24A3SLC24A3
Entrez,  Source
solute carrier family 24 (sodium/potassium/calcium exchanger), member 3810.4670.1794Yes
5EGR2EGR2
Entrez,  Source
early growth response 2 (Krox-20 homolog, Drosophila)1300.3900.2075Yes
6FOXP1FOXP1
Entrez,  Source
forkhead box P11740.3430.2321Yes
7PPP2R3APPP2R3A
Entrez,  Source
protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha2220.3050.2533Yes
8PFKFB1PFKFB1
Entrez,  Source
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 13110.2440.2665Yes
9ACTG2ACTG2
Entrez,  Source
actin, gamma 2, smooth muscle, enteric3910.2120.2778Yes
10DPYSL3DPYSL3
Entrez,  Source
dihydropyrimidinase-like 34990.1820.2845Yes
11CUTL1CUTL1
Entrez,  Source
cut-like 1, CCAAT displacement protein (Drosophila)5160.1800.2979Yes
12IGSF4IGSF4
Entrez,  Source
immunoglobulin superfamily, member 45170.1800.3125Yes
13ADORA1ADORA1
Entrez,  Source
adenosine A1 receptor5470.1730.3243Yes
14RAB3CRAB3C
Entrez,  Source
RAB3C, member RAS oncogene family5490.1720.3382Yes
15CYR61CYR61
Entrez,  Source
cysteine-rich, angiogenic inducer, 615590.1710.3514Yes
16SCRN1SCRN1
Entrez,  Source
secernin 15680.1700.3647Yes
17LMO3LMO3
Entrez,  Source
LIM domain only 3 (rhombotin-like 2)5730.1690.3781Yes
18GCM1GCM1
Entrez,  Source
glial cells missing homolog 1 (Drosophila)6230.1620.3875Yes
19SLC10A2SLC10A2
Entrez,  Source
solute carrier family 10 (sodium/bile acid cotransporter family), member 26750.1530.3961Yes
20CSF3CSF3
Entrez,  Source
colony stimulating factor 3 (granulocyte)6850.1520.4078Yes
21OTX2OTX2
Entrez,  Source
orthodenticle homolog 2 (Drosophila)7080.1500.4183Yes
22NFIANFIA
Entrez,  Source
nuclear factor I/A7430.1450.4275Yes
23RHOBRHOB
Entrez,  Source
ras homolog gene family, member B7850.1410.4359Yes
24MAP1BMAP1B
Entrez,  Source
microtubule-associated protein 1B8160.1380.4448Yes
25LMO4LMO4
Entrez,  Source
LIM domain only 48270.1360.4551Yes
26PITX2PITX2
Entrez,  Source
paired-like homeodomain transcription factor 28500.1340.4644Yes
27IL17FIL17F
Entrez,  Source
interleukin 17F9460.1250.4674Yes
28DSCR1DSCR1
Entrez,  Source
Down syndrome critical region gene 110980.1150.4653Yes
29ALDH1A1ALDH1A1
Entrez,  Source
aldehyde dehydrogenase 1 family, member A111830.1100.4679Yes
30LPHN1LPHN1
Entrez,  Source
latrophilin 112710.1050.4698Yes
31DLGAP4DLGAP4
Entrez,  Source
discs, large (Drosophila) homolog-associated protein 413170.1030.4748Yes
32SYT1SYT1
Entrez,  Source
synaptotagmin I13350.1020.4818Yes
33SFRP1SFRP1
Entrez,  Source
secreted frizzled-related protein 113670.1000.4876Yes
34KCNIP4KCNIP4
Entrez,  Source
Kv channel interacting protein 417050.0850.4690No
35NEUROG1NEUROG1
Entrez,  Source
neurogenin 118870.0770.4615No
36FGF12FGF12
Entrez,  Source
fibroblast growth factor 1219470.0750.4631No
37FZD2FZD2
Entrez,  Source
frizzled homolog 2 (Drosophila)20190.0730.4636No
38TRDNTRDN
Entrez,  Source
triadin20770.0710.4650No
39TBXAS1TBXAS1
Entrez,  Source
thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)21430.0690.4657No
40TAS2R13TAS2R13
Entrez,  Source
taste receptor, type 2, member 1322020.0670.4668No
41ING1ING1
Entrez,  Source
inhibitor of growth family, member 122890.0650.4655No
42FKRPFKRP
Entrez,  Source
fukutin related protein23350.0640.4673No
43NUDT6NUDT6
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 625410.0590.4565No
44GPC4GPC4
Entrez,  Source
glypican 425530.0580.4604No
45SLC6A15SLC6A15
Entrez,  Source
solute carrier family 6, member 1525850.0580.4628No
46POLMPOLM
Entrez,  Source
polymerase (DNA directed), mu27220.0540.4569No
47MRASMRAS
Entrez,  Source
muscle RAS oncogene homolog27740.0530.4573No
48NR4A3NR4A3
Entrez,  Source
nuclear receptor subfamily 4, group A, member 329740.0490.4462No
49DLX1DLX1
Entrez,  Source
distal-less homeobox 130000.0480.4483No
50DCNDCN
Entrez,  Source
decorin30290.0480.4500No
51SFRP2SFRP2
Entrez,  Source
secreted frizzled-related protein 230410.0480.4531No
52H3F3BH3F3B
Entrez,  Source
H3 histone, family 3B (H3.3B)30950.0470.4529No
53GBX2GBX2
Entrez,  Source
gastrulation brain homeobox 232340.0440.4460No
54NUDT3NUDT3
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 332900.0430.4453No
55GNB3GNB3
Entrez,  Source
guanine nucleotide binding protein (G protein), beta polypeptide 333600.0410.4434No
56FGF20FGF20
Entrez,  Source
fibroblast growth factor 2034080.0400.4431No
57GDNFGDNF
Entrez,  Source
glial cell derived neurotrophic factor34130.0400.4461No
58EGLN2EGLN2
Entrez,  Source
egl nine homolog 2 (C. elegans)34810.0390.4442No
59YWHABYWHAB
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide36790.0360.4321No
60RESTREST
Entrez,  Source
RE1-silencing transcription factor37370.0350.4306No
61BACE2BACE2
Entrez,  Source
beta-site APP-cleaving enzyme 237400.0350.4333No
62ZFHX1BZFHX1B
Entrez,  Source
zinc finger homeobox 1b38020.0330.4314No
63CELSR2CELSR2
Entrez,  Source
cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)38800.0320.4282No
64SLC17A7SLC17A7
Entrez,  Source
solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 742820.0260.3998No
65STMN1STMN1
Entrez,  Source
stathmin 1/oncoprotein 1842930.0260.4012No
66CDK2CDK2
Entrez,  Source
cyclin-dependent kinase 243100.0250.4020No
67ITPR3ITPR3
Entrez,  Source
inositol 1,4,5-triphosphate receptor, type 343440.0250.4015No
68AMBNAMBN
Entrez,  Source
ameloblastin (enamel matrix protein)45870.0210.3849No
69RAB26RAB26
Entrez,  Source
RAB26, member RAS oncogene family46480.0200.3820No
70TAS2R7TAS2R7
Entrez,  Source
taste receptor, type 2, member 746590.0200.3829No
71POU1F1POU1F1
Entrez,  Source
POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1)47410.0190.3783No
72HPCAL4HPCAL4
Entrez,  Source
hippocalcin like 448680.0170.3701No
73DLL3DLL3
Entrez,  Source
delta-like 3 (Drosophila)51370.0130.3509No
74PRRX1PRRX1
Entrez,  Source
paired related homeobox 151890.0130.3481No
75DLL1DLL1
Entrez,  Source
delta-like 1 (Drosophila)54030.0100.3327No
76TSC1TSC1
Entrez,  Source
tuberous sclerosis 154100.0100.3330No
77FZD4FZD4
Entrez,  Source
frizzled homolog 4 (Drosophila)54950.0080.3274No
78LHX3LHX3
Entrez,  Source
LIM homeobox 355600.0070.3231No
79GRIN3AGRIN3A
Entrez,  Source
glutamate receptor, ionotropic, N-methyl-D-aspartate 3A55970.0070.3210No
80CACNG2CACNG2
Entrez,  Source
calcium channel, voltage-dependent, gamma subunit 256640.0060.3165No
81NRXN1NRXN1
Entrez,  Source
neurexin 156830.0060.3156No
82TECTEC
Entrez,  Source
tec protein tyrosine kinase57240.0050.3130No
83CNOT2CNOT2
Entrez,  Source
CCR4-NOT transcription complex, subunit 257430.0050.3120No
84COL23A1COL23A1
Entrez,  Source
collagen, type XXIII, alpha 158700.0040.3028No
85DGKGDGKG
Entrez,  Source
diacylglycerol kinase, gamma 90kDa59340.0030.2983No
86PCDH8PCDH8
Entrez,  Source
protocadherin 859870.0020.2945No
87KCNN3KCNN3
Entrez,  Source
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 360080.0020.2932No
88TOP1TOP1
Entrez,  Source
topoisomerase (DNA) I6189-0.0000.2795No
89NRXN3NRXN3
Entrez,  Source
neurexin 36247-0.0010.2753No
90ATP6V0CATP6V0C
Entrez,  Source
ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c6333-0.0020.2691No
91ESRRAESRRA
Entrez,  Source
estrogen-related receptor alpha6415-0.0030.2632No
92JUNDJUND
Entrez,  Source
jun D proto-oncogene6457-0.0040.2604No
93NRASNRAS
Entrez,  Source
neuroblastoma RAS viral (v-ras) oncogene homolog6534-0.0050.2550No
94ALDH1A2ALDH1A2
Entrez,  Source
aldehyde dehydrogenase 1 family, member A26558-0.0050.2537No
95LRRN1LRRN1
Entrez,  Source
leucine rich repeat neuronal 16617-0.0060.2498No
96HOXA5HOXA5
Entrez,  Source
homeobox A56663-0.0070.2469No
97SEMA6CSEMA6C
Entrez,  Source
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C6673-0.0070.2468No
98PANK4PANK4
Entrez,  Source
pantothenate kinase 46721-0.0070.2438No
99ITGB3BPITGB3BP
Entrez,  Source
integrin beta 3 binding protein (beta3-endonexin)6849-0.0090.2349No
100GPR85GPR85
Entrez,  Source
G protein-coupled receptor 856883-0.0090.2332No
101XYLT2XYLT2
Entrez,  Source
xylosyltransferase II6905-0.0090.2323No
102ERGERG
Entrez,  Source
v-ets erythroblastosis virus E26 oncogene homolog (avian)6929-0.0100.2314No
103NGFRAP1NGFRAP1
Entrez,  Source
nerve growth factor receptor (TNFRSF16) associated protein 17029-0.0110.2248No
104CRYZL1CRYZL1
Entrez,  Source
crystallin, zeta (quinone reductase)-like 17045-0.0110.2246No
105ARHGAP4ARHGAP4
Entrez,  Source
Rho GTPase activating protein 47114-0.0120.2204No
106NOS1NOS1
Entrez,  Source
nitric oxide synthase 1 (neuronal)7163-0.0130.2178No
107TCF4TCF4
Entrez,  Source
transcription factor 47176-0.0130.2179No
108RAB5ARAB5A
Entrez,  Source
RAB5A, member RAS oncogene family7248-0.0140.2136No
109MTUS1MTUS1
Entrez,  Source
mitochondrial tumor suppressor 17445-0.0160.2001No
110ADORA2AADORA2A
Entrez,  Source
adenosine A2a receptor7525-0.0170.1955No
111ATP1B2ATP1B2
Entrez,  Source
ATPase, Na+/K+ transporting, beta 2 polypeptide7724-0.0200.1821No
112ALKALK
Entrez,  Source
anaplastic lymphoma kinase (Ki-1)7874-0.0220.1725No
113DNAH7DNAH7
Entrez,  Source
dynein, axonemal, heavy chain 78067-0.0240.1600No
114THRATHRA
Entrez,  Source
thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian)8105-0.0250.1592No
115CCND1CCND1
Entrez,  Source
cyclin D18524-0.0310.1300No
116TCF2TCF2
Entrez,  Source
transcription factor 2, hepatic; LF-B3; variant hepatic nuclear factor8766-0.0340.1146No
117PAX6PAX6
Entrez,  Source
paired box gene 6 (aniridia, keratitis)8836-0.0350.1122No
118TSNAXTSNAX
Entrez,  Source
translin-associated factor X8938-0.0370.1075No
119GPR4GPR4
Entrez,  Source
G protein-coupled receptor 48960-0.0370.1090No
120TMEM24TMEM24
Entrez,  Source
transmembrane protein 249074-0.0380.1035No
121TNNI1TNNI1
Entrez,  Source
troponin I type 1 (skeletal, slow)9147-0.0390.1013No
122PLCB2PLCB2
Entrez,  Source
phospholipase C, beta 29233-0.0410.0981No
123MID1MID1
Entrez,  Source
midline 1 (Opitz/BBB syndrome)9243-0.0410.1008No
124ISL1ISL1
Entrez,  Source
ISL1 transcription factor, LIM/homeodomain, (islet-1)9285-0.0420.1010No
125RNASE4RNASE4
Entrez,  Source
ribonuclease, RNase A family, 49382-0.0430.0973No
126SFRS15SFRS15
Entrez,  Source
splicing factor, arginine/serine-rich 159439-0.0440.0966No
127ANK3ANK3
Entrez,  Source
ankyrin 3, node of Ranvier (ankyrin G)9444-0.0440.0999No
128PHC2PHC2
Entrez,  Source
polyhomeotic homolog 2 (Drosophila)9654-0.0480.0879No
129NXPH1NXPH1
Entrez,  Source
neurexophilin 19817-0.0500.0797No
130POU3F4POU3F4
Entrez,  Source
POU domain, class 3, transcription factor 49971-0.0530.0725No
131POU2F3POU2F3
Entrez,  Source
POU domain, class 2, transcription factor 310351-0.0590.0486No
132PTENPTEN
Entrez,  Source
phosphatase and tensin homolog (mutated in multiple advanced cancers 1)10692-0.0660.0281No
133SLC18A3SLC18A3
Entrez,  Source
solute carrier family 18 (vesicular acetylcholine), member 310815-0.0690.0245No
134PCYT1BPCYT1B
Entrez,  Source
phosphate cytidylyltransferase 1, choline, beta10932-0.0720.0215No
135CRISP1CRISP1
Entrez,  Source
cysteine-rich secretory protein 111196-0.0780.0079No
136ACBD4ACBD4
Entrez,  Source
acyl-Coenzyme A binding domain containing 411202-0.0780.0139No
137ADNPADNP
Entrez,  Source
activity-dependent neuroprotector11378-0.0830.0074No
138SYNPRSYNPR
Entrez,  Source
synaptoporin11391-0.0840.0133No
139ITSN1ITSN1
Entrez,  Source
intersectin 1 (SH3 domain protein)11645-0.0900.0015No
140GRID2GRID2
Entrez,  Source
glutamate receptor, ionotropic, delta 211782-0.095-0.0011No
141BZW2BZW2
Entrez,  Source
basic leucine zipper and W2 domains 211874-0.098-0.0001No
142CD79BCD79B
Entrez,  Source
CD79b molecule, immunoglobulin-associated beta11950-0.1010.0024No
143BAT2BAT2
Entrez,  Source
HLA-B associated transcript 212105-0.107-0.0005No
144LYNLYN
Entrez,  Source
v-yes-1 Yamaguchi sarcoma viral related oncogene homolog12283-0.115-0.0045No
145AKT2AKT2
Entrez,  Source
v-akt murine thymoma viral oncogene homolog 212338-0.1180.0010No
146BST2BST2
Entrez,  Source
bone marrow stromal cell antigen 212353-0.1190.0095No
147ABTB2ABTB2
Entrez,  Source
ankyrin repeat and BTB (POZ) domain containing 212516-0.1290.0078No
148ARHGEF12ARHGEF12
Entrez,  Source
Rho guanine nucleotide exchange factor (GEF) 1212697-0.1410.0056No
149RARBRARB
Entrez,  Source
retinoic acid receptor, beta12717-0.1430.0158No
150ID2ID2
Entrez,  Source
inhibitor of DNA binding 2, dominant negative helix-loop-helix protein13029-0.1930.0079No
151SH3GL3SH3GL3
Entrez,  Source
SH3-domain GRB2-like 313033-0.1940.0234No
Table: GSEA details [plain text format]



Fig 2: YATGNWAAT_V$OCT_C   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: YATGNWAAT_V$OCT_C: Random ES distribution   
Gene set null distribution of ES for YATGNWAAT_V$OCT_C