Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
Upregulated in class | double_gel_8d |
GeneSet | YATGNWAAT_V$OCT_C |
Enrichment Score (ES) | 0.48762745 |
Normalized Enrichment Score (NES) | 1.875856 |
Nominal p-value | 0.0 |
FDR q-value | 0.019652432 |
FWER p-Value | 0.75 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | LPL | LPL Entrez,  Source | lipoprotein lipase | 24 | 0.680 | 0.0535 | Yes |
2 | ADM | ADM Entrez,  Source | adrenomedullin | 34 | 0.649 | 0.1055 | Yes |
3 | MAF | MAF Entrez,  Source | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | 73 | 0.484 | 0.1420 | Yes |
4 | SLC24A3 | SLC24A3 Entrez,  Source | solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 | 81 | 0.467 | 0.1794 | Yes |
5 | EGR2 | EGR2 Entrez,  Source | early growth response 2 (Krox-20 homolog, Drosophila) | 130 | 0.390 | 0.2075 | Yes |
6 | FOXP1 | FOXP1 Entrez,  Source | forkhead box P1 | 174 | 0.343 | 0.2321 | Yes |
7 | PPP2R3A | PPP2R3A Entrez,  Source | protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha | 222 | 0.305 | 0.2533 | Yes |
8 | PFKFB1 | PFKFB1 Entrez,  Source | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 | 311 | 0.244 | 0.2665 | Yes |
9 | ACTG2 | ACTG2 Entrez,  Source | actin, gamma 2, smooth muscle, enteric | 391 | 0.212 | 0.2778 | Yes |
10 | DPYSL3 | DPYSL3 Entrez,  Source | dihydropyrimidinase-like 3 | 499 | 0.182 | 0.2845 | Yes |
11 | CUTL1 | CUTL1 Entrez,  Source | cut-like 1, CCAAT displacement protein (Drosophila) | 516 | 0.180 | 0.2979 | Yes |
12 | IGSF4 | IGSF4 Entrez,  Source | immunoglobulin superfamily, member 4 | 517 | 0.180 | 0.3125 | Yes |
13 | ADORA1 | ADORA1 Entrez,  Source | adenosine A1 receptor | 547 | 0.173 | 0.3243 | Yes |
14 | RAB3C | RAB3C Entrez,  Source | RAB3C, member RAS oncogene family | 549 | 0.172 | 0.3382 | Yes |
15 | CYR61 | CYR61 Entrez,  Source | cysteine-rich, angiogenic inducer, 61 | 559 | 0.171 | 0.3514 | Yes |
16 | SCRN1 | SCRN1 Entrez,  Source | secernin 1 | 568 | 0.170 | 0.3647 | Yes |
17 | LMO3 | LMO3 Entrez,  Source | LIM domain only 3 (rhombotin-like 2) | 573 | 0.169 | 0.3781 | Yes |
18 | GCM1 | GCM1 Entrez,  Source | glial cells missing homolog 1 (Drosophila) | 623 | 0.162 | 0.3875 | Yes |
19 | SLC10A2 | SLC10A2 Entrez,  Source | solute carrier family 10 (sodium/bile acid cotransporter family), member 2 | 675 | 0.153 | 0.3961 | Yes |
20 | CSF3 | CSF3 Entrez,  Source | colony stimulating factor 3 (granulocyte) | 685 | 0.152 | 0.4078 | Yes |
21 | OTX2 | OTX2 Entrez,  Source | orthodenticle homolog 2 (Drosophila) | 708 | 0.150 | 0.4183 | Yes |
22 | NFIA | NFIA Entrez,  Source | nuclear factor I/A | 743 | 0.145 | 0.4275 | Yes |
23 | RHOB | RHOB Entrez,  Source | ras homolog gene family, member B | 785 | 0.141 | 0.4359 | Yes |
24 | MAP1B | MAP1B Entrez,  Source | microtubule-associated protein 1B | 816 | 0.138 | 0.4448 | Yes |
25 | LMO4 | LMO4 Entrez,  Source | LIM domain only 4 | 827 | 0.136 | 0.4551 | Yes |
26 | PITX2 | PITX2 Entrez,  Source | paired-like homeodomain transcription factor 2 | 850 | 0.134 | 0.4644 | Yes |
27 | IL17F | IL17F Entrez,  Source | interleukin 17F | 946 | 0.125 | 0.4674 | Yes |
28 | DSCR1 | DSCR1 Entrez,  Source | Down syndrome critical region gene 1 | 1098 | 0.115 | 0.4653 | Yes |
29 | ALDH1A1 | ALDH1A1 Entrez,  Source | aldehyde dehydrogenase 1 family, member A1 | 1183 | 0.110 | 0.4679 | Yes |
30 | LPHN1 | LPHN1 Entrez,  Source | latrophilin 1 | 1271 | 0.105 | 0.4698 | Yes |
31 | DLGAP4 | DLGAP4 Entrez,  Source | discs, large (Drosophila) homolog-associated protein 4 | 1317 | 0.103 | 0.4748 | Yes |
32 | SYT1 | SYT1 Entrez,  Source | synaptotagmin I | 1335 | 0.102 | 0.4818 | Yes |
33 | SFRP1 | SFRP1 Entrez,  Source | secreted frizzled-related protein 1 | 1367 | 0.100 | 0.4876 | Yes |
34 | KCNIP4 | KCNIP4 Entrez,  Source | Kv channel interacting protein 4 | 1705 | 0.085 | 0.4690 | No |
35 | NEUROG1 | NEUROG1 Entrez,  Source | neurogenin 1 | 1887 | 0.077 | 0.4615 | No |
36 | FGF12 | FGF12 Entrez,  Source | fibroblast growth factor 12 | 1947 | 0.075 | 0.4631 | No |
37 | FZD2 | FZD2 Entrez,  Source | frizzled homolog 2 (Drosophila) | 2019 | 0.073 | 0.4636 | No |
38 | TRDN | TRDN Entrez,  Source | triadin | 2077 | 0.071 | 0.4650 | No |
39 | TBXAS1 | TBXAS1 Entrez,  Source | thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A) | 2143 | 0.069 | 0.4657 | No |
40 | TAS2R13 | TAS2R13 Entrez,  Source | taste receptor, type 2, member 13 | 2202 | 0.067 | 0.4668 | No |
41 | ING1 | ING1 Entrez,  Source | inhibitor of growth family, member 1 | 2289 | 0.065 | 0.4655 | No |
42 | FKRP | FKRP Entrez,  Source | fukutin related protein | 2335 | 0.064 | 0.4673 | No |
43 | NUDT6 | NUDT6 Entrez,  Source | nudix (nucleoside diphosphate linked moiety X)-type motif 6 | 2541 | 0.059 | 0.4565 | No |
44 | GPC4 | GPC4 Entrez,  Source | glypican 4 | 2553 | 0.058 | 0.4604 | No |
45 | SLC6A15 | SLC6A15 Entrez,  Source | solute carrier family 6, member 15 | 2585 | 0.058 | 0.4628 | No |
46 | POLM | POLM Entrez,  Source | polymerase (DNA directed), mu | 2722 | 0.054 | 0.4569 | No |
47 | MRAS | MRAS Entrez,  Source | muscle RAS oncogene homolog | 2774 | 0.053 | 0.4573 | No |
48 | NR4A3 | NR4A3 Entrez,  Source | nuclear receptor subfamily 4, group A, member 3 | 2974 | 0.049 | 0.4462 | No |
49 | DLX1 | DLX1 Entrez,  Source | distal-less homeobox 1 | 3000 | 0.048 | 0.4483 | No |
50 | DCN | DCN Entrez,  Source | decorin | 3029 | 0.048 | 0.4500 | No |
51 | SFRP2 | SFRP2 Entrez,  Source | secreted frizzled-related protein 2 | 3041 | 0.048 | 0.4531 | No |
52 | H3F3B | H3F3B Entrez,  Source | H3 histone, family 3B (H3.3B) | 3095 | 0.047 | 0.4529 | No |
53 | GBX2 | GBX2 Entrez,  Source | gastrulation brain homeobox 2 | 3234 | 0.044 | 0.4460 | No |
54 | NUDT3 | NUDT3 Entrez,  Source | nudix (nucleoside diphosphate linked moiety X)-type motif 3 | 3290 | 0.043 | 0.4453 | No |
55 | GNB3 | GNB3 Entrez,  Source | guanine nucleotide binding protein (G protein), beta polypeptide 3 | 3360 | 0.041 | 0.4434 | No |
56 | FGF20 | FGF20 Entrez,  Source | fibroblast growth factor 20 | 3408 | 0.040 | 0.4431 | No |
57 | GDNF | GDNF Entrez,  Source | glial cell derived neurotrophic factor | 3413 | 0.040 | 0.4461 | No |
58 | EGLN2 | EGLN2 Entrez,  Source | egl nine homolog 2 (C. elegans) | 3481 | 0.039 | 0.4442 | No |
59 | YWHAB | YWHAB Entrez,  Source | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide | 3679 | 0.036 | 0.4321 | No |
60 | REST | REST Entrez,  Source | RE1-silencing transcription factor | 3737 | 0.035 | 0.4306 | No |
61 | BACE2 | BACE2 Entrez,  Source | beta-site APP-cleaving enzyme 2 | 3740 | 0.035 | 0.4333 | No |
62 | ZFHX1B | ZFHX1B Entrez,  Source | zinc finger homeobox 1b | 3802 | 0.033 | 0.4314 | No |
63 | CELSR2 | CELSR2 Entrez,  Source | cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila) | 3880 | 0.032 | 0.4282 | No |
64 | SLC17A7 | SLC17A7 Entrez,  Source | solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 | 4282 | 0.026 | 0.3998 | No |
65 | STMN1 | STMN1 Entrez,  Source | stathmin 1/oncoprotein 18 | 4293 | 0.026 | 0.4012 | No |
66 | CDK2 | CDK2 Entrez,  Source | cyclin-dependent kinase 2 | 4310 | 0.025 | 0.4020 | No |
67 | ITPR3 | ITPR3 Entrez,  Source | inositol 1,4,5-triphosphate receptor, type 3 | 4344 | 0.025 | 0.4015 | No |
68 | AMBN | AMBN Entrez,  Source | ameloblastin (enamel matrix protein) | 4587 | 0.021 | 0.3849 | No |
69 | RAB26 | RAB26 Entrez,  Source | RAB26, member RAS oncogene family | 4648 | 0.020 | 0.3820 | No |
70 | TAS2R7 | TAS2R7 Entrez,  Source | taste receptor, type 2, member 7 | 4659 | 0.020 | 0.3829 | No |
71 | POU1F1 | POU1F1 Entrez,  Source | POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1) | 4741 | 0.019 | 0.3783 | No |
72 | HPCAL4 | HPCAL4 Entrez,  Source | hippocalcin like 4 | 4868 | 0.017 | 0.3701 | No |
73 | DLL3 | DLL3 Entrez,  Source | delta-like 3 (Drosophila) | 5137 | 0.013 | 0.3509 | No |
74 | PRRX1 | PRRX1 Entrez,  Source | paired related homeobox 1 | 5189 | 0.013 | 0.3481 | No |
75 | DLL1 | DLL1 Entrez,  Source | delta-like 1 (Drosophila) | 5403 | 0.010 | 0.3327 | No |
76 | TSC1 | TSC1 Entrez,  Source | tuberous sclerosis 1 | 5410 | 0.010 | 0.3330 | No |
77 | FZD4 | FZD4 Entrez,  Source | frizzled homolog 4 (Drosophila) | 5495 | 0.008 | 0.3274 | No |
78 | LHX3 | LHX3 Entrez,  Source | LIM homeobox 3 | 5560 | 0.007 | 0.3231 | No |
79 | GRIN3A | GRIN3A Entrez,  Source | glutamate receptor, ionotropic, N-methyl-D-aspartate 3A | 5597 | 0.007 | 0.3210 | No |
80 | CACNG2 | CACNG2 Entrez,  Source | calcium channel, voltage-dependent, gamma subunit 2 | 5664 | 0.006 | 0.3165 | No |
81 | NRXN1 | NRXN1 Entrez,  Source | neurexin 1 | 5683 | 0.006 | 0.3156 | No |
82 | TEC | TEC Entrez,  Source | tec protein tyrosine kinase | 5724 | 0.005 | 0.3130 | No |
83 | CNOT2 | CNOT2 Entrez,  Source | CCR4-NOT transcription complex, subunit 2 | 5743 | 0.005 | 0.3120 | No |
84 | COL23A1 | COL23A1 Entrez,  Source | collagen, type XXIII, alpha 1 | 5870 | 0.004 | 0.3028 | No |
85 | DGKG | DGKG Entrez,  Source | diacylglycerol kinase, gamma 90kDa | 5934 | 0.003 | 0.2983 | No |
86 | PCDH8 | PCDH8 Entrez,  Source | protocadherin 8 | 5987 | 0.002 | 0.2945 | No |
87 | KCNN3 | KCNN3 Entrez,  Source | potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 | 6008 | 0.002 | 0.2932 | No |
88 | TOP1 | TOP1 Entrez,  Source | topoisomerase (DNA) I | 6189 | -0.000 | 0.2795 | No |
89 | NRXN3 | NRXN3 Entrez,  Source | neurexin 3 | 6247 | -0.001 | 0.2753 | No |
90 | ATP6V0C | ATP6V0C Entrez,  Source | ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c | 6333 | -0.002 | 0.2691 | No |
91 | ESRRA | ESRRA Entrez,  Source | estrogen-related receptor alpha | 6415 | -0.003 | 0.2632 | No |
92 | JUND | JUND Entrez,  Source | jun D proto-oncogene | 6457 | -0.004 | 0.2604 | No |
93 | NRAS | NRAS Entrez,  Source | neuroblastoma RAS viral (v-ras) oncogene homolog | 6534 | -0.005 | 0.2550 | No |
94 | ALDH1A2 | ALDH1A2 Entrez,  Source | aldehyde dehydrogenase 1 family, member A2 | 6558 | -0.005 | 0.2537 | No |
95 | LRRN1 | LRRN1 Entrez,  Source | leucine rich repeat neuronal 1 | 6617 | -0.006 | 0.2498 | No |
96 | HOXA5 | HOXA5 Entrez,  Source | homeobox A5 | 6663 | -0.007 | 0.2469 | No |
97 | SEMA6C | SEMA6C Entrez,  Source | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C | 6673 | -0.007 | 0.2468 | No |
98 | PANK4 | PANK4 Entrez,  Source | pantothenate kinase 4 | 6721 | -0.007 | 0.2438 | No |
99 | ITGB3BP | ITGB3BP Entrez,  Source | integrin beta 3 binding protein (beta3-endonexin) | 6849 | -0.009 | 0.2349 | No |
100 | GPR85 | GPR85 Entrez,  Source | G protein-coupled receptor 85 | 6883 | -0.009 | 0.2332 | No |
101 | XYLT2 | XYLT2 Entrez,  Source | xylosyltransferase II | 6905 | -0.009 | 0.2323 | No |
102 | ERG | ERG Entrez,  Source | v-ets erythroblastosis virus E26 oncogene homolog (avian) | 6929 | -0.010 | 0.2314 | No |
103 | NGFRAP1 | NGFRAP1 Entrez,  Source | nerve growth factor receptor (TNFRSF16) associated protein 1 | 7029 | -0.011 | 0.2248 | No |
104 | CRYZL1 | CRYZL1 Entrez,  Source | crystallin, zeta (quinone reductase)-like 1 | 7045 | -0.011 | 0.2246 | No |
105 | ARHGAP4 | ARHGAP4 Entrez,  Source | Rho GTPase activating protein 4 | 7114 | -0.012 | 0.2204 | No |
106 | NOS1 | NOS1 Entrez,  Source | nitric oxide synthase 1 (neuronal) | 7163 | -0.013 | 0.2178 | No |
107 | TCF4 | TCF4 Entrez,  Source | transcription factor 4 | 7176 | -0.013 | 0.2179 | No |
108 | RAB5A | RAB5A Entrez,  Source | RAB5A, member RAS oncogene family | 7248 | -0.014 | 0.2136 | No |
109 | MTUS1 | MTUS1 Entrez,  Source | mitochondrial tumor suppressor 1 | 7445 | -0.016 | 0.2001 | No |
110 | ADORA2A | ADORA2A Entrez,  Source | adenosine A2a receptor | 7525 | -0.017 | 0.1955 | No |
111 | ATP1B2 | ATP1B2 Entrez,  Source | ATPase, Na+/K+ transporting, beta 2 polypeptide | 7724 | -0.020 | 0.1821 | No |
112 | ALK | ALK Entrez,  Source | anaplastic lymphoma kinase (Ki-1) | 7874 | -0.022 | 0.1725 | No |
113 | DNAH7 | DNAH7 Entrez,  Source | dynein, axonemal, heavy chain 7 | 8067 | -0.024 | 0.1600 | No |
114 | THRA | THRA Entrez,  Source | thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) | 8105 | -0.025 | 0.1592 | No |
115 | CCND1 | CCND1 Entrez,  Source | cyclin D1 | 8524 | -0.031 | 0.1300 | No |
116 | TCF2 | TCF2 Entrez,  Source | transcription factor 2, hepatic; LF-B3; variant hepatic nuclear factor | 8766 | -0.034 | 0.1146 | No |
117 | PAX6 | PAX6 Entrez,  Source | paired box gene 6 (aniridia, keratitis) | 8836 | -0.035 | 0.1122 | No |
118 | TSNAX | TSNAX Entrez,  Source | translin-associated factor X | 8938 | -0.037 | 0.1075 | No |
119 | GPR4 | GPR4 Entrez,  Source | G protein-coupled receptor 4 | 8960 | -0.037 | 0.1090 | No |
120 | TMEM24 | TMEM24 Entrez,  Source | transmembrane protein 24 | 9074 | -0.038 | 0.1035 | No |
121 | TNNI1 | TNNI1 Entrez,  Source | troponin I type 1 (skeletal, slow) | 9147 | -0.039 | 0.1013 | No |
122 | PLCB2 | PLCB2 Entrez,  Source | phospholipase C, beta 2 | 9233 | -0.041 | 0.0981 | No |
123 | MID1 | MID1 Entrez,  Source | midline 1 (Opitz/BBB syndrome) | 9243 | -0.041 | 0.1008 | No |
124 | ISL1 | ISL1 Entrez,  Source | ISL1 transcription factor, LIM/homeodomain, (islet-1) | 9285 | -0.042 | 0.1010 | No |
125 | RNASE4 | RNASE4 Entrez,  Source | ribonuclease, RNase A family, 4 | 9382 | -0.043 | 0.0973 | No |
126 | SFRS15 | SFRS15 Entrez,  Source | splicing factor, arginine/serine-rich 15 | 9439 | -0.044 | 0.0966 | No |
127 | ANK3 | ANK3 Entrez,  Source | ankyrin 3, node of Ranvier (ankyrin G) | 9444 | -0.044 | 0.0999 | No |
128 | PHC2 | PHC2 Entrez,  Source | polyhomeotic homolog 2 (Drosophila) | 9654 | -0.048 | 0.0879 | No |
129 | NXPH1 | NXPH1 Entrez,  Source | neurexophilin 1 | 9817 | -0.050 | 0.0797 | No |
130 | POU3F4 | POU3F4 Entrez,  Source | POU domain, class 3, transcription factor 4 | 9971 | -0.053 | 0.0725 | No |
131 | POU2F3 | POU2F3 Entrez,  Source | POU domain, class 2, transcription factor 3 | 10351 | -0.059 | 0.0486 | No |
132 | PTEN | PTEN Entrez,  Source | phosphatase and tensin homolog (mutated in multiple advanced cancers 1) | 10692 | -0.066 | 0.0281 | No |
133 | SLC18A3 | SLC18A3 Entrez,  Source | solute carrier family 18 (vesicular acetylcholine), member 3 | 10815 | -0.069 | 0.0245 | No |
134 | PCYT1B | PCYT1B Entrez,  Source | phosphate cytidylyltransferase 1, choline, beta | 10932 | -0.072 | 0.0215 | No |
135 | CRISP1 | CRISP1 Entrez,  Source | cysteine-rich secretory protein 1 | 11196 | -0.078 | 0.0079 | No |
136 | ACBD4 | ACBD4 Entrez,  Source | acyl-Coenzyme A binding domain containing 4 | 11202 | -0.078 | 0.0139 | No |
137 | ADNP | ADNP Entrez,  Source | activity-dependent neuroprotector | 11378 | -0.083 | 0.0074 | No |
138 | SYNPR | SYNPR Entrez,  Source | synaptoporin | 11391 | -0.084 | 0.0133 | No |
139 | ITSN1 | ITSN1 Entrez,  Source | intersectin 1 (SH3 domain protein) | 11645 | -0.090 | 0.0015 | No |
140 | GRID2 | GRID2 Entrez,  Source | glutamate receptor, ionotropic, delta 2 | 11782 | -0.095 | -0.0011 | No |
141 | BZW2 | BZW2 Entrez,  Source | basic leucine zipper and W2 domains 2 | 11874 | -0.098 | -0.0001 | No |
142 | CD79B | CD79B Entrez,  Source | CD79b molecule, immunoglobulin-associated beta | 11950 | -0.101 | 0.0024 | No |
143 | BAT2 | BAT2 Entrez,  Source | HLA-B associated transcript 2 | 12105 | -0.107 | -0.0005 | No |
144 | LYN | LYN Entrez,  Source | v-yes-1 Yamaguchi sarcoma viral related oncogene homolog | 12283 | -0.115 | -0.0045 | No |
145 | AKT2 | AKT2 Entrez,  Source | v-akt murine thymoma viral oncogene homolog 2 | 12338 | -0.118 | 0.0010 | No |
146 | BST2 | BST2 Entrez,  Source | bone marrow stromal cell antigen 2 | 12353 | -0.119 | 0.0095 | No |
147 | ABTB2 | ABTB2 Entrez,  Source | ankyrin repeat and BTB (POZ) domain containing 2 | 12516 | -0.129 | 0.0078 | No |
148 | ARHGEF12 | ARHGEF12 Entrez,  Source | Rho guanine nucleotide exchange factor (GEF) 12 | 12697 | -0.141 | 0.0056 | No |
149 | RARB | RARB Entrez,  Source | retinoic acid receptor, beta | 12717 | -0.143 | 0.0158 | No |
150 | ID2 | ID2 Entrez,  Source | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein | 13029 | -0.193 | 0.0079 | No |
151 | SH3GL3 | SH3GL3 Entrez,  Source | SH3-domain GRB2-like 3 | 13033 | -0.194 | 0.0234 | No |