Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_72h |
| GeneSet | ZHAN_TONSIL_PCBC |
| Enrichment Score (ES) | -0.42327932 |
| Normalized Enrichment Score (NES) | -1.2387452 |
| Nominal p-value | 0.16901408 |
| FDR q-value | 0.61889917 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | ABCD3 | ABCD3 Entrez, Source | ATP-binding cassette, sub-family D (ALD), member 3 | 451 | 0.195 | 0.0743 | No |
| 2 | HADHA | HADHA Entrez, Source | hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit | 1828 | 0.079 | 0.0148 | No |
| 3 | ID3 | ID3 Entrez, Source | inhibitor of DNA binding 3, dominant negative helix-loop-helix protein | 2181 | 0.068 | 0.0259 | No |
| 4 | TNF | TNF Entrez, Source | tumor necrosis factor (TNF superfamily, member 2) | 2770 | 0.053 | 0.0114 | No |
| 5 | MSH2 | MSH2 Entrez, Source | mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) | 3405 | 0.040 | -0.0139 | No |
| 6 | EGR3 | EGR3 Entrez, Source | early growth response 3 | 4101 | 0.029 | -0.0502 | No |
| 7 | CCNF | CCNF Entrez, Source | cyclin F | 4470 | 0.023 | -0.0653 | No |
| 8 | BLR1 | BLR1 Entrez, Source | Burkitt lymphoma receptor 1, GTP binding protein (chemokine (C-X-C motif) receptor 5) | 4764 | 0.019 | -0.0769 | No |
| 9 | RUNX3 | RUNX3 Entrez, Source | runt-related transcription factor 3 | 5356 | 0.010 | -0.1156 | No |
| 10 | FOXM1 | FOXM1 Entrez, Source | forkhead box M1 | 6751 | -0.008 | -0.2160 | No |
| 11 | ITGA6 | ITGA6 Entrez, Source | integrin, alpha 6 | 6967 | -0.010 | -0.2265 | No |
| 12 | OGG1 | OGG1 Entrez, Source | 8-oxoguanine DNA glycosylase | 7030 | -0.011 | -0.2250 | No |
| 13 | LMNB1 | LMNB1 Entrez, Source | lamin B1 | 7411 | -0.015 | -0.2450 | No |
| 14 | HRAS | HRAS Entrez, Source | v-Ha-ras Harvey rat sarcoma viral oncogene homolog | 7568 | -0.018 | -0.2469 | No |
| 15 | MYC | MYC Entrez, Source | v-myc myelocytomatosis viral oncogene homolog (avian) | 7715 | -0.020 | -0.2470 | No |
| 16 | CIITA | CIITA Entrez, Source | class II, major histocompatibility complex, transactivator | 7855 | -0.021 | -0.2456 | No |
| 17 | STCH | STCH Entrez, Source | stress 70 protein chaperone, microsome-associated, 60kDa | 8120 | -0.025 | -0.2514 | No |
| 18 | BLK | BLK Entrez, Source | B lymphoid tyrosine kinase | 8151 | -0.026 | -0.2393 | No |
| 19 | ETS1 | ETS1 Entrez, Source | v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) | 8706 | -0.034 | -0.2623 | No |
| 20 | RAE1 | RAE1 Entrez, Source | RAE1 RNA export 1 homolog (S. pombe) | 9329 | -0.042 | -0.2857 | No |
| 21 | IL4R | IL4R Entrez, Source | interleukin 4 receptor | 9332 | -0.042 | -0.2624 | No |
| 22 | CDC20 | CDC20 Entrez, Source | CDC20 cell division cycle 20 homolog (S. cerevisiae) | 11187 | -0.078 | -0.3585 | Yes |
| 23 | ELF1 | ELF1 Entrez, Source | E74-like factor 1 (ets domain transcription factor) | 11340 | -0.083 | -0.3242 | Yes |
| 24 | XBP1 | XBP1 Entrez, Source | X-box binding protein 1 | 12661 | -0.138 | -0.3467 | Yes |
| 25 | LIG1 | LIG1 Entrez, Source | ligase I, DNA, ATP-dependent | 12780 | -0.150 | -0.2725 | Yes |
| 26 | LTB | LTB Entrez, Source | lymphotoxin beta (TNF superfamily, member 3) | 13327 | -0.568 | 0.0011 | Yes |
