Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | AS3_FIBRO_DN |
| Enrichment Score (ES) | 0.57284325 |
| Normalized Enrichment Score (NES) | 1.6017047 |
| Nominal p-value | 0.023655914 |
| FDR q-value | 0.06780625 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | MAP3K8 | MAP3K8 Entrez, Source | mitogen-activated protein kinase kinase kinase 8 | 34 | 0.817 | 0.1773 | Yes |
| 2 | TNFAIP6 | TNFAIP6 Entrez, Source | tumor necrosis factor, alpha-induced protein 6 | 64 | 0.710 | 0.3314 | Yes |
| 3 | CXCL2 | CXCL2 Entrez, Source | chemokine (C-X-C motif) ligand 2 | 267 | 0.421 | 0.4088 | Yes |
| 4 | CXCL1 | CXCL1 Entrez, Source | chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) | 309 | 0.392 | 0.4919 | Yes |
| 5 | JUNB | JUNB Entrez, Source | jun B proto-oncogene | 470 | 0.312 | 0.5486 | Yes |
| 6 | EGR1 | EGR1 Entrez, Source | early growth response 1 | 795 | 0.221 | 0.5728 | Yes |
| 7 | L1CAM | L1CAM Entrez, Source | L1 cell adhesion molecule | 3249 | 0.077 | 0.4057 | No |
| 8 | NR2F6 | NR2F6 Entrez, Source | nuclear receptor subfamily 2, group F, member 6 | 5110 | 0.036 | 0.2739 | No |
| 9 | EIF4E | EIF4E Entrez, Source | eukaryotic translation initiation factor 4E | 5186 | 0.034 | 0.2758 | No |
| 10 | TAPBP | TAPBP Entrez, Source | TAP binding protein (tapasin) | 7131 | -0.005 | 0.1309 | No |
| 11 | CDC42 | CDC42 Entrez, Source | cell division cycle 42 (GTP binding protein, 25kDa) | 7461 | -0.012 | 0.1088 | No |
| 12 | F11R | F11R Entrez, Source | F11 receptor | 8090 | -0.025 | 0.0672 | No |
| 13 | PGF | PGF Entrez, Source | placental growth factor, vascular endothelial growth factor-related protein | 9515 | -0.060 | -0.0265 | No |
| 14 | ELK1 | ELK1 Entrez, Source | ELK1, member of ETS oncogene family | 9587 | -0.062 | -0.0181 | No |
| 15 | JUN | JUN Entrez, Source | jun oncogene | 9748 | -0.066 | -0.0155 | No |
| 16 | GRB2 | GRB2 Entrez, Source | growth factor receptor-bound protein 2 | 9756 | -0.067 | -0.0014 | No |
| 17 | EGFR | EGFR Entrez, Source | epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) | 10171 | -0.080 | -0.0148 | No |
| 18 | CRABP2 | CRABP2 Entrez, Source | cellular retinoic acid binding protein 2 | 10545 | -0.093 | -0.0223 | No |
| 19 | MAP2K1 | MAP2K1 Entrez, Source | mitogen-activated protein kinase kinase 1 | 11069 | -0.115 | -0.0363 | No |
| 20 | RAB3A | RAB3A Entrez, Source | RAB3A, member RAS oncogene family | 11225 | -0.123 | -0.0209 | No |
| 21 | PLAU | PLAU Entrez, Source | plasminogen activator, urokinase | 12662 | -0.256 | -0.0722 | No |
| 22 | CCL2 | CCL2 Entrez, Source | chemokine (C-C motif) ligand 2 | 13197 | -0.560 | 0.0109 | No |
