Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | single_gel_8d |
| GeneSet | BASSO_HCL_DIFF |
| Enrichment Score (ES) | -0.62980807 |
| Normalized Enrichment Score (NES) | -1.9665364 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.012496608 |
| FWER p-Value | 0.198 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | DPYD | DPYD Entrez, Source | dihydropyrimidine dehydrogenase | 168 | 0.502 | 0.0461 | No |
| 2 | BLR1 | BLR1 Entrez, Source | Burkitt lymphoma receptor 1, GTP binding protein (chemokine (C-X-C motif) receptor 5) | 1703 | 0.137 | -0.0533 | No |
| 3 | TNFRSF1A | TNFRSF1A Entrez, Source | tumor necrosis factor receptor superfamily, member 1A | 1920 | 0.125 | -0.0549 | No |
| 4 | MYF6 | MYF6 Entrez, Source | myogenic factor 6 (herculin) | 2334 | 0.109 | -0.0732 | No |
| 5 | MAPK10 | MAPK10 Entrez, Source | mitogen-activated protein kinase 10 | 2562 | 0.101 | -0.0785 | No |
| 6 | HBB | HBB Entrez, Source | hemoglobin, beta | 2826 | 0.091 | -0.0876 | No |
| 7 | DLC1 | DLC1 Entrez, Source | deleted in liver cancer 1 | 3032 | 0.084 | -0.0932 | No |
| 8 | PTTG1IP | PTTG1IP Entrez, Source | pituitary tumor-transforming 1 interacting protein | 3230 | 0.078 | -0.0990 | No |
| 9 | PTPRM | PTPRM Entrez, Source | protein tyrosine phosphatase, receptor type, M | 3619 | 0.068 | -0.1202 | No |
| 10 | AIF1 | AIF1 Entrez, Source | allograft inflammatory factor 1 | 3839 | 0.063 | -0.1292 | No |
| 11 | RCBTB2 | RCBTB2 Entrez, Source | regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 | 3911 | 0.062 | -0.1274 | No |
| 12 | FGF2 | FGF2 Entrez, Source | fibroblast growth factor 2 (basic) | 4096 | 0.057 | -0.1345 | No |
| 13 | PDE4DIP | PDE4DIP Entrez, Source | phosphodiesterase 4D interacting protein (myomegalin) | 4996 | 0.038 | -0.1977 | No |
| 14 | GAS7 | GAS7 Entrez, Source | growth arrest-specific 7 | 5073 | 0.036 | -0.1991 | No |
| 15 | GABARAPL2 | GABARAPL2 Entrez, Source | GABA(A) receptor-associated protein-like 2 | 5307 | 0.032 | -0.2129 | No |
| 16 | MAF | MAF Entrez, Source | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | 5634 | 0.025 | -0.2345 | No |
| 17 | VAMP3 | VAMP3 Entrez, Source | vesicle-associated membrane protein 3 (cellubrevin) | 6158 | 0.015 | -0.2721 | No |
| 18 | FGFR1 | FGFR1 Entrez, Source | fibroblast growth factor receptor 1 (fms-related tyrosine kinase 2, Pfeiffer syndrome) | 6165 | 0.015 | -0.2708 | No |
| 19 | SIX3 | SIX3 Entrez, Source | sine oculis homeobox homolog 3 (Drosophila) | 6220 | 0.014 | -0.2732 | No |
| 20 | IGFBP3 | IGFBP3 Entrez, Source | insulin-like growth factor binding protein 3 | 6247 | 0.013 | -0.2737 | No |
| 21 | NOVA1 | NOVA1 Entrez, Source | neuro-oncological ventral antigen 1 | 6465 | 0.008 | -0.2890 | No |
| 22 | ENG | ENG Entrez, Source | endoglin (Osler-Rendu-Weber syndrome 1) | 6481 | 0.008 | -0.2892 | No |
| 23 | TRIM2 | TRIM2 Entrez, Source | tripartite motif-containing 2 | 7437 | -0.011 | -0.3597 | No |
| 24 | SDC3 | SDC3 Entrez, Source | syndecan 3 (N-syndecan) | 7495 | -0.012 | -0.3626 | No |
| 25 | RPLP1 | RPLP1 Entrez, Source | ribosomal protein, large, P1 | 8028 | -0.024 | -0.3998 | No |
| 26 | B2M | B2M Entrez, Source | beta-2-microglobulin | 8650 | -0.038 | -0.4420 | No |
| 27 | TCF4 | TCF4 Entrez, Source | transcription factor 4 | 9903 | -0.072 | -0.5278 | No |
| 28 | TBKBP1 | TBKBP1 Entrez, Source | TBK1 binding protein 1 | 9969 | -0.074 | -0.5241 | No |
| 29 | IL3RA | IL3RA Entrez, Source | interleukin 3 receptor, alpha (low affinity) | 10089 | -0.078 | -0.5239 | No |
| 30 | SCN1B | SCN1B Entrez, Source | sodium channel, voltage-gated, type I, beta | 10536 | -0.093 | -0.5466 | No |
| 31 | RTN2 | RTN2 Entrez, Source | reticulon 2 | 11643 | -0.146 | -0.6127 | Yes |
| 32 | CD63 | CD63 Entrez, Source | CD63 molecule | 11668 | -0.148 | -0.5972 | Yes |
| 33 | PAWR | PAWR Entrez, Source | PRKC, apoptosis, WT1, regulator | 11680 | -0.149 | -0.5806 | Yes |
| 34 | RAB13 | RAB13 Entrez, Source | RAB13, member RAS oncogene family | 11994 | -0.172 | -0.5840 | Yes |
| 35 | EMP1 | EMP1 Entrez, Source | epithelial membrane protein 1 | 12100 | -0.181 | -0.5707 | Yes |
| 36 | SMPDL3A | SMPDL3A Entrez, Source | sphingomyelin phosphodiesterase, acid-like 3A | 12339 | -0.209 | -0.5641 | Yes |
| 37 | IL18 | IL18 Entrez, Source | interleukin 18 (interferon-gamma-inducing factor) | 12497 | -0.228 | -0.5492 | Yes |
| 38 | IL1R2 | IL1R2 Entrez, Source | interleukin 1 receptor, type II | 12566 | -0.238 | -0.5265 | Yes |
| 39 | IL1R1 | IL1R1 Entrez, Source | interleukin 1 receptor, type I | 12840 | -0.300 | -0.5120 | Yes |
| 40 | SPRY2 | SPRY2 Entrez, Source | sprouty homolog 2 (Drosophila) | 13095 | -0.423 | -0.4816 | Yes |
| 41 | PRSS23 | PRSS23 Entrez, Source | protease, serine, 23 | 13122 | -0.445 | -0.4316 | Yes |
| 42 | TACC1 | TACC1 Entrez, Source | transforming, acidic coiled-coil containing protein 1 | 13123 | -0.445 | -0.3795 | Yes |
| 43 | CCND1 | CCND1 Entrez, Source | cyclin D1 | 13162 | -0.500 | -0.3239 | Yes |
| 44 | PPIC | PPIC Entrez, Source | peptidylprolyl isomerase C (cyclophilin C) | 13206 | -0.575 | -0.2599 | Yes |
| 45 | CTBP2 | CTBP2 Entrez, Source | C-terminal binding protein 2 | 13212 | -0.580 | -0.1924 | Yes |
| 46 | TIMP1 | TIMP1 Entrez, Source | TIMP metallopeptidase inhibitor 1 | 13213 | -0.582 | -0.1244 | Yes |
| 47 | ANXA1 | ANXA1 Entrez, Source | annexin A1 | 13327 | -1.146 | 0.0011 | Yes |
