Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | single_gel_8d |
| GeneSet | BRG1_ALAB_UP |
| Enrichment Score (ES) | -0.6885999 |
| Normalized Enrichment Score (NES) | -1.9330983 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.018883849 |
| FWER p-Value | 0.32 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | AGT | AGT Entrez, Source | angiotensinogen (serpin peptidase inhibitor, clade A, member 8) | 514 | 0.295 | 0.0086 | No |
| 2 | FADS3 | FADS3 Entrez, Source | fatty acid desaturase 3 | 1104 | 0.181 | -0.0067 | No |
| 3 | TEC | TEC Entrez, Source | tec protein tyrosine kinase | 2729 | 0.095 | -0.1135 | No |
| 4 | FLNB | FLNB Entrez, Source | filamin B, beta (actin binding protein 278) | 3317 | 0.076 | -0.1455 | No |
| 5 | SERPINE2 | SERPINE2 Entrez, Source | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | 4745 | 0.043 | -0.2458 | No |
| 6 | PTPN7 | PTPN7 Entrez, Source | protein tyrosine phosphatase, non-receptor type 7 | 7774 | -0.018 | -0.4703 | No |
| 7 | GADD45A | GADD45A Entrez, Source | growth arrest and DNA-damage-inducible, alpha | 9083 | -0.048 | -0.5608 | No |
| 8 | GPR56 | GPR56 Entrez, Source | G protein-coupled receptor 56 | 9265 | -0.053 | -0.5658 | No |
| 9 | PPM2C | PPM2C Entrez, Source | protein phosphatase 2C, magnesium-dependent, catalytic subunit | 9971 | -0.074 | -0.6070 | No |
| 10 | EMP3 | EMP3 Entrez, Source | epithelial membrane protein 3 | 10906 | -0.107 | -0.6600 | No |
| 11 | DCBLD2 | DCBLD2 Entrez, Source | discoidin, CUB and LCCL domain containing 2 | 11288 | -0.126 | -0.6685 | Yes |
| 12 | PLXNB2 | PLXNB2 Entrez, Source | plexin B2 | 11356 | -0.129 | -0.6529 | Yes |
| 13 | MFGE8 | MFGE8 Entrez, Source | milk fat globule-EGF factor 8 protein | 11372 | -0.130 | -0.6334 | Yes |
| 14 | CTSB | CTSB Entrez, Source | cathepsin B | 11532 | -0.139 | -0.6231 | Yes |
| 15 | SMARCA4 | SMARCA4 Entrez, Source | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | 11592 | -0.143 | -0.6046 | Yes |
| 16 | CTSH | CTSH Entrez, Source | cathepsin H | 11951 | -0.169 | -0.6045 | Yes |
| 17 | CDKN1A | CDKN1A Entrez, Source | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 12163 | -0.188 | -0.5903 | Yes |
| 18 | ACTN4 | ACTN4 Entrez, Source | actinin, alpha 4 | 12269 | -0.201 | -0.5662 | Yes |
| 19 | SMARCA2 | SMARCA2 Entrez, Source | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 | 12295 | -0.204 | -0.5355 | Yes |
| 20 | TPM1 | TPM1 Entrez, Source | tropomyosin 1 (alpha) | 12998 | -0.364 | -0.5300 | Yes |
| 21 | PHLDB1 | PHLDB1 Entrez, Source | pleckstrin homology-like domain, family B, member 1 | 13090 | -0.418 | -0.4701 | Yes |
| 22 | FHL2 | FHL2 Entrez, Source | four and a half LIM domains 2 | 13196 | -0.560 | -0.3885 | Yes |
| 23 | CCL2 | CCL2 Entrez, Source | chemokine (C-C motif) ligand 2 | 13197 | -0.560 | -0.2991 | Yes |
| 24 | AHNAK | AHNAK Entrez, Source | AHNAK nucleoprotein (desmoyokin) | 13291 | -0.852 | -0.1699 | Yes |
| 25 | FBLIM1 | FBLIM1 Entrez, Source | filamin binding LIM protein 1 | 13322 | -1.087 | 0.0015 | Yes |
