Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | single_gel_8d |
| GeneSet | CMV_IE86_UP |
| Enrichment Score (ES) | -0.6279738 |
| Normalized Enrichment Score (NES) | -1.7752653 |
| Nominal p-value | 0.0018975332 |
| FDR q-value | 0.05310068 |
| FWER p-Value | 0.968 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | DHFR | DHFR Entrez, Source | dihydrofolate reductase | 457 | 0.317 | 0.0363 | No |
| 2 | UNG | UNG Entrez, Source | uracil-DNA glycosylase | 3194 | 0.079 | -0.1515 | No |
| 3 | TMEM106C | TMEM106C Entrez, Source | transmembrane protein 106C | 3318 | 0.076 | -0.1439 | No |
| 4 | CCNE1 | CCNE1 Entrez, Source | cyclin E1 | 4056 | 0.058 | -0.1863 | No |
| 5 | POLD3 | POLD3 Entrez, Source | polymerase (DNA-directed), delta 3, accessory subunit | 4626 | 0.046 | -0.2188 | No |
| 6 | CSPG5 | CSPG5 Entrez, Source | chondroitin sulfate proteoglycan 5 (neuroglycan C) | 4877 | 0.040 | -0.2286 | No |
| 7 | BARD1 | BARD1 Entrez, Source | BRCA1 associated RING domain 1 | 5278 | 0.032 | -0.2515 | No |
| 8 | UMPS | UMPS Entrez, Source | uridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5'-decarboxylase) | 7149 | -0.005 | -0.3908 | No |
| 9 | TFAM | TFAM Entrez, Source | transcription factor A, mitochondrial | 7833 | -0.019 | -0.4377 | No |
| 10 | CASP3 | CASP3 Entrez, Source | caspase 3, apoptosis-related cysteine peptidase | 8700 | -0.039 | -0.4941 | No |
| 11 | NASP | NASP Entrez, Source | nuclear autoantigenic sperm protein (histone-binding) | 8949 | -0.045 | -0.5027 | No |
| 12 | SLC29A1 | SLC29A1 Entrez, Source | solute carrier family 29 (nucleoside transporters), member 1 | 9613 | -0.063 | -0.5385 | No |
| 13 | PCNA | PCNA Entrez, Source | proliferating cell nuclear antigen | 10651 | -0.097 | -0.5948 | No |
| 14 | FOXM1 | FOXM1 Entrez, Source | forkhead box M1 | 10847 | -0.105 | -0.5861 | No |
| 15 | DCK | DCK Entrez, Source | deoxycytidine kinase | 11406 | -0.131 | -0.5988 | Yes |
| 16 | PTTG1 | PTTG1 Entrez, Source | pituitary tumor-transforming 1 | 11624 | -0.145 | -0.5828 | Yes |
| 17 | BTG3 | BTG3 Entrez, Source | BTG family, member 3 | 11661 | -0.148 | -0.5526 | Yes |
| 18 | RFC2 | RFC2 Entrez, Source | replication factor C (activator 1) 2, 40kDa | 11987 | -0.172 | -0.5387 | Yes |
| 19 | TYMS | TYMS Entrez, Source | thymidylate synthetase | 12013 | -0.174 | -0.5019 | Yes |
| 20 | MSH2 | MSH2 Entrez, Source | mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) | 12401 | -0.215 | -0.4831 | Yes |
| 21 | H2AFX | H2AFX Entrez, Source | H2A histone family, member X | 12504 | -0.229 | -0.4397 | Yes |
| 22 | RFC3 | RFC3 Entrez, Source | replication factor C (activator 1) 3, 38kDa | 12611 | -0.247 | -0.3927 | Yes |
| 23 | RAB27A | RAB27A Entrez, Source | RAB27A, member RAS oncogene family | 12981 | -0.351 | -0.3421 | Yes |
| 24 | MCM7 | MCM7 Entrez, Source | MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) | 13028 | -0.381 | -0.2608 | Yes |
| 25 | KIAA0101 | KIAA0101 Entrez, Source | KIAA0101 | 13128 | -0.448 | -0.1685 | Yes |
| 26 | MCM6 | MCM6 Entrez, Source | MCM6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) | 13289 | -0.828 | 0.0040 | Yes |
