Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | single_gel_8d |
| GeneSet | DFOSB_BRAIN_2WKS_UP |
| Enrichment Score (ES) | -0.602803 |
| Normalized Enrichment Score (NES) | -1.661447 |
| Nominal p-value | 0.009451796 |
| FDR q-value | 0.0917993 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | HMGCS1 | HMGCS1 Entrez, Source | 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) | 199 | 0.477 | 0.0861 | No |
| 2 | SCN1A | SCN1A Entrez, Source | sodium channel, voltage-gated, type I, alpha | 1591 | 0.143 | 0.0121 | No |
| 3 | VSNL1 | VSNL1 Entrez, Source | visinin-like 1 | 4526 | 0.048 | -0.1981 | No |
| 4 | SERPINI1 | SERPINI1 Entrez, Source | serpin peptidase inhibitor, clade I (neuroserpin), member 1 | 4533 | 0.048 | -0.1884 | No |
| 5 | OLFM1 | OLFM1 Entrez, Source | olfactomedin 1 | 4950 | 0.039 | -0.2114 | No |
| 6 | GARS | GARS Entrez, Source | glycyl-tRNA synthetase | 5484 | 0.028 | -0.2455 | No |
| 7 | SYT2 | SYT2 Entrez, Source | synaptotagmin II | 5846 | 0.021 | -0.2681 | No |
| 8 | ACCN1 | ACCN1 Entrez, Source | amiloride-sensitive cation channel 1, neuronal (degenerin) | 6344 | 0.011 | -0.3032 | No |
| 9 | PIB5PA | PIB5PA Entrez, Source | phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A | 7047 | -0.003 | -0.3552 | No |
| 10 | STMN2 | STMN2 Entrez, Source | stathmin-like 2 | 7274 | -0.008 | -0.3705 | No |
| 11 | APBA2 | APBA2 Entrez, Source | amyloid beta (A4) precursor protein-binding, family A, member 2 (X11-like) | 8047 | -0.024 | -0.4233 | No |
| 12 | MOBP | MOBP Entrez, Source | myelin-associated oligodendrocyte basic protein | 9647 | -0.064 | -0.5298 | No |
| 13 | GSTO1 | GSTO1 Entrez, Source | glutathione S-transferase omega 1 | 10091 | -0.078 | -0.5466 | No |
| 14 | CADPS | CADPS Entrez, Source | Ca2+-dependent secretion activator | 10841 | -0.105 | -0.5806 | Yes |
| 15 | SMAD1 | SMAD1 Entrez, Source | SMAD, mothers against DPP homolog 1 (Drosophila) | 10869 | -0.105 | -0.5603 | Yes |
| 16 | GEFT | GEFT Entrez, Source | - | 10934 | -0.108 | -0.5421 | Yes |
| 17 | ADARB1 | ADARB1 Entrez, Source | adenosine deaminase, RNA-specific, B1 (RED1 homolog rat) | 11216 | -0.122 | -0.5373 | Yes |
| 18 | CTGF | CTGF Entrez, Source | connective tissue growth factor | 11278 | -0.125 | -0.5152 | Yes |
| 19 | NEFH | NEFH Entrez, Source | neurofilament, heavy polypeptide 200kDa | 11557 | -0.141 | -0.5063 | Yes |
| 20 | SEPT9 | SEPT9 Entrez, Source | septin 9 | 11618 | -0.145 | -0.4801 | Yes |
| 21 | IMPACT | IMPACT Entrez, Source | Impact homolog (mouse) | 11924 | -0.167 | -0.4675 | Yes |
| 22 | PTPRK | PTPRK Entrez, Source | protein tyrosine phosphatase, receptor type, K | 12652 | -0.254 | -0.4684 | Yes |
| 23 | NOV | NOV Entrez, Source | nephroblastoma overexpressed gene | 12678 | -0.260 | -0.4150 | Yes |
| 24 | COL5A2 | COL5A2 Entrez, Source | collagen, type V, alpha 2 | 12760 | -0.277 | -0.3624 | Yes |
| 25 | BDNF | BDNF Entrez, Source | brain-derived neurotrophic factor | 13183 | -0.530 | -0.2816 | Yes |
| 26 | FHL2 | FHL2 Entrez, Source | four and a half LIM domains 2 | 13196 | -0.560 | -0.1637 | Yes |
| 27 | STMN1 | STMN1 Entrez, Source | stathmin 1/oncoprotein 18 | 13288 | -0.823 | 0.0041 | Yes |
