Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | single_gel_8d |
| GeneSet | G1_S_TRANSITION_OF_MITOTIC_CELL_CYCLE |
| Enrichment Score (ES) | -0.691945 |
| Normalized Enrichment Score (NES) | -1.6906476 |
| Nominal p-value | 0.015779093 |
| FDR q-value | 0.07778638 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | SPDYA | SPDYA Entrez, Source | speedy homolog A (Drosophila) | 1994 | 0.122 | -0.0951 | No |
| 2 | GFI1 | GFI1 Entrez, Source | growth factor independent 1 | 5640 | 0.025 | -0.3575 | No |
| 3 | INHBA | INHBA Entrez, Source | inhibin, beta A (activin A, activin AB alpha polypeptide) | 7375 | -0.010 | -0.4832 | No |
| 4 | CDKN2C | CDKN2C Entrez, Source | cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) | 8322 | -0.030 | -0.5406 | No |
| 5 | PPP6C | PPP6C Entrez, Source | protein phosphatase 6, catalytic subunit | 8915 | -0.044 | -0.5654 | No |
| 6 | CUL5 | CUL5 Entrez, Source | cullin 5 | 9220 | -0.052 | -0.5651 | No |
| 7 | CDKN3 | CDKN3 Entrez, Source | cyclin-dependent kinase inhibitor 3 (CDK2-associated dual specificity phosphatase) | 9252 | -0.053 | -0.5437 | No |
| 8 | GSPT1 | GSPT1 Entrez, Source | G1 to S phase transition 1 | 9560 | -0.061 | -0.5394 | No |
| 9 | CDKN2D | CDKN2D Entrez, Source | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) | 9788 | -0.068 | -0.5262 | No |
| 10 | ACVR1 | ACVR1 Entrez, Source | activin A receptor, type I | 11998 | -0.173 | -0.6147 | Yes |
| 11 | CDKN1A | CDKN1A Entrez, Source | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 12163 | -0.188 | -0.5431 | Yes |
| 12 | CDKN1B | CDKN1B Entrez, Source | cyclin-dependent kinase inhibitor 1B (p27, Kip1) | 12251 | -0.199 | -0.4608 | Yes |
| 13 | CDK4 | CDK4 Entrez, Source | cyclin-dependent kinase 4 | 12794 | -0.284 | -0.3744 | Yes |
| 14 | CDKN2A | CDKN2A Entrez, Source | cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) | 13099 | -0.425 | -0.2074 | Yes |
| 15 | BCAT1 | BCAT1 Entrez, Source | branched chain aminotransferase 1, cytosolic | 13167 | -0.505 | 0.0131 | Yes |
