Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_single_gel_8d.class.cls
#double_gel_8d_versus_single_gel_8d_repos
Phenotypeclass.cls#double_gel_8d_versus_single_gel_8d_repos
Upregulated in classdouble_gel_8d
GeneSetHOHENKIRK_MONOCYTE_DEND_UP
Enrichment Score (ES)0.5084545
Normalized Enrichment Score (NES)1.8110006
Nominal p-value0.0
FDR q-value0.012302518
FWER p-Value0.858
Table: GSEA Results Summary



Fig 1: Enrichment plot: HOHENKIRK_MONOCYTE_DEND_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FCGR2BFCGR2B
Entrez,  Source
Fc fragment of IgG, low affinity IIb, receptor (CD32)121.0560.0710Yes
2APOC1APOC1
Entrez,  Source
apolipoprotein C-I360.8090.1244Yes
3TNFAIP6TNFAIP6
Entrez,  Source
tumor necrosis factor, alpha-induced protein 6640.7100.1707Yes
4CBSCBS
Entrez,  Source
cystathionine-beta-synthase1580.5230.1993Yes
5LPLLPL
Entrez,  Source
lipoprotein lipase2300.4510.2246Yes
6ACOT2ACOT2
Entrez,  Source
acyl-CoA thioesterase 22310.4500.2553Yes
7GDF15GDF15
Entrez,  Source
growth differentiation factor 152370.4450.2852Yes
8MGLLMGLL
Entrez,  Source
monoglyceride lipase2410.4430.3152Yes
9TFRCTFRC
Entrez,  Source
transferrin receptor (p90, CD71)3110.3900.3365Yes
10RARRES1RARRES1
Entrez,  Source
retinoic acid receptor responder (tazarotene induced) 13250.3810.3615Yes
11ACAA2ACAA2
Entrez,  Source
acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)3740.3530.3819Yes
12DUSP5DUSP5
Entrez,  Source
dual specificity phosphatase 53830.3460.4049Yes
13HSD11B1HSD11B1
Entrez,  Source
hydroxysteroid (11-beta) dehydrogenase 14870.3060.4179Yes
14SLC11A2SLC11A2
Entrez,  Source
solute carrier family 11 (proton-coupled divalent metal ion transporters), member 25380.2870.4337Yes
15NR1H3NR1H3
Entrez,  Source
nuclear receptor subfamily 1, group H, member 35400.2870.4531Yes
16TGFATGFA
Entrez,  Source
transforming growth factor, alpha7400.2300.4538Yes
17CATCAT
Entrez,  Source
catalase8840.2090.4573Yes
18PCBD1PCBD1
Entrez,  Source
pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1)9360.2020.4671Yes
19FABP4FABP4
Entrez,  Source
fatty acid binding protein 4, adipocyte9470.2000.4800Yes
20SULT1C1SULT1C1
Entrez,  Source
sulfotransferase family, cytosolic, 1C, member 19640.1990.4923Yes
21FABP5FABP5
Entrez,  Source
fatty acid binding protein 5 (psoriasis-associated)13630.1600.4732Yes
22CEBPACEBPA
Entrez,  Source
CCAAT/enhancer binding protein (C/EBP), alpha13860.1580.4823Yes
23ENPP2ENPP2
Entrez,  Source
ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin)14160.1560.4907Yes
24A2MA2M
Entrez,  Source
alpha-2-macroglobulin14330.1550.5000Yes
25OATOAT
Entrez,  Source
ornithine aminotransferase (gyrate atrophy)14600.1520.5085Yes
26DPP4DPP4
Entrez,  Source
dipeptidyl-peptidase 4 (CD26, adenosine deaminase complexing protein 2)19190.1250.4825No
27CD86CD86
Entrez,  Source
CD86 molecule20050.1210.4843No
28SCARB1SCARB1
Entrez,  Source
scavenger receptor class B, member 122520.1120.4734No
29C1QBC1QB
Entrez,  Source
complement component 1, q subcomponent, B chain25880.1000.4549No
30CYB5ACYB5A
Entrez,  Source
cytochrome b5 type A (microsomal)26080.0990.4602No
31MAOAMAOA
Entrez,  Source
monoamine oxidase A28020.0910.4519No
32DUSP1DUSP1
Entrez,  Source
dual specificity phosphatase 132750.0770.4215No
33ST6GAL1ST6GAL1
Entrez,  Source
ST6 beta-galactosamide alpha-2,6-sialyltranferase 133000.0760.4249No
34F13A1F13A1
Entrez,  Source
coagulation factor XIII, A1 polypeptide33040.0760.4298No
35CCL22CCL22
Entrez,  Source
chemokine (C-C motif) ligand 2233770.0740.4294No
36PTPROPTPRO
Entrez,  Source
protein tyrosine phosphatase, receptor type, O34570.0720.4284No
37GATMGATM
Entrez,  Source
glycine amidinotransferase (L-arginine:glycine amidinotransferase)36910.0670.4154No
38CSF1CSF1
Entrez,  Source
colony stimulating factor 1 (macrophage)37160.0660.4180No
39SPP1SPP1
Entrez,  Source
secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)38060.0640.4157No
40ITGB5ITGB5
Entrez,  Source
integrin, beta 539980.0590.4053No
41PFKPPFKP
Entrez,  Source
phosphofructokinase, platelet40540.0580.4051No
42DNASE1L3DNASE1L3
Entrez,  Source
deoxyribonuclease I-like 342300.0540.3956No
43MMP12MMP12
Entrez,  Source
matrix metallopeptidase 12 (macrophage elastase)47030.0440.3630No
44ALOX15ALOX15
Entrez,  Source
arachidonate 15-lipoxygenase47280.0430.3642No
45RNASE6RNASE6
Entrez,  Source
ribonuclease, RNase A family, k648480.0410.3580No
46CCNA1CCNA1
Entrez,  Source
cyclin A153450.0310.3227No
47CDH1CDH1
Entrez,  Source
cadherin 1, type 1, E-cadherin (epithelial)55580.0260.3085No
48BIRC3BIRC3
Entrez,  Source
baculoviral IAP repeat-containing 355600.0260.3102No
49CCL17CCL17
Entrez,  Source
chemokine (C-C motif) ligand 1757650.0230.2964No
50SLASLA
Entrez,  Source
Src-like-adaptor58350.0210.2927No
51NR4A3NR4A3
Entrez,  Source
nuclear receptor subfamily 4, group A, member 358910.0200.2899No
52CTSCCTSC
Entrez,  Source
cathepsin C60080.0180.2824No
53HMGN3HMGN3
Entrez,  Source
high mobility group nucleosomal binding domain 362940.0120.2617No
54TOMM40TOMM40
Entrez,  Source
translocase of outer mitochondrial membrane 40 homolog (yeast)65980.0060.2393No
55CCNHCCNH
Entrez,  Source
cyclin H7280-0.0080.1885No
56INHBAINHBA
Entrez,  Source
inhibin, beta A (activin A, activin AB alpha polypeptide)7375-0.0100.1820No
57ECM1ECM1
Entrez,  Source
extracellular matrix protein 17713-0.0170.1578No
58RAP1GAPRAP1GAP
Entrez,  Source
RAP1 GTPase activating protein7792-0.0180.1532No
59TGM2TGM2
Entrez,  Source
transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)7842-0.0200.1508No
60ARF4ARF4
Entrez,  Source
ADP-ribosylation factor 47998-0.0230.1407No
61INDOINDO
Entrez,  Source
indoleamine-pyrrole 2,3 dioxygenase8124-0.0260.1330No
62GAS6GAS6
Entrez,  Source
growth arrest-specific 68485-0.0340.1082No
63PEBP1PEBP1
Entrez,  Source
phosphatidylethanolamine binding protein 19172-0.0510.0599No
64AESAES
Entrez,  Source
amino-terminal enhancer of split9813-0.0690.0163No
65KCNAB2KCNAB2
Entrez,  Source
potassium voltage-gated channel, shaker-related subfamily, beta member 29914-0.0720.0137No
66SPINT2SPINT2
Entrez,  Source
serine peptidase inhibitor, Kunitz type, 29927-0.0730.0177No
67ACOT7ACOT7
Entrez,  Source
acyl-CoA thioesterase 79973-0.0740.0194No
68CRABP2CRABP2
Entrez,  Source
cellular retinoic acid binding protein 210545-0.093-0.0174No
69QSCN6QSCN6
Entrez,  Source
quiescin Q610576-0.094-0.0132No
70ITPKBITPKB
Entrez,  Source
inositol 1,4,5-trisphosphate 3-kinase B10615-0.096-0.0096No
71SNRPNSNRPN
Entrez,  Source
small nuclear ribonucleoprotein polypeptide N10931-0.108-0.0260No
72CD74CD74
Entrez,  Source
CD74 molecule, major histocompatibility complex, class II invariant chain10944-0.109-0.0194No
73CITED2CITED2
Entrez,  Source
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 211087-0.116-0.0223No
74PDLIM4PDLIM4
Entrez,  Source
PDZ and LIM domain 411133-0.119-0.0176No
75ATP1B1ATP1B1
Entrez,  Source
ATPase, Na+/K+ transporting, beta 1 polypeptide11599-0.144-0.0429No
76CD59CD59
Entrez,  Source
CD59 molecule, complement regulatory protein11683-0.149-0.0390No
77FABP3FABP3
Entrez,  Source
fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)12473-0.224-0.0833No
78PFKMPFKM
Entrez,  Source
phosphofructokinase, muscle13007-0.369-0.0983No
79CCND2CCND2
Entrez,  Source
cyclin D213016-0.374-0.0735No
80ABCG1ABCG1
Entrez,  Source
ATP-binding cassette, sub-family G (WHITE), member 113094-0.421-0.0506No
81LGALS3BPLGALS3BP
Entrez,  Source
lectin, galactoside-binding, soluble, 3 binding protein13114-0.440-0.0220No
82PPICPPIC
Entrez,  Source
peptidylprolyl isomerase C (cyclophilin C)13206-0.5750.0103No
Table: GSEA details [plain text format]



Fig 2: HOHENKIRK_MONOCYTE_DEND_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HOHENKIRK_MONOCYTE_DEND_UP: Random ES distribution   
Gene set null distribution of ES for HOHENKIRK_MONOCYTE_DEND_UP