Details for gene set HSA00260_GLYCINE_SERINE_AND_THREONINE

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos
Phenotype	class.cls#double_gel_8d_versus_single_gel_8d_repos
Upregulated in class	double_gel_8d
GeneSet	HSA00260_GLYCINE_SERINE_AND_THREONINE_METABOLISM
Enrichment Score (ES)	0.7862822
Normalized Enrichment Score (NES)	2.3916922
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PEMT	PEMT Entrez, Source	phosphatidylethanolamine N-methyltransferase	26	0.861	0.0894	Yes
2	GNMT	GNMT Entrez, Source	glycine N-methyltransferase	28	0.847	0.1794	Yes
3	CHDH	CHDH Entrez, Source	choline dehydrogenase	78	0.664	0.2462	Yes
4	AGXT	AGXT Entrez, Source	alanine-glyoxylate aminotransferase (oxalosis I; hyperoxaluria I; glycolicaciduria; serine-pyruvate aminotransferase)	108	0.606	0.3084	Yes
5	ABP1	ABP1 Entrez, Source	amiloride binding protein 1 (amine oxidase (copper-containing))	109	0.606	0.3727	Yes
6	DMGDH	DMGDH Entrez, Source	dimethylglycine dehydrogenase	128	0.569	0.4318	Yes
7	BHMT	BHMT Entrez, Source	betaine-homocysteine methyltransferase	140	0.550	0.4894	Yes
8	CTH	CTH Entrez, Source	cystathionase (cystathionine gamma-lyase)	148	0.535	0.5457	Yes
9	CBS	CBS Entrez, Source	cystathionine-beta-synthase	158	0.523	0.6006	Yes
10	AGXT2	AGXT2 Entrez, Source	alanine-glyoxylate aminotransferase 2	233	0.448	0.6427	Yes
11	SARDH	SARDH Entrez, Source	sarcosine dehydrogenase	245	0.438	0.6883	Yes
12	GAMT	GAMT Entrez, Source	guanidinoacetate N-methyltransferase	753	0.227	0.6744	Yes
13	GCAT	GCAT Entrez, Source	glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase)	767	0.225	0.6973	Yes
14	ALAS1	ALAS1 Entrez, Source	aminolevulinate, delta-, synthase 1	839	0.215	0.7148	Yes
15	CHKA	CHKA Entrez, Source	choline kinase alpha	984	0.196	0.7248	Yes
16	SHMT2	SHMT2 Entrez, Source	serine hydroxymethyltransferase 2 (mitochondrial)	1105	0.181	0.7350	Yes
17	SDS	SDS Entrez, Source	serine dehydratase	1222	0.169	0.7442	Yes
18	PSAT1	PSAT1 Entrez, Source	phosphoserine aminotransferase 1	1473	0.151	0.7415	Yes
19	PHGDH	PHGDH Entrez, Source	phosphoglycerate dehydrogenase	1496	0.150	0.7557	Yes
20	DLD	DLD Entrez, Source	dihydrolipoamide dehydrogenase	1628	0.141	0.7609	Yes
21	MAOB	MAOB Entrez, Source	monoamine oxidase B	1712	0.137	0.7692	Yes
22	PSPH	PSPH Entrez, Source	phosphoserine phosphatase	1863	0.128	0.7715	Yes
23	SHMT1	SHMT1 Entrez, Source	serine hydroxymethyltransferase 1 (soluble)	1892	0.127	0.7828	Yes
24	RDH11	RDH11 Entrez, Source	retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	2018	0.121	0.7863	Yes
25	ALAS2	ALAS2 Entrez, Source	aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia)	2203	0.114	0.7846	No
26	TARS	TARS Entrez, Source	threonyl-tRNA synthetase	2704	0.095	0.7571	No
27	MAOA	MAOA Entrez, Source	monoamine oxidase A	2802	0.091	0.7596	No
28	GATM	GATM Entrez, Source	glycine amidinotransferase (L-arginine:glycine amidinotransferase)	3691	0.067	0.6999	No
29	AMT	AMT Entrez, Source	aminomethyltransferase	3875	0.063	0.6928	No
30	AKR1B10	AKR1B10 Entrez, Source	aldo-keto reductase family 1, member B10 (aldose reductase)	4097	0.057	0.6823	No
31	AOC3	AOC3 Entrez, Source	amine oxidase, copper containing 3 (vascular adhesion protein 1)	4870	0.040	0.6286	No
32	GARS	GARS Entrez, Source	glycyl-tRNA synthetase	5484	0.028	0.5855	No
33	CHKB	CHKB Entrez, Source	choline kinase beta	6203	0.014	0.5331	No
34	HSD3B7	HSD3B7 Entrez, Source	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7	8334	-0.031	0.3763	No