Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | single_gel_8d |
| GeneSet | IDX_TSA_DN_CLUSTER2 |
| Enrichment Score (ES) | -0.71458256 |
| Normalized Enrichment Score (NES) | -2.254463 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0 |
| FWER p-Value | 0.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | PTGIS | PTGIS Entrez, Source | prostaglandin I2 (prostacyclin) synthase | 894 | 0.208 | -0.0485 | No |
| 2 | VCAM1 | VCAM1 Entrez, Source | vascular cell adhesion molecule 1 | 1016 | 0.190 | -0.0405 | No |
| 3 | SLC38A4 | SLC38A4 Entrez, Source | solute carrier family 38, member 4 | 1084 | 0.184 | -0.0290 | No |
| 4 | PDPN | PDPN Entrez, Source | podoplanin | 1169 | 0.174 | -0.0196 | No |
| 5 | NQO2 | NQO2 Entrez, Source | NAD(P)H dehydrogenase, quinone 2 | 1174 | 0.173 | -0.0043 | No |
| 6 | SERPINF1 | SERPINF1 Entrez, Source | serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 | 1787 | 0.132 | -0.0385 | No |
| 7 | MAP1LC3B | MAP1LC3B Entrez, Source | microtubule-associated protein 1 light chain 3 beta | 3380 | 0.074 | -0.1515 | No |
| 8 | TWIST2 | TWIST2 Entrez, Source | twist homolog 2 (Drosophila) | 5544 | 0.027 | -0.3118 | No |
| 9 | FGF7 | FGF7 Entrez, Source | fibroblast growth factor 7 (keratinocyte growth factor) | 5913 | 0.020 | -0.3377 | No |
| 10 | SLC1A4 | SLC1A4 Entrez, Source | solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 | 6704 | 0.004 | -0.3968 | No |
| 11 | PGCP | PGCP Entrez, Source | - | 7097 | -0.004 | -0.4259 | No |
| 12 | SERTAD1 | SERTAD1 Entrez, Source | SERTA domain containing 1 | 7125 | -0.005 | -0.4275 | No |
| 13 | SCPEP1 | SCPEP1 Entrez, Source | serine carboxypeptidase 1 | 7325 | -0.009 | -0.4417 | No |
| 14 | LAMP2 | LAMP2 Entrez, Source | lysosomal-associated membrane protein 2 | 7865 | -0.020 | -0.4805 | No |
| 15 | TES | TES Entrez, Source | testis derived transcript (3 LIM domains) | 7914 | -0.021 | -0.4821 | No |
| 16 | SLC7A5 | SLC7A5 Entrez, Source | solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 | 8548 | -0.036 | -0.5265 | No |
| 17 | NCAM1 | NCAM1 Entrez, Source | neural cell adhesion molecule 1 | 8637 | -0.038 | -0.5298 | No |
| 18 | ZFP36L2 | ZFP36L2 Entrez, Source | zinc finger protein 36, C3H type-like 2 | 8772 | -0.040 | -0.5362 | No |
| 19 | TMSB10 | TMSB10 Entrez, Source | thymosin, beta 10 | 9124 | -0.049 | -0.5582 | No |
| 20 | TINP1 | TINP1 Entrez, Source | - | 9981 | -0.074 | -0.6159 | No |
| 21 | BAX | BAX Entrez, Source | BCL2-associated X protein | 10699 | -0.098 | -0.6610 | No |
| 22 | EMP3 | EMP3 Entrez, Source | epithelial membrane protein 3 | 10906 | -0.107 | -0.6668 | No |
| 23 | PLXNB2 | PLXNB2 Entrez, Source | plexin B2 | 11356 | -0.129 | -0.6890 | No |
| 24 | GNB1 | GNB1 Entrez, Source | guanine nucleotide binding protein (G protein), beta polypeptide 1 | 11595 | -0.143 | -0.6940 | No |
| 25 | PRDX4 | PRDX4 Entrez, Source | peroxiredoxin 4 | 11707 | -0.150 | -0.6889 | No |
| 26 | SMAD6 | SMAD6 Entrez, Source | SMAD, mothers against DPP homolog 6 (Drosophila) | 12050 | -0.177 | -0.6986 | Yes |
| 27 | ACTA2 | ACTA2 Entrez, Source | actin, alpha 2, smooth muscle, aorta | 12216 | -0.193 | -0.6936 | Yes |
| 28 | DSTN | DSTN Entrez, Source | destrin (actin depolymerizing factor) | 12275 | -0.202 | -0.6798 | Yes |
| 29 | PLD3 | PLD3 Entrez, Source | phospholipase D family, member 3 | 12403 | -0.215 | -0.6700 | Yes |
| 30 | ASAH1 | ASAH1 Entrez, Source | N-acylsphingosine amidohydrolase (acid ceramidase) 1 | 12503 | -0.229 | -0.6569 | Yes |
| 31 | CAP1 | CAP1 Entrez, Source | CAP, adenylate cyclase-associated protein 1 (yeast) | 12522 | -0.231 | -0.6374 | Yes |
| 32 | CD99 | CD99 Entrez, Source | CD99 molecule | 12537 | -0.234 | -0.6174 | Yes |
| 33 | PPGB | PPGB Entrez, Source | protective protein for beta-galactosidase (galactosialidosis) | 12547 | -0.235 | -0.5969 | Yes |
| 34 | MYH9 | MYH9 Entrez, Source | myosin, heavy chain 9, non-muscle | 12585 | -0.241 | -0.5780 | Yes |
| 35 | ANXA5 | ANXA5 Entrez, Source | annexin A5 | 12668 | -0.258 | -0.5609 | Yes |
| 36 | ANXA3 | ANXA3 Entrez, Source | annexin A3 | 12750 | -0.275 | -0.5423 | Yes |
| 37 | LEPROT | LEPROT Entrez, Source | leptin receptor overlapping transcript | 12812 | -0.289 | -0.5208 | Yes |
| 38 | CD276 | CD276 Entrez, Source | CD276 molecule | 12865 | -0.308 | -0.4970 | Yes |
| 39 | CAPG | CAPG Entrez, Source | capping protein (actin filament), gelsolin-like | 13018 | -0.375 | -0.4746 | Yes |
| 40 | TSPAN6 | TSPAN6 Entrez, Source | tetraspanin 6 | 13052 | -0.400 | -0.4412 | Yes |
| 41 | PRSS23 | PRSS23 Entrez, Source | protease, serine, 23 | 13122 | -0.445 | -0.4063 | Yes |
| 42 | FXYD5 | FXYD5 Entrez, Source | FXYD domain containing ion transport regulator 5 | 13147 | -0.472 | -0.3656 | Yes |
| 43 | RAB31 | RAB31 Entrez, Source | RAB31, member RAS oncogene family | 13154 | -0.487 | -0.3223 | Yes |
| 44 | PDLIM7 | PDLIM7 Entrez, Source | PDZ and LIM domain 7 (enigma) | 13170 | -0.508 | -0.2777 | Yes |
| 45 | BDNF | BDNF Entrez, Source | brain-derived neurotrophic factor | 13183 | -0.530 | -0.2308 | Yes |
| 46 | F2R | F2R Entrez, Source | coagulation factor II (thrombin) receptor | 13270 | -0.762 | -0.1687 | Yes |
| 47 | MSN | MSN Entrez, Source | moesin | 13302 | -0.941 | -0.0863 | Yes |
| 48 | LOX | LOX Entrez, Source | lysyl oxidase | 13308 | -0.991 | 0.0026 | Yes |
