Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | IMMUNE_EFFECTOR_PROCESS |
| Enrichment Score (ES) | 0.61589396 |
| Normalized Enrichment Score (NES) | 1.6303642 |
| Nominal p-value | 0.016771488 |
| FDR q-value | 0.05634592 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | APOA2 | APOA2 Entrez, Source | apolipoprotein A-II | 7 | 1.206 | 0.3031 | Yes |
| 2 | MBL2 | MBL2 Entrez, Source | mannose-binding lectin (protein C) 2, soluble (opsonic defect) | 263 | 0.424 | 0.3908 | Yes |
| 3 | CFHR1 | CFHR1 Entrez, Source | complement factor H-related 1 | 350 | 0.362 | 0.4755 | Yes |
| 4 | BNIP3 | BNIP3 Entrez, Source | BCL2/adenovirus E1B 19kDa interacting protein 3 | 356 | 0.360 | 0.5656 | Yes |
| 5 | APOA1 | APOA1 Entrez, Source | apolipoprotein A-I | 1052 | 0.187 | 0.5605 | Yes |
| 6 | PTPRC | PTPRC Entrez, Source | protein tyrosine phosphatase, receptor type, C | 1238 | 0.168 | 0.5889 | Yes |
| 7 | CD40LG | CD40LG Entrez, Source | CD40 ligand (TNF superfamily, member 5, hyper-IgM syndrome) | 1443 | 0.154 | 0.6122 | Yes |
| 8 | DEFB103A | DEFB103A Entrez, Source | defensin, beta 103A | 1830 | 0.130 | 0.6159 | Yes |
| 9 | BCL2 | BCL2 Entrez, Source | B-cell CLL/lymphoma 2 | 2467 | 0.104 | 0.5944 | No |
| 10 | BNIP3L | BNIP3L Entrez, Source | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 4011 | 0.059 | 0.4935 | No |
| 11 | IL4 | IL4 Entrez, Source | interleukin 4 | 4550 | 0.047 | 0.4650 | No |
| 12 | IL12A | IL12A Entrez, Source | interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35) | 4872 | 0.040 | 0.4511 | No |
| 13 | IL12B | IL12B Entrez, Source | interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) | 5931 | 0.020 | 0.3766 | No |
| 14 | NCR1 | NCR1 Entrez, Source | natural cytotoxicity triggering receptor 1 | 6132 | 0.016 | 0.3656 | No |
| 15 | TNFSF13 | TNFSF13 Entrez, Source | tumor necrosis factor (ligand) superfamily, member 13 | 7907 | -0.021 | 0.2378 | No |
| 16 | TARBP2 | TARBP2 Entrez, Source | Tar (HIV-1) RNA binding protein 2 | 9013 | -0.046 | 0.1665 | No |
| 17 | CD74 | CD74 Entrez, Source | CD74 molecule, major histocompatibility complex, class II invariant chain | 10944 | -0.109 | 0.0490 | No |
| 18 | C2 | C2 Entrez, Source | complement component 2 | 11264 | -0.125 | 0.0565 | No |
| 19 | TGFB1 | TGFB1 Entrez, Source | transforming growth factor, beta 1 (Camurati-Engelmann disease) | 13047 | -0.395 | 0.0221 | No |
