Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_single_gel_8d.class.cls
#double_gel_8d_versus_single_gel_8d_repos
Phenotypeclass.cls#double_gel_8d_versus_single_gel_8d_repos
Upregulated in classsingle_gel_8d
GeneSetINTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE
Enrichment Score (ES)-0.48957884
Normalized Enrichment Score (NES)-2.0130339
Nominal p-value0.0
FDR q-value0.007353516
FWER p-Value0.095
Table: GSEA Results Summary



Fig 1: Enrichment plot: INTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GYS2GYS2
Entrez,  Source
glycogen synthase 2 (liver)520.7480.0166No
2CORO1ACORO1A
Entrez,  Source
coronin, actin binding protein, 1A1360.5560.0256No
3JUNBJUNB
Entrez,  Source
jun B proto-oncogene4700.3120.0087No
4MRPL40MRPL40
Entrez,  Source
mitochondrial ribosomal protein L409810.197-0.0250No
5DNAJB9DNAJB9
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily B, member 911330.178-0.0316No
6ABRAABRA
Entrez,  Source
actin-binding Rho activating protein11900.172-0.0312No
7UXTUXT
Entrez,  Source
ubiquitously-expressed transcript12250.169-0.0291No
8FGF18FGF18
Entrez,  Source
fibroblast growth factor 1813010.164-0.0303No
9GRM7GRM7
Entrez,  Source
glutamate receptor, metabotropic 715470.146-0.0451No
10TGM1TGM1
Entrez,  Source
transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)15890.144-0.0443No
11NARFNARF
Entrez,  Source
nuclear prelamin A recognition factor16050.143-0.0415No
12SPTBN4SPTBN4
Entrez,  Source
spectrin, beta, non-erythrocytic 416510.140-0.0411No
13STOML2STOML2
Entrez,  Source
stomatin (EPB72)-like 216520.140-0.0372No
14SNIPSNIP
Entrez,  Source
-17460.134-0.0407No
15TNNC1TNNC1
Entrez,  Source
troponin C type 1 (slow)17520.134-0.0373No
16SERP1SERP1
Entrez,  Source
-17710.133-0.0351No
17MYL3MYL3
Entrez,  Source
myosin, light chain 3, alkali; ventricular, skeletal, slow18440.129-0.0370No
18REPIN1REPIN1
Entrez,  Source
replication initiator 119090.126-0.0385No
19MRPL12MRPL12
Entrez,  Source
mitochondrial ribosomal protein L1219400.124-0.0373No
20CACNA1CCACNA1C
Entrez,  Source
calcium channel, voltage-dependent, L type, alpha 1C subunit19560.124-0.0351No
21LRPPRCLRPPRC
Entrez,  Source
leucine-rich PPR-motif containing20300.121-0.0373No
22ZWINTZWINT
Entrez,  Source
ZW10 interactor20550.119-0.0359No
23DMDDMD
Entrez,  Source
dystrophin (muscular dystrophy, Duchenne and Becker types)21460.116-0.0396No
24RB1RB1
Entrez,  Source
retinoblastoma 1 (including osteosarcoma)23070.110-0.0488No
25LYARLYAR
Entrez,  Source
-24620.104-0.0577No
26ABCA2ABCA2
Entrez,  Source
ATP-binding cassette, sub-family A (ABC1), member 227540.094-0.0774No
27HINT1HINT1
Entrez,  Source
histidine triad nucleotide binding protein 128350.090-0.0811No
28ATRXATRX
Entrez,  Source
alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae)28460.090-0.0794No
29SMC1ASMC1A
Entrez,  Source
structural maintenance of chromosomes 1A31090.081-0.0972No
30SUGT1SUGT1
Entrez,  Source
SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)31980.079-0.1018No
31EXOSC9EXOSC9
Entrez,  Source
exosome component 932210.078-0.1013No
32USH1CUSH1C
Entrez,  Source
Usher syndrome 1C (autosomal recessive, severe)33030.076-0.1054No
33DFNB31DFNB31
Entrez,  Source
deafness, autosomal recessive 3133140.076-0.1041No
34FLNBFLNB
Entrez,  Source
filamin B, beta (actin binding protein 278)33170.076-0.1022No
35DNALI1DNALI1
Entrez,  Source
dynein, axonemal, light intermediate chain 133300.075-0.1010No
36MRPL41MRPL41
Entrez,  Source
mitochondrial ribosomal protein L4133470.075-0.1002No
37DYNLL2DYNLL2
Entrez,  Source
dynein, light chain, LC8-type 234510.072-0.1061No
38MRPS15MRPS15
Entrez,  Source
mitochondrial ribosomal protein S1534960.071-0.1075No
39MYH6MYH6
Entrez,  Source
myosin, heavy chain 6, cardiac muscle, alpha (cardiomyopathy, hypertrophic 1)36030.069-0.1137No
40DKC1DKC1
Entrez,  Source
dyskeratosis congenita 1, dyskerin36270.068-0.1136No
41DYNC1I1DYNC1I1
Entrez,  Source
dynein, cytoplasmic 1, intermediate chain 137080.066-0.1179No
42NUDT21NUDT21
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 2139270.061-0.1329No
43SDAD1SDAD1
Entrez,  Source
SDA1 domain containing 139730.060-0.1347No
44ARHGDIBARHGDIB
Entrez,  Source
Rho GDP dissociation inhibitor (GDI) beta40030.059-0.1353No
45DRD2DRD2
Entrez,  Source
dopamine receptor D240370.059-0.1362No
46DEDDDEDD
Entrez,  Source
death effector domain containing41360.056-0.1421No
47DAG1DAG1
Entrez,  Source
dystroglycan 1 (dystrophin-associated glycoprotein 1)41710.056-0.1432No
48TNNI3TNNI3
Entrez,  Source
troponin I type 3 (cardiac)41960.055-0.1435No
49REXO4REXO4
Entrez,  Source
REX4, RNA exonuclease 4 homolog (S. cerevisiae)43430.052-0.1533No
50TTNTTN
Entrez,  Source
titin44010.050-0.1562No
51ARPC1AARPC1A
Entrez,  Source
actin related protein 2/3 complex, subunit 1A, 41kDa44190.050-0.1562No
52NR0B1NR0B1
Entrez,  Source
nuclear receptor subfamily 0, group B, member 145570.047-0.1654No
53TNNT2TNNT2
Entrez,  Source
troponin T type 2 (cardiac)45720.047-0.1651No
54NF2NF2
Entrez,  Source
neurofibromin 2 (bilateral acoustic neuroma)46060.046-0.1664No
55KLHDC3KLHDC3
Entrez,  Source
kelch domain containing 346320.046-0.1670No
56MAPTMAPT
Entrez,  Source
microtubule-associated protein tau48120.042-0.1796No
57UBE2IUBE2I
Entrez,  Source
ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)48290.041-0.1797No
58PNMA1PNMA1
Entrez,  Source
paraneoplastic antigen MA148790.040-0.1823No
59COILCOIL
Entrez,  Source
coilin49110.040-0.1836No
60DCXDCX
Entrez,  Source
doublecortex; lissencephaly, X-linked (doublecortin)50040.038-0.1896No
61PARP1PARP1
Entrez,  Source
poly (ADP-ribose) polymerase family, member 150260.037-0.1902No
62ACTR1BACTR1B
Entrez,  Source
ARP1 actin-related protein 1 homolog B, centractin beta (yeast)50680.037-0.1923No
63APPBP2APPBP2
Entrez,  Source
amyloid beta precursor protein (cytoplasmic tail) binding protein 251410.035-0.1969No
64ACTN3ACTN3
Entrez,  Source
actinin, alpha 351590.035-0.1972No
65STAG3STAG3
Entrez,  Source
stromal antigen 351670.035-0.1968No
66GABARAPL2GABARAPL2
Entrez,  Source
GABA(A) receptor-associated protein-like 253070.032-0.2066No
67CCNA1CCNA1
Entrez,  Source
cyclin A153450.031-0.2085No
68RGS12RGS12
Entrez,  Source
regulator of G-protein signalling 1253910.030-0.2111No
69TSC1TSC1
Entrez,  Source
tuberous sclerosis 155060.028-0.2191No
70AVILAVIL
Entrez,  Source
advillin55170.027-0.2191No
71AKAP4AKAP4
Entrez,  Source
A kinase (PRKA) anchor protein 455290.027-0.2192No
72CDH1CDH1
Entrez,  Source
cadherin 1, type 1, E-cadherin (epithelial)55580.026-0.2206No
73RPP38RPP38
Entrez,  Source
ribonuclease P/MRP 38kDa subunit55660.026-0.2204No
74MAFMAF
Entrez,  Source
v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)56340.025-0.2249No
75PSEN2PSEN2
Entrez,  Source
presenilin 2 (Alzheimer disease 4)56700.024-0.2269No
76EML2EML2
Entrez,  Source
echinoderm microtubule associated protein like 257140.023-0.2296No
77MKI67IPMKI67IP
Entrez,  Source
MKI67 (FHA domain) interacting nucleolar phosphoprotein58310.021-0.2378No
78HMGB1HMGB1
Entrez,  Source
high-mobility group box 158520.021-0.2388No
79FSCN3FSCN3
Entrez,  Source
fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)60450.017-0.2530No
80MYL2MYL2
Entrez,  Source
myosin, light chain 2, regulatory, cardiac, slow62930.012-0.2716No
81SLC4A1SLC4A1
Entrez,  Source
solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)64790.008-0.2855No
82IMP4IMP4
Entrez,  Source
IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)65570.007-0.2912No
83TOP2ATOP2A
Entrez,  Source
topoisomerase (DNA) II alpha 170kDa67090.004-0.3027No
84DNMT3ADNMT3A
Entrez,  Source
DNA (cytosine-5-)-methyltransferase 3 alpha67240.004-0.3037No
85JUNDJUND
Entrez,  Source
jun D proto-oncogene67510.003-0.3056No
86TNP1TNP1
Entrez,  Source
transition protein 1 (during histone to protamine replacement)67770.003-0.3074No
87ATG4BATG4B
Entrez,  Source
ATG4 autophagy related 4 homolog B (S. cerevisiae)67860.003-0.3080No
88CETN3CETN3
Entrez,  Source
centrin, EF-hand protein, 3 (CDC31 homolog, yeast)68560.001-0.3132No
89TOP1TOP1
Entrez,  Source
topoisomerase (DNA) I68690.001-0.3141No
90PSEN1PSEN1
Entrez,  Source
presenilin 1 (Alzheimer disease 3)6918-0.000-0.3178No
91TPT1TPT1
Entrez,  Source
tumor protein, translationally-controlled 16974-0.002-0.3219No
92MEFVMEFV
Entrez,  Source
Mediterranean fever7026-0.003-0.3258No
93ALS2ALS2
Entrez,  Source
amyotrophic lateral sclerosis 2 (juvenile)7100-0.004-0.3312No
94MRPS18AMRPS18A
Entrez,  Source
mitochondrial ribosomal protein S18A7193-0.006-0.3381No
95TRPC4TRPC4
Entrez,  Source
transient receptor potential cation channel, subfamily C, member 47210-0.006-0.3392No
96NOL3NOL3
Entrez,  Source
nucleolar protein 3 (apoptosis repressor with CARD domain)7231-0.007-0.3405No
97WASF2WASF2
Entrez,  Source
WAS protein family, member 27261-0.008-0.3425No
98DDX47DDX47
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 477269-0.008-0.3428No
99RPL35RPL35
Entrez,  Source
ribosomal protein L357279-0.008-0.3433No
100WASLWASL
Entrez,  Source
Wiskott-Aldrich syndrome-like7397-0.010-0.3520No
101UTRNUTRN
Entrez,  Source
utrophin (homologous to dystrophin)7645-0.015-0.3705No
102MRPL23MRPL23
Entrez,  Source
mitochondrial ribosomal protein L237650-0.016-0.3704No
103XRCC4XRCC4
Entrez,  Source
X-ray repair complementing defective repair in Chinese hamster cells 47672-0.016-0.3715No
104DDX56DDX56
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 567726-0.017-0.3751No
105MAP1AMAP1A
Entrez,  Source
microtubule-associated protein 1A7727-0.017-0.3746No
106IVLIVL
Entrez,  Source
involucrin7745-0.018-0.3755No
107KATNA1KATNA1
Entrez,  Source
katanin p60 (ATPase-containing) subunit A 17746-0.018-0.3750No
108MYH7MYH7
Entrez,  Source
myosin, heavy chain 7, cardiac muscle, beta7898-0.021-0.3860No
109AMPHAMPH
Entrez,  Source
amphiphysin (Stiff-Man syndrome with breast cancer 128kDa autoantigen)8098-0.025-0.4005No
110RPL3RPL3
Entrez,  Source
ribosomal protein L38109-0.026-0.4005No
111STAU1STAU1
Entrez,  Source
staufen, RNA binding protein, homolog 1 (Drosophila)8162-0.027-0.4038No
112KIF1BKIF1B
Entrez,  Source
kinesin family member 1B8176-0.027-0.4040No
113NPM1NPM1
Entrez,  Source
nucleophosmin (nucleolar phosphoprotein B23, numatrin)8204-0.028-0.4053No
114SYNPOSYNPO
Entrez,  Source
synaptopodin8210-0.028-0.4050No
115CDH23CDH23
Entrez,  Source
cadherin-like 238219-0.028-0.4048No
116IKBKAPIKBKAP
Entrez,  Source
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein8271-0.029-0.4079No
117KIF4AKIF4A
Entrez,  Source
kinesin family member 4A8274-0.029-0.4073No
118TINF2TINF2
Entrez,  Source
TERF1 (TRF1)-interacting nuclear factor 28295-0.030-0.4080No
119RPL9RPL9
Entrez,  Source
ribosomal protein L98332-0.031-0.4099No
120MARK1MARK1
Entrez,  Source
MAP/microtubule affinity-regulating kinase 18437-0.033-0.4169No
121ESPNESPN
Entrez,  Source
espin8501-0.034-0.4208No
122MYBBP1AMYBBP1A
Entrez,  Source
MYB binding protein (P160) 1a8546-0.036-0.4232No
123MYOM1MYOM1
Entrez,  Source
myomesin 1 (skelemin) 185kDa8685-0.039-0.4327No
124HAP1HAP1
Entrez,  Source
huntingtin-associated protein 1 (neuroan 1)8717-0.039-0.4340No
125MAP3K11MAP3K11
Entrez,  Source
mitogen-activated protein kinase kinase kinase 118842-0.042-0.4423No
126RAE1RAE1
Entrez,  Source
RAE1 RNA export 1 homolog (S. pombe)8844-0.042-0.4413No
127NUFIP1NUFIP1
Entrez,  Source
nuclear fragile X mental retardation protein interacting protein 19026-0.046-0.4538No
128RPL27RPL27
Entrez,  Source
ribosomal protein L279053-0.047-0.4545No
129NCLNCL
Entrez,  Source
nucleolin9096-0.049-0.4564No
130HIP1HIP1
Entrez,  Source
huntingtin interacting protein 19098-0.049-0.4551No
131TUBB2CTUBB2C
Entrez,  Source
tubulin, beta 2C9110-0.049-0.4546No
132GFAPGFAP
Entrez,  Source
glial fibrillary acidic protein9126-0.049-0.4544No
133NOLC1NOLC1
Entrez,  Source
nucleolar and coiled-body phosphoprotein 19128-0.050-0.4531No
134NOC4LNOC4L
Entrez,  Source
nucleolar complex associated 4 homolog (S. cerevisiae)9152-0.050-0.4535No
135ASNA1ASNA1
Entrez,  Source
arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)9162-0.050-0.4528No
136NPM2NPM2
Entrez,  Source
nucleophosmin/nucleoplasmin, 29187-0.051-0.4533No
137CIRH1ACIRH1A
Entrez,  Source
cirrhosis, autosomal recessive 1A (cirhin)9225-0.052-0.4547No
138RPS4XRPS4X
Entrez,  Source
ribosomal protein S4, X-linked9239-0.052-0.4542No
139STOMSTOM
Entrez,  Source
stomatin9313-0.055-0.4583No
140RPL15RPL15
Entrez,  Source
ribosomal protein L159322-0.055-0.4574No
141MARCKSMARCKS
Entrez,  Source
myristoylated alanine-rich protein kinase C substrate9387-0.057-0.4607No
142ACTL7BACTL7B
Entrez,  Source
actin-like 7B9475-0.059-0.4658No
143ARPC5ARPC5
Entrez,  Source
actin related protein 2/3 complex, subunit 5, 16kDa9496-0.060-0.4657No
144GNL3GNL3
Entrez,  Source
guanine nucleotide binding protein-like 3 (nucleolar)9498-0.060-0.4641No
145RANRAN
Entrez,  Source
RAN, member RAS oncogene family9534-0.061-0.4651No
146ZW10ZW10
Entrez,  Source
ZW10, kinetochore associated, homolog (Drosophila)9627-0.063-0.4704No
147CABP1CABP1
Entrez,  Source
calcium binding protein 1 (calbrain)9694-0.065-0.4737No
148ACTC1ACTC1
Entrez,  Source
actin, alpha, cardiac muscle 19699-0.065-0.4722No
149JUNJUN
Entrez,  Source
jun oncogene9748-0.066-0.4740No
150PTPN21PTPN21
Entrez,  Source
protein tyrosine phosphatase, non-receptor type 219804-0.068-0.4763No
151HMGN1HMGN1
Entrez,  Source
high-mobility group nucleosome binding domain 19807-0.069-0.4746No
152TUBG1TUBG1
Entrez,  Source
tubulin, gamma 19827-0.069-0.4742No
153CAPZA2CAPZA2
Entrez,  Source
capping protein (actin filament) muscle Z-line, alpha 29837-0.069-0.4729No
154RPS11RPS11
Entrez,  Source
ribosomal protein S119846-0.070-0.4716No
155KALRNKALRN
Entrez,  Source
kalirin, RhoGEF kinase9923-0.072-0.4754No
156ARHGDIAARHGDIA
Entrez,  Source
Rho GDP dissociation inhibitor (GDI) alpha9931-0.073-0.4740No
157BRCA2BRCA2
Entrez,  Source
breast cancer 2, early onset10026-0.075-0.4791No
158APTXAPTX
Entrez,  Source
aprataxin10045-0.076-0.4784No
159RPL11RPL11
Entrez,  Source
ribosomal protein L1110109-0.079-0.4811No
160MYO9BMYO9B
Entrez,  Source
myosin IXB10160-0.080-0.4827No
161ACTR2ACTR2
Entrez,  Source
ARP2 actin-related protein 2 homolog (yeast)10226-0.082-0.4854No
162PLK1PLK1
Entrez,  Source
polo-like kinase 1 (Drosophila)10276-0.084-0.4868Yes
163SIRT2SIRT2
Entrez,  Source
sirtuin (silent mating type information regulation 2 homolog) 2 (S. cerevisiae)10295-0.085-0.4859Yes
164APCAPC
Entrez,  Source
adenomatosis polyposis coli10296-0.085-0.4836Yes
165DCTN2DCTN2
Entrez,  Source
dynactin 2 (p50)10303-0.085-0.4817Yes
166APEX1APEX1
Entrez,  Source
APEX nuclease (multifunctional DNA repair enzyme) 110323-0.086-0.4808Yes
167H2AFYH2AFY
Entrez,  Source
H2A histone family, member Y10360-0.087-0.4811Yes
168ARPC1BARPC1B
Entrez,  Source
actin related protein 2/3 complex, subunit 1B, 41kDa10374-0.087-0.4797Yes
169CTNNB1CTNNB1
Entrez,  Source
catenin (cadherin-associated protein), beta 1, 88kDa10376-0.087-0.4774Yes
170BUB1BBUB1B
Entrez,  Source
BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast)10391-0.088-0.4761Yes
171MORF4L2MORF4L2
Entrez,  Source
mortality factor 4 like 210413-0.089-0.4752Yes
172SC65SC65
Entrez,  Source
-10443-0.090-0.4750Yes
173ACTBACTB
Entrez,  Source
actin, beta10590-0.095-0.4835Yes
174CETN1CETN1
Entrez,  Source
centrin, EF-hand protein, 110599-0.095-0.4815Yes
175PCNAPCNA
Entrez,  Source
proliferating cell nuclear antigen10651-0.097-0.4828Yes
176KIF5AKIF5A
Entrez,  Source
kinesin family member 5A10741-0.100-0.4868Yes
177KATNB1KATNB1
Entrez,  Source
katanin p80 (WD repeat containing) subunit B 110749-0.101-0.4846Yes
178ABLIM2ABLIM2
Entrez,  Source
actin binding LIM protein family, member 210755-0.101-0.4822Yes
179CCT3CCT3
Entrez,  Source
chaperonin containing TCP1, subunit 3 (gamma)10769-0.102-0.4804Yes
180RFC1RFC1
Entrez,  Source
replication factor C (activator 1) 1, 145kDa10774-0.102-0.4779Yes
181PAFAH1B1PAFAH1B1
Entrez,  Source
platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa10819-0.104-0.4784Yes
182NOL5ANOL5A
Entrez,  Source
nucleolar protein 5A (56kDa with KKE/D repeat)10849-0.105-0.4777Yes
183LYSTLYST
Entrez,  Source
lysosomal trafficking regulator10864-0.105-0.4759Yes
184RPS19RPS19
Entrez,  Source
ribosomal protein S1910892-0.106-0.4750Yes
185DDX20DDX20
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 2010894-0.106-0.4722Yes
186CTTNCTTN
Entrez,  Source
cortactin10911-0.107-0.4705Yes
187SLC9A3R1SLC9A3R1
Entrez,  Source
solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 110921-0.108-0.4682Yes
188CAPZBCAPZB
Entrez,  Source
capping protein (actin filament) muscle Z-line, beta10922-0.108-0.4652Yes
189RPL13ARPL13A
Entrez,  Source
ribosomal protein L13a10925-0.108-0.4624Yes
190BMFBMF
Entrez,  Source
Bcl2 modifying factor10943-0.109-0.4607Yes
191SLC29A2SLC29A2
Entrez,  Source
solute carrier family 29 (nucleoside transporters), member 210955-0.109-0.4585Yes
192BUB3BUB3
Entrez,  Source
BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast)10991-0.111-0.4581Yes
193UBTFUBTF
Entrez,  Source
upstream binding transcription factor, RNA polymerase I11089-0.116-0.4624Yes
194CDC20CDC20
Entrez,  Source
CDC20 cell division cycle 20 homolog (S. cerevisiae)11099-0.117-0.4599Yes
195ARHGEF2ARHGEF2
Entrez,  Source
rho/rac guanine nucleotide exchange factor (GEF) 211105-0.117-0.4570Yes
196BIRC5BIRC5
Entrez,  Source
baculoviral IAP repeat-containing 5 (survivin)11117-0.118-0.4546Yes
197LSP1LSP1
Entrez,  Source
lymphocyte-specific protein 111156-0.119-0.4542Yes
198CDC42BPBCDC42BPB
Entrez,  Source
CDC42 binding protein kinase beta (DMPK-like)11232-0.123-0.4566Yes
199AKAP9AKAP9
Entrez,  Source
A kinase (PRKA) anchor protein (yotiao) 911273-0.125-0.4562Yes
200DDX24DDX24
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 2411281-0.126-0.4533Yes
201POLBPOLB
Entrez,  Source
polymerase (DNA directed), beta11294-0.126-0.4507Yes
202TBCETBCE
Entrez,  Source
tubulin-specific chaperone e11303-0.127-0.4478Yes
203DYNC1LI2DYNC1LI2
Entrez,  Source
dynein, cytoplasmic 1, light intermediate chain 211327-0.128-0.4461Yes
204LMNB1LMNB1
Entrez,  Source
lamin B111329-0.128-0.4427Yes
205DCTN1DCTN1
Entrez,  Source
dynactin 1 (p150, glued homolog, Drosophila)11343-0.128-0.4401Yes
206RPP40RPP40
Entrez,  Source
ribonuclease P 40kDa subunit11387-0.130-0.4398Yes
207CASP8CASP8
Entrez,  Source
caspase 8, apoptosis-related cysteine peptidase11401-0.131-0.4372Yes
208CDC16CDC16
Entrez,  Source
CDC16 cell division cycle 16 homolog (S. cerevisiae)11467-0.135-0.4385Yes
209TUBGCP3TUBGCP3
Entrez,  Source
tubulin, gamma complex associated protein 311484-0.136-0.4359Yes
210TPM3TPM3
Entrez,  Source
tropomyosin 311497-0.137-0.4331Yes
211GAS8GAS8
Entrez,  Source
growth arrest-specific 811506-0.138-0.4299Yes
212SMTNSMTN
Entrez,  Source
smoothelin11525-0.139-0.4275Yes
213SEPT7SEPT7
Entrez,  Source
septin 711577-0.142-0.4274Yes
214ACTR3ACTR3
Entrez,  Source
ARP3 actin-related protein 3 homolog (yeast)11578-0.142-0.4235Yes
215RPA2RPA2
Entrez,  Source
replication protein A2, 32kDa11589-0.143-0.4204Yes
216NDE1NDE1
Entrez,  Source
nudE nuclear distribution gene E homolog 1 (A. nidulans)11603-0.144-0.4174Yes
217MYH10MYH10
Entrez,  Source
myosin, heavy chain 10, non-muscle11608-0.144-0.4137Yes
218SEPT9SEPT9
Entrez,  Source
septin 911618-0.145-0.4104Yes
219MYO1CMYO1C
Entrez,  Source
myosin IC11628-0.145-0.4071Yes
220CALD1CALD1
Entrez,  Source
caldesmon 111630-0.145-0.4032Yes
221CDC27CDC27
Entrez,  Source
cell division cycle 2711658-0.148-0.4012Yes
222PTBP1PTBP1
Entrez,  Source
polypyrimidine tract binding protein 111675-0.148-0.3984Yes
223TP53TP53
Entrez,  Source
tumor protein p53 (Li-Fraumeni syndrome)11690-0.149-0.3953Yes
224NEDD9NEDD9
Entrez,  Source
neural precursor cell expressed, developmentally down-regulated 911695-0.149-0.3915Yes
225DYNLL1DYNLL1
Entrez,  Source
dynein, light chain, LC8-type 111702-0.150-0.3879Yes
226KIF5BKIF5B
Entrez,  Source
kinesin family member 5B11762-0.153-0.3881Yes
227PXNPXN
Entrez,  Source
paxillin11831-0.159-0.3890Yes
228TERF2IPTERF2IP
Entrez,  Source
telomeric repeat binding factor 2, interacting protein11858-0.161-0.3865Yes
229PCM1PCM1
Entrez,  Source
pericentriolar material 111860-0.161-0.3822Yes
230KIF2CKIF2C
Entrez,  Source
kinesin family member 2C11889-0.164-0.3798Yes
231SMC4SMC4
Entrez,  Source
structural maintenance of chromosomes 411916-0.167-0.3772Yes
232KIFC3KIFC3
Entrez,  Source
kinesin family member C311973-0.171-0.3768Yes
233RFC2RFC2
Entrez,  Source
replication factor C (activator 1) 2, 40kDa11987-0.172-0.3731Yes
234CDK5RAP2CDK5RAP2
Entrez,  Source
CDK5 regulatory subunit associated protein 211990-0.172-0.3685Yes
235SMC3SMC3
Entrez,  Source
structural maintenance of chromosomes 312021-0.175-0.3660Yes
236WASF1WASF1
Entrez,  Source
WAS protein family, member 112111-0.182-0.3678Yes
237TSGA14TSGA14
Entrez,  Source
testis specific, 1412175-0.189-0.3674Yes
238MAPRE1MAPRE1
Entrez,  Source
microtubule-associated protein, RP/EB family, member 112234-0.197-0.3664Yes
239SORBS2SORBS2
Entrez,  Source
sorbin and SH3 domain containing 212297-0.204-0.3655Yes
240GSNGSN
Entrez,  Source
gelsolin (amyloidosis, Finnish type)12307-0.205-0.3605Yes
241HDAC6HDAC6
Entrez,  Source
histone deacetylase 612329-0.208-0.3564Yes
242CLIC5CLIC5
Entrez,  Source
chloride intracellular channel 512338-0.209-0.3513Yes
243TMPOTMPO
Entrez,  Source
thymopoietin12402-0.215-0.3502Yes
244LASP1LASP1
Entrez,  Source
LIM and SH3 protein 112412-0.216-0.3449Yes
245PTK2PTK2
Entrez,  Source
PTK2 protein tyrosine kinase 212413-0.216-0.3390Yes
246BIN1BIN1
Entrez,  Source
bridging integrator 112429-0.219-0.3341Yes
247FMR1FMR1
Entrez,  Source
fragile X mental retardation 112443-0.220-0.3290Yes
248MID1MID1
Entrez,  Source
midline 1 (Opitz/BBB syndrome)12463-0.223-0.3244Yes
249KIF3CKIF3C
Entrez,  Source
kinesin family member 3C12481-0.225-0.3195Yes
250DCTN4DCTN4
Entrez,  Source
dynactin 4 (p62)12513-0.230-0.3155Yes
251NUMA1NUMA1
Entrez,  Source
nuclear mitotic apparatus protein 112531-0.233-0.3104Yes
252CLASP2CLASP2
Entrez,  Source
cytoplasmic linker associated protein 212533-0.233-0.3041Yes
253AURKAAURKA
Entrez,  Source
aurora kinase A12548-0.235-0.2986Yes
254TPM4TPM4
Entrez,  Source
tropomyosin 412551-0.235-0.2923Yes
255MYH9MYH9
Entrez,  Source
myosin, heavy chain 9, non-muscle12585-0.241-0.2882Yes
256DSPDSP
Entrez,  Source
desmoplakin12592-0.244-0.2820Yes
257BASP1BASP1
Entrez,  Source
brain abundant, membrane attached signal protein 112594-0.244-0.2753Yes
258RFC3RFC3
Entrez,  Source
replication factor C (activator 1) 3, 38kDa12611-0.247-0.2697Yes
259CKAP5CKAP5
Entrez,  Source
cytoskeleton associated protein 512613-0.247-0.2630Yes
260CASKCASK
Entrez,  Source
calcium/calmodulin-dependent serine protein kinase (MAGUK family)12614-0.247-0.2562Yes
261TIMELESSTIMELESS
Entrez,  Source
timeless homolog (Drosophila)12644-0.253-0.2514Yes
262KIF22KIF22
Entrez,  Source
kinesin family member 2212713-0.267-0.2493Yes
263CLIC4CLIC4
Entrez,  Source
chloride intracellular channel 412732-0.272-0.2432Yes
264CHEK1CHEK1
Entrez,  Source
CHK1 checkpoint homolog (S. pombe)12821-0.294-0.2418Yes
265KLHL7KLHL7
Entrez,  Source
kelch-like 7 (Drosophila)12875-0.311-0.2373Yes
266HSPB1HSPB1
Entrez,  Source
heat shock 27kDa protein 112892-0.318-0.2298Yes
267CLASP1CLASP1
Entrez,  Source
cytoplasmic linker associated protein 112909-0.326-0.2221Yes
268MAP1BMAP1B
Entrez,  Source
microtubule-associated protein 1B12944-0.337-0.2154Yes
269CCNB2CCNB2
Entrez,  Source
cyclin B212954-0.340-0.2067Yes
270TUBBTUBB
Entrez,  Source
tubulin, beta12961-0.344-0.1977Yes
271TPM1TPM1
Entrez,  Source
tropomyosin 1 (alpha)12998-0.364-0.1904Yes
272CAPGCAPG
Entrez,  Source
capping protein (actin filament), gelsolin-like13018-0.375-0.1816Yes
273MCM7MCM7
Entrez,  Source
MCM7 minichromosome maintenance deficient 7 (S. cerevisiae)13028-0.381-0.1718Yes
274CDKN2ACDKN2A
Entrez,  Source
cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)13099-0.425-0.1654Yes
275CEP57CEP57
Entrez,  Source
centrosomal protein 57kDa13119-0.442-0.1547Yes
276VIMVIM
Entrez,  Source
vimentin13164-0.501-0.1443Yes
277PDLIM5PDLIM5
Entrez,  Source
PDZ and LIM domain 513173-0.513-0.1307Yes
278PAMPAM
Entrez,  Source
peptidylglycine alpha-amidating monooxygenase13208-0.576-0.1175Yes
279MSNMSN
Entrez,  Source
moesin13302-0.941-0.0987Yes
280NEFLNEFL
Entrez,  Source
neurofilament, light polypeptide 68kDa13304-0.959-0.0723Yes
281ANXA1ANXA1
Entrez,  Source
annexin A113327-1.146-0.0425Yes
282ACTA1ACTA1
Entrez,  Source
actin, alpha 1, skeletal muscle13340-1.5810.0002Yes
Table: GSEA details [plain text format]



Fig 2: INTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: INTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE: Random ES distribution   
Gene set null distribution of ES for INTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE