Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | single_gel_8d |
| GeneSet | JNK_UP |
| Enrichment Score (ES) | -0.70608866 |
| Normalized Enrichment Score (NES) | -1.8047353 |
| Nominal p-value | 0.001934236 |
| FDR q-value | 0.046745867 |
| FWER p-Value | 0.902 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | TGFBI | TGFBI Entrez, Source | transforming growth factor, beta-induced, 68kDa | 1217 | 0.169 | -0.0488 | No |
| 2 | CCL5 | CCL5 Entrez, Source | chemokine (C-C motif) ligand 5 | 2781 | 0.092 | -0.1429 | No |
| 3 | XRCC5 | XRCC5 Entrez, Source | X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining; Ku autoantigen, 80kDa) | 2976 | 0.086 | -0.1360 | No |
| 4 | SHOX2 | SHOX2 Entrez, Source | short stature homeobox 2 | 2987 | 0.085 | -0.1153 | No |
| 5 | CXCL10 | CXCL10 Entrez, Source | chemokine (C-X-C motif) ligand 10 | 5128 | 0.035 | -0.2670 | No |
| 6 | FOXP1 | FOXP1 Entrez, Source | forkhead box P1 | 6378 | 0.010 | -0.3582 | No |
| 7 | IL1RL1 | IL1RL1 Entrez, Source | interleukin 1 receptor-like 1 | 8104 | -0.026 | -0.4813 | No |
| 8 | TCF8 | TCF8 Entrez, Source | transcription factor 8 (represses interleukin 2 expression) | 8543 | -0.036 | -0.5052 | No |
| 9 | CYR61 | CYR61 Entrez, Source | cysteine-rich, angiogenic inducer, 61 | 9477 | -0.059 | -0.5604 | No |
| 10 | JUN | JUN Entrez, Source | jun oncogene | 9748 | -0.066 | -0.5639 | No |
| 11 | HIP1R | HIP1R Entrez, Source | huntingtin interacting protein 1 related | 10271 | -0.084 | -0.5821 | No |
| 12 | TNK2 | TNK2 Entrez, Source | tyrosine kinase, non-receptor, 2 | 11023 | -0.113 | -0.6100 | No |
| 13 | IMPACT | IMPACT Entrez, Source | Impact homolog (mouse) | 11924 | -0.167 | -0.6355 | Yes |
| 14 | CD276 | CD276 Entrez, Source | CD276 molecule | 12865 | -0.308 | -0.6286 | Yes |
| 15 | RUNX1 | RUNX1 Entrez, Source | runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) | 12949 | -0.338 | -0.5498 | Yes |
| 16 | SGK | SGK Entrez, Source | serum/glucocorticoid regulated kinase | 12997 | -0.362 | -0.4623 | Yes |
| 17 | CCND2 | CCND2 Entrez, Source | cyclin D2 | 13016 | -0.374 | -0.3695 | Yes |
| 18 | ANGPTL2 | ANGPTL2 Entrez, Source | angiopoietin-like 2 | 13205 | -0.574 | -0.2391 | Yes |
| 19 | LOX | LOX Entrez, Source | lysyl oxidase | 13308 | -0.991 | 0.0026 | Yes |
