Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | single_gel_8d |
| GeneSet | LEUKOCYTE_ACTIVATION |
| Enrichment Score (ES) | -0.5501158 |
| Normalized Enrichment Score (NES) | -1.6257434 |
| Nominal p-value | 0.013888889 |
| FDR q-value | 0.10565966 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | PTPRC | PTPRC Entrez, Source | protein tyrosine phosphatase, receptor type, C | 1238 | 0.168 | -0.0529 | No |
| 2 | CD40LG | CD40LG Entrez, Source | CD40 ligand (TNF superfamily, member 5, hyper-IgM syndrome) | 1443 | 0.154 | -0.0315 | No |
| 3 | IL2 | IL2 Entrez, Source | interleukin 2 | 2505 | 0.102 | -0.0867 | No |
| 4 | SFTPD | SFTPD Entrez, Source | surfactant, pulmonary-associated protein D | 3017 | 0.084 | -0.1049 | No |
| 5 | TLR4 | TLR4 Entrez, Source | toll-like receptor 4 | 3273 | 0.077 | -0.1057 | No |
| 6 | CD4 | CD4 Entrez, Source | CD4 molecule | 3460 | 0.072 | -0.1024 | No |
| 7 | INHA | INHA Entrez, Source | inhibin, alpha | 4183 | 0.055 | -0.1434 | No |
| 8 | HDAC5 | HDAC5 Entrez, Source | histone deacetylase 5 | 4333 | 0.052 | -0.1422 | No |
| 9 | IL4 | IL4 Entrez, Source | interleukin 4 | 4550 | 0.047 | -0.1471 | No |
| 10 | IL12A | IL12A Entrez, Source | interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35) | 4872 | 0.040 | -0.1615 | No |
| 11 | CD2 | CD2 Entrez, Source | CD2 molecule | 4873 | 0.040 | -0.1519 | No |
| 12 | IL8RB | IL8RB Entrez, Source | interleukin 8 receptor, beta | 5537 | 0.027 | -0.1952 | No |
| 13 | GLMN | GLMN Entrez, Source | glomulin, FKBP associated protein | 5660 | 0.024 | -0.1986 | No |
| 14 | IL12B | IL12B Entrez, Source | interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) | 5931 | 0.020 | -0.2141 | No |
| 15 | JAG2 | JAG2 Entrez, Source | jagged 2 | 6015 | 0.018 | -0.2160 | No |
| 16 | LST1 | LST1 Entrez, Source | leukocyte specific transcript 1 | 7191 | -0.006 | -0.3029 | No |
| 17 | INHBA | INHBA Entrez, Source | inhibin, beta A (activin A, activin AB alpha polypeptide) | 7375 | -0.010 | -0.3143 | No |
| 18 | THY1 | THY1 Entrez, Source | Thy-1 cell surface antigen | 7638 | -0.015 | -0.3303 | No |
| 19 | IL7 | IL7 Entrez, Source | interleukin 7 | 7643 | -0.015 | -0.3269 | No |
| 20 | TNFSF13 | TNFSF13 Entrez, Source | tumor necrosis factor (ligand) superfamily, member 13 | 7907 | -0.021 | -0.3416 | No |
| 21 | LAT | LAT Entrez, Source | linker for activation of T cells | 8330 | -0.031 | -0.3659 | No |
| 22 | CD3D | CD3D Entrez, Source | CD3d molecule, delta (CD3-TCR complex) | 9132 | -0.050 | -0.4143 | No |
| 23 | SART1 | SART1 Entrez, Source | squamous cell carcinoma antigen recognised by T cells | 9247 | -0.053 | -0.4102 | No |
| 24 | CX3CL1 | CX3CL1 Entrez, Source | chemokine (C-X3-C motif) ligand 1 | 11035 | -0.114 | -0.5173 | No |
| 25 | CD47 | CD47 Entrez, Source | CD47 molecule | 11473 | -0.136 | -0.5177 | Yes |
| 26 | CD28 | CD28 Entrez, Source | CD28 molecule | 11745 | -0.152 | -0.5017 | Yes |
| 27 | HDAC7A | HDAC7A Entrez, Source | histone deacetylase 7A | 12032 | -0.176 | -0.4812 | Yes |
| 28 | IL18 | IL18 Entrez, Source | interleukin 18 (interferon-gamma-inducing factor) | 12497 | -0.228 | -0.4614 | Yes |
| 29 | CD276 | CD276 Entrez, Source | CD276 molecule | 12865 | -0.308 | -0.4153 | Yes |
| 30 | TGFB1 | TGFB1 Entrez, Source | transforming growth factor, beta 1 (Camurati-Engelmann disease) | 13047 | -0.395 | -0.3345 | Yes |
| 31 | CD24 | CD24 Entrez, Source | CD24 molecule | 13337 | -1.491 | 0.0004 | Yes |
