Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | LIPID_TRANSPORT |
| Enrichment Score (ES) | 0.6645461 |
| Normalized Enrichment Score (NES) | 1.8525805 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.008550188 |
| FWER p-Value | 0.688 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | APOA2 | APOA2 Entrez, Source | apolipoprotein A-II | 7 | 1.206 | 0.2203 | Yes |
| 2 | LCAT | LCAT Entrez, Source | lecithin-cholesterol acyltransferase | 76 | 0.677 | 0.3393 | Yes |
| 3 | APOA4 | APOA4 Entrez, Source | apolipoprotein A-IV | 96 | 0.620 | 0.4514 | Yes |
| 4 | SLCO2A1 | SLCO2A1 Entrez, Source | solute carrier organic anion transporter family, member 2A1 | 179 | 0.495 | 0.5359 | Yes |
| 5 | LDLR | LDLR Entrez, Source | low density lipoprotein receptor (familial hypercholesterolemia) | 592 | 0.270 | 0.5544 | Yes |
| 6 | PPARA | PPARA Entrez, Source | peroxisome proliferative activated receptor, alpha | 732 | 0.231 | 0.5863 | Yes |
| 7 | CHKA | CHKA Entrez, Source | choline kinase alpha | 984 | 0.196 | 0.6033 | Yes |
| 8 | APOA1 | APOA1 Entrez, Source | apolipoprotein A-I | 1052 | 0.187 | 0.6325 | Yes |
| 9 | ABCD3 | ABCD3 Entrez, Source | ATP-binding cassette, sub-family D (ALD), member 3 | 1076 | 0.184 | 0.6645 | Yes |
| 10 | APOC3 | APOC3 Entrez, Source | apolipoprotein C-III | 1478 | 0.151 | 0.6621 | No |
| 11 | ABCA2 | ABCA2 Entrez, Source | ATP-binding cassette, sub-family A (ABC1), member 2 | 2754 | 0.094 | 0.5835 | No |
| 12 | PPARD | PPARD Entrez, Source | peroxisome proliferative activated receptor, delta | 3231 | 0.078 | 0.5620 | No |
| 13 | APOE | APOE Entrez, Source | apolipoprotein E | 5056 | 0.037 | 0.4319 | No |
| 14 | TSPO | TSPO Entrez, Source | translocator protein (18kDa) | 5475 | 0.028 | 0.4057 | No |
| 15 | GOT2 | GOT2 Entrez, Source | glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) | 7234 | -0.007 | 0.2750 | No |
| 16 | PSAP | PSAP Entrez, Source | prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) | 8783 | -0.040 | 0.1662 | No |
| 17 | STX12 | STX12 Entrez, Source | syntaxin 12 | 9047 | -0.047 | 0.1551 | No |
| 18 | SLC27A4 | SLC27A4 Entrez, Source | solute carrier family 27 (fatty acid transporter), member 4 | 10628 | -0.096 | 0.0541 | No |
| 19 | NPC2 | NPC2 Entrez, Source | Niemann-Pick disease, type C2 | 11880 | -0.163 | -0.0099 | No |
| 20 | ABCA1 | ABCA1 Entrez, Source | ATP-binding cassette, sub-family A (ABC1), member 1 | 12519 | -0.231 | -0.0155 | No |
| 21 | ABCG1 | ABCG1 Entrez, Source | ATP-binding cassette, sub-family G (WHITE), member 1 | 13094 | -0.421 | 0.0186 | No |
