Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_single_gel_8d.class.cls
#double_gel_8d_versus_single_gel_8d_repos
Phenotypeclass.cls#double_gel_8d_versus_single_gel_8d_repos
Upregulated in classdouble_gel_8d
GeneSetMITOCHONDRIA
Enrichment Score (ES)0.4835339
Normalized Enrichment Score (NES)2.0315182
Nominal p-value0.0
FDR q-value0.0012169083
FWER p-Value0.089
Table: GSEA Results Summary



Fig 1: Enrichment plot: MITOCHONDRIA   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GLYATGLYAT
Entrez,  Source
glycine-N-acyltransferase101.1210.0284Yes
2EHHADHEHHADH
Entrez,  Source
enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase240.8640.0499Yes
3OTCOTC
Entrez,  Source
ornithine carbamoyltransferase490.7650.0680Yes
4BCL2A1BCL2A1
Entrez,  Source
BCL2-related protein A1530.7400.0870Yes
5PDK4PDK4
Entrez,  Source
pyruvate dehydrogenase kinase, isozyme 4580.7260.1056Yes
6LCATLCAT
Entrez,  Source
lecithin-cholesterol acyltransferase760.6770.1219Yes
7PCPC
Entrez,  Source
pyruvate carboxylase790.6520.1387Yes
8CYP2E1CYP2E1
Entrez,  Source
cytochrome P450, family 2, subfamily E, polypeptide 1870.6370.1548Yes
9CPS1CPS1
Entrez,  Source
carbamoyl-phosphate synthetase 1, mitochondrial910.6310.1709Yes
10SLC25A15SLC25A15
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 151130.5970.1849Yes
11PDK1PDK1
Entrez,  Source
pyruvate dehydrogenase kinase, isozyme 11430.5450.1968Yes
12PKLRPKLR
Entrez,  Source
pyruvate kinase, liver and RBC1840.4870.2065Yes
13TATTAT
Entrez,  Source
tyrosine aminotransferase2210.4570.2156Yes
14SARDHSARDH
Entrez,  Source
sarcosine dehydrogenase2450.4380.2252Yes
15GCKGCK
Entrez,  Source
glucokinase (hexokinase 4, maturity onset diabetes of the young 2)2590.4270.2353Yes
16ECHS1ECHS1
Entrez,  Source
enoyl Coenzyme A hydratase, short chain, 1, mitochondrial2600.4270.2465Yes
17BCKDHBBCKDHB
Entrez,  Source
branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease)2710.4190.2566Yes
18HMGCLHMGCL
Entrez,  Source
3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase (hydroxymethylglutaricaciduria)3440.3710.2607Yes
19HMGCS2HMGCS2
Entrez,  Source
3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial)3600.3580.2689Yes
20ETFDHETFDH
Entrez,  Source
electron-transferring-flavoprotein dehydrogenase3630.3570.2780Yes
21ACAA2ACAA2
Entrez,  Source
acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)3740.3530.2865Yes
22PORPOR
Entrez,  Source
P450 (cytochrome) oxidoreductase3840.3460.2948Yes
23BCKDHABCKDHA
Entrez,  Source
branched chain keto acid dehydrogenase E1, alpha polypeptide3890.3440.3034Yes
24SOD2SOD2
Entrez,  Source
superoxide dismutase 2, mitochondrial3910.3430.3123Yes
25TIMM8ATIMM8A
Entrez,  Source
translocase of inner mitochondrial membrane 8 homolog A (yeast)4120.3360.3195Yes
26ACAT1ACAT1
Entrez,  Source
acetyl-Coenzyme A acetyltransferase 1 (acetoacetyl Coenzyme A thiolase)4300.3290.3268Yes
27ABATABAT
Entrez,  Source
4-aminobutyrate aminotransferase4500.3200.3336Yes
28SLC25A22SLC25A22
Entrez,  Source
solute carrier family 25 (mitochondrial carrier: glutamate), member 224880.3050.3387Yes
29AMACRAMACR
Entrez,  Source
alpha-methylacyl-CoA racemase5330.2890.3429Yes
30ACADVLACADVL
Entrez,  Source
acyl-Coenzyme A dehydrogenase, very long chain5370.2880.3502Yes
31CYP27A1CYP27A1
Entrez,  Source
cytochrome P450, family 27, subfamily A, polypeptide 15780.2740.3542Yes
32SLC25A10SLC25A10
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 106420.2550.3561Yes
33DCIDCI
Entrez,  Source
dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase)6600.2500.3613Yes
34FXC1FXC1
Entrez,  Source
fracture callus 1 homolog (rat)6960.2390.3648Yes
35SLC25A20SLC25A20
Entrez,  Source
solute carrier family 25 (carnitine/acylcarnitine translocase), member 207590.2260.3660Yes
36CLPXCLPX
Entrez,  Source
ClpX caseinolytic peptidase X homolog (E. coli)7850.2210.3698Yes
37DBTDBT
Entrez,  Source
dihydrolipoamide branched chain transacylase E27990.2200.3746Yes
38TIMM9TIMM9
Entrez,  Source
translocase of inner mitochondrial membrane 9 homolog (yeast)8280.2160.3781Yes
39ALAS1ALAS1
Entrez,  Source
aminolevulinate, delta-, synthase 18390.2150.3829Yes
40PDHBPDHB
Entrez,  Source
pyruvate dehydrogenase (lipoamide) beta8580.2130.3870Yes
41ETFBETFB
Entrez,  Source
electron-transfer-flavoprotein, beta polypeptide8650.2120.3921Yes
42ATP5G1ATP5G1
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)8780.2100.3967Yes
43AK2AK2
Entrez,  Source
adenylate kinase 28800.2100.4020Yes
44CATCAT
Entrez,  Source
catalase8840.2090.4073Yes
45TSTTST
Entrez,  Source
thiosulfate sulfurtransferase (rhodanese)9260.2030.4094Yes
46CYP7A1CYP7A1
Entrez,  Source
cytochrome P450, family 7, subfamily A, polypeptide 19340.2020.4141Yes
47SLC25A1SLC25A1
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; citrate transporter), member 19460.2000.4185Yes
48CPT1ACPT1A
Entrez,  Source
carnitine palmitoyltransferase 1A (liver)9500.2000.4235Yes
49GNASGNAS
Entrez,  Source
GNAS complex locus9680.1980.4273Yes
50TXN2TXN2
Entrez,  Source
thioredoxin 210190.1900.4285Yes
51MTHFD1MTHFD1
Entrez,  Source
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase10500.1870.4310Yes
52SHMT2SHMT2
Entrez,  Source
serine hydroxymethyltransferase 2 (mitochondrial)11050.1810.4316Yes
53ACADSBACADSB
Entrez,  Source
acyl-Coenzyme A dehydrogenase, short/branched chain11580.1750.4322Yes
54NDUFV2NDUFV2
Entrez,  Source
NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa11610.1750.4366Yes
55CABC1CABC1
Entrez,  Source
chaperone, ABC1 activity of bc1 complex homolog (S. pombe)12680.1660.4328Yes
56PRDX3PRDX3
Entrez,  Source
peroxiredoxin 312740.1660.4367Yes
57CPT1BCPT1B
Entrez,  Source
carnitine palmitoyltransferase 1B (muscle)12780.1650.4408Yes
58POLGPOLG
Entrez,  Source
polymerase (DNA directed), gamma12880.1650.4444Yes
59ACADSACADS
Entrez,  Source
acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain12960.1640.4482Yes
60DECR1DECR1
Entrez,  Source
2,4-dienoyl CoA reductase 1, mitochondrial13150.1630.4510Yes
61HADHAHADHA
Entrez,  Source
hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit13990.1570.4488Yes
62SDHDSDHD
Entrez,  Source
succinate dehydrogenase complex, subunit D, integral membrane protein14040.1570.4525Yes
63TFB2MTFB2M
Entrez,  Source
transcription factor B2, mitochondrial14180.1560.4556Yes
64AFG3L2AFG3L2
Entrez,  Source
AFG3 ATPase family gene 3-like 2 (yeast)14490.1530.4573Yes
65OATOAT
Entrez,  Source
ornithine aminotransferase (gyrate atrophy)14600.1520.4605Yes
66COQ7COQ7
Entrez,  Source
coenzyme Q7 homolog, ubiquinone (yeast)14760.1510.4633Yes
67TIMM10TIMM10
Entrez,  Source
translocase of inner mitochondrial membrane 10 homolog (yeast)14910.1500.4661Yes
68PCCBPCCB
Entrez,  Source
propionyl Coenzyme A carboxylase, beta polypeptide16200.1420.4600Yes
69DLDDLD
Entrez,  Source
dihydrolipoamide dehydrogenase16280.1410.4632Yes
70PECIPECI
Entrez,  Source
peroxisomal D3,D2-enoyl-CoA isomerase16800.1380.4629Yes
71MAOBMAOB
Entrez,  Source
monoamine oxidase B17120.1370.4640Yes
72PLA2G2APLA2G2A
Entrez,  Source
phospholipase A2, group IIA (platelets, synovial fluid)17210.1360.4670Yes
73HADHBHADHB
Entrez,  Source
hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit17470.1340.4685Yes
74SPG7SPG7
Entrez,  Source
spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)17920.1320.4686Yes
75SLC25A21SLC25A21
Entrez,  Source
solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 2118040.1310.4712Yes
76SLC1A2SLC1A2
Entrez,  Source
solute carrier family 1 (glial high affinity glutamate transporter), member 218330.1290.4724Yes
77COX7BCOX7B
Entrez,  Source
cytochrome c oxidase subunit VIIb18490.1290.4746Yes
78GLUD1GLUD1
Entrez,  Source
glutamate dehydrogenase 118640.1280.4769Yes
79UQCRBUQCRB
Entrez,  Source
ubiquinol-cytochrome c reductase binding protein18800.1270.4790Yes
80MRPL12MRPL12
Entrez,  Source
mitochondrial ribosomal protein L1219400.1240.4778Yes
81MIPEPMIPEP
Entrez,  Source
mitochondrial intermediate peptidase19640.1230.4792Yes
82ACADLACADL
Entrez,  Source
acyl-Coenzyme A dehydrogenase, long chain20240.1210.4778Yes
83ENDOGENDOG
Entrez,  Source
endonuclease G20360.1200.4801Yes
84MRPL46MRPL46
Entrez,  Source
mitochondrial ribosomal protein L4620400.1200.4830Yes
85MRPL16MRPL16
Entrez,  Source
mitochondrial ribosomal protein L1621320.1170.4791Yes
86NFS1NFS1
Entrez,  Source
NFS1 nitrogen fixation 1 (S. cerevisiae)21830.1150.4783Yes
87TXNRD2TXNRD2
Entrez,  Source
thioredoxin reductase 222000.1140.4800Yes
88MBMB
Entrez,  Source
myoglobin22190.1140.4816Yes
89IVDIVD
Entrez,  Source
isovaleryl Coenzyme A dehydrogenase22480.1130.4824Yes
90BCS1LBCS1L
Entrez,  Source
BCS1-like (yeast)22720.1110.4835Yes
91ATP5EATP5E
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit23240.1090.4825No
92ATP5OATP5O
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (oligomycin sensitivity conferring protein)24500.1050.4757No
93BCL2BCL2
Entrez,  Source
B-cell CLL/lymphoma 224670.1040.4771No
94TFB1MTFB1M
Entrez,  Source
transcription factor B1, mitochondrial25800.1000.4712No
95TIMM8BTIMM8B
Entrez,  Source
translocase of inner mitochondrial membrane 8 homolog B (yeast)25920.1000.4729No
96POLR1BPOLR1B
Entrez,  Source
polymerase (RNA) I polypeptide B, 128kDa25960.0990.4753No
97ETFAETFA
Entrez,  Source
electron-transfer-flavoprotein, alpha polypeptide (glutaric aciduria II)26500.0980.4738No
98STARSTAR
Entrez,  Source
steroidogenic acute regulator26760.0960.4744No
99DHODHDHODH
Entrez,  Source
dihydroorotate dehydrogenase27520.0940.4711No
100SLC25A5SLC25A5
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 527560.0940.4733No
101GPD2GPD2
Entrez,  Source
glycerol-3-phosphate dehydrogenase 2 (mitochondrial)27710.0930.4746No
102MAOAMAOA
Entrez,  Source
monoamine oxidase A28020.0910.4747No
103SDHASDHA
Entrez,  Source
succinate dehydrogenase complex, subunit A, flavoprotein (Fp)28860.0880.4707No
104NDUFS2NDUFS2
Entrez,  Source
NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)29260.0870.4700No
105PDCD8PDCD8
Entrez,  Source
programmed cell death 8 (apoptosis-inducing factor)30030.0850.4664No
106ATP5G3ATP5G3
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)30380.0840.4659No
107TOMM70ATOMM70A
Entrez,  Source
translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)30620.0830.4663No
108BCKDKBCKDK
Entrez,  Source
branched chain ketoacid dehydrogenase kinase30820.0820.4670No
109SURF1SURF1
Entrez,  Source
surfeit 130980.0820.4680No
110HSPE1HSPE1
Entrez,  Source
heat shock 10kDa protein 1 (chaperonin 10)32270.0780.4602No
111MRPL41MRPL41
Entrez,  Source
mitochondrial ribosomal protein L4133470.0750.4531No
112SNCASNCA
Entrez,  Source
synuclein, alpha (non A4 component of amyloid precursor)34110.0730.4502No
113ARG2ARG2
Entrez,  Source
arginase, type II34490.0720.4492No
114MRPS15MRPS15
Entrez,  Source
mitochondrial ribosomal protein S1534960.0710.4476No
115COX6A2COX6A2
Entrez,  Source
cytochrome c oxidase subunit VIa polypeptide 235170.0710.4479No
116IDH3BIDH3B
Entrez,  Source
isocitrate dehydrogenase 3 (NAD+) beta35450.0700.4476No
117COX7A2COX7A2
Entrez,  Source
cytochrome c oxidase subunit VIIa polypeptide 2 (liver)36470.0680.4417No
118GATMGATM
Entrez,  Source
glycine amidinotransferase (L-arginine:glycine amidinotransferase)36910.0670.4401No
119ATP5JATP5J
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F637090.0660.4406No
120ATP5G2ATP5G2
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)37310.0660.4407No
121MRPS7MRPS7
Entrez,  Source
mitochondrial ribosomal protein S737450.0650.4414No
122RAF1RAF1
Entrez,  Source
v-raf-1 murine leukemia viral oncogene homolog 138470.0630.4353No
123AMTAMT
Entrez,  Source
aminomethyltransferase38750.0630.4349No
124VAV1VAV1
Entrez,  Source
vav 1 oncogene38800.0620.4362No
125ATP5F1ATP5F1
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B138860.0620.4374No
126SDHCSDHC
Entrez,  Source
succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa38980.0620.4382No
127NDUFC2NDUFC2
Entrez,  Source
NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa39090.0620.4390No
128ATP5IATP5I
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E39630.0610.4366No
129PRSS15PRSS15
Entrez,  Source
protease, serine, 1539900.0600.4361No
130BNIP3LBNIP3L
Entrez,  Source
BCL2/adenovirus E1B 19kDa interacting protein 3-like40110.0590.4361No
131UQCRFS1UQCRFS1
Entrez,  Source
ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 140240.0590.4367No
132UCP1UCP1
Entrez,  Source
uncoupling protein 1 (mitochondrial, proton carrier)41330.0560.4300No
133UQCRC2UQCRC2
Entrez,  Source
ubiquinol-cytochrome c reductase core protein II41410.0560.4309No
134MDH2MDH2
Entrez,  Source
malate dehydrogenase 2, NAD (mitochondrial)41680.0560.4303No
135ATP5C1ATP5C1
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 142830.0530.4230No
136ACADMACADM
Entrez,  Source
acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain43100.0530.4224No
137COX5BCOX5B
Entrez,  Source
cytochrome c oxidase subunit Vb43250.0520.4227No
138ACO2ACO2
Entrez,  Source
aconitase 2, mitochondrial43530.0520.4220No
139NDUFS6NDUFS6
Entrez,  Source
NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)43550.0510.4232No
140COX6CCOX6C
Entrez,  Source
cytochrome c oxidase subunit VIc44410.0500.4180No
141MTX2MTX2
Entrez,  Source
metaxin 244560.0490.4182No
142MRPL11MRPL11
Entrez,  Source
mitochondrial ribosomal protein L1144850.0490.4174No
143MRPL44MRPL44
Entrez,  Source
mitochondrial ribosomal protein L4445140.0480.4165No
144DAP3DAP3
Entrez,  Source
death associated protein 345900.0470.4119No
145MPSTMPST
Entrez,  Source
mercaptopyruvate sulfurtransferase47130.0440.4038No
146PDHA1PDHA1
Entrez,  Source
pyruvate dehydrogenase (lipoamide) alpha 147720.0420.4004No
147NR3C1NR3C1
Entrez,  Source
nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)47910.0420.4001No
148ACP6ACP6
Entrez,  Source
acid phosphatase 6, lysophosphatidic48170.0420.3993No
149UQCRC1UQCRC1
Entrez,  Source
ubiquinol-cytochrome c reductase core protein I48610.0410.3971No
150UQCRHUQCRH
Entrez,  Source
ubiquinol-cytochrome c reductase hinge protein49660.0390.3901No
151ATP5DATP5D
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit50130.0380.3876No
152AK3AK3
Entrez,  Source
adenylate kinase 350820.0360.3834No
153CYP27B1CYP27B1
Entrez,  Source
cytochrome P450, family 27, subfamily B, polypeptide 152480.0330.3716No
154MRPL34MRPL34
Entrez,  Source
mitochondrial ribosomal protein L3452520.0330.3722No
155SUCLG1SUCLG1
Entrez,  Source
succinate-CoA ligase, GDP-forming, alpha subunit52600.0330.3725No
156CYCSCYCS
Entrez,  Source
cytochrome c, somatic53200.0320.3689No
157SLC1A3SLC1A3
Entrez,  Source
solute carrier family 1 (glial high affinity glutamate transporter), member 353620.0310.3665No
158COX4I1COX4I1
Entrez,  Source
cytochrome c oxidase subunit IV isoform 153800.0310.3660No
159NDUFS1NDUFS1
Entrez,  Source
NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)53950.0300.3657No
160MRPL19MRPL19
Entrez,  Source
mitochondrial ribosomal protein L1956940.0240.3436No
161CRATCRAT
Entrez,  Source
carnitine acetyltransferase57160.0230.3426No
162MRPL17MRPL17
Entrez,  Source
mitochondrial ribosomal protein L1757200.0230.3430No
163ATP5BATP5B
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide57770.0220.3393No
164COX5ACOX5A
Entrez,  Source
cytochrome c oxidase subunit Va58000.0220.3382No
165SUPV3L1SUPV3L1
Entrez,  Source
suppressor of var1, 3-like 1 (S. cerevisiae)58020.0220.3387No
166PLA2G1BPLA2G1B
Entrez,  Source
phospholipase A2, group IB (pancreas)60570.0170.3197No
167ALDH2ALDH2
Entrez,  Source
aldehyde dehydrogenase 2 family (mitochondrial)62790.0120.3031No
168MRPS18BMRPS18B
Entrez,  Source
mitochondrial ribosomal protein S18B62920.0120.3025No
169MRPL9MRPL9
Entrez,  Source
mitochondrial ribosomal protein L963140.0120.3012No
170CRY1CRY1
Entrez,  Source
cryptochrome 1 (photolyase-like)63560.0100.2984No
171PMPCBPMPCB
Entrez,  Source
peptidase (mitochondrial processing) beta64060.0090.2949No
172IDH3AIDH3A
Entrez,  Source
isocitrate dehydrogenase 3 (NAD+) alpha64330.0090.2931No
173DIABLODIABLO
Entrez,  Source
diablo homolog (Drosophila)64490.0090.2922No
174NDUFS4NDUFS4
Entrez,  Source
NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)64770.0080.2903No
175NDUFA5NDUFA5
Entrez,  Source
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa65530.0070.2848No
176TOMM40TOMM40
Entrez,  Source
translocase of outer mitochondrial membrane 40 homolog (yeast)65980.0060.2816No
177CLN3CLN3
Entrez,  Source
ceroid-lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)66860.0040.2750No
178NDUFB4NDUFB4
Entrez,  Source
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa66900.0040.2749No
179C1QBPC1QBP
Entrez,  Source
complement component 1, q subcomponent binding protein66970.0040.2746No
180MTIF2MTIF2
Entrez,  Source
mitochondrial translational initiation factor 267120.0040.2736No
181GPX4GPX4
Entrez,  Source
glutathione peroxidase 4 (phospholipid hydroperoxidase)67210.0040.2731No
182HSPD1HSPD1
Entrez,  Source
heat shock 60kDa protein 1 (chaperonin)67720.0030.2693No
183ABCB8ABCB8
Entrez,  Source
ATP-binding cassette, sub-family B (MDR/TAP), member 867730.0030.2694No
184MRPL13MRPL13
Entrez,  Source
mitochondrial ribosomal protein L1368220.0020.2658No
185COX6A1COX6A1
Entrez,  Source
cytochrome c oxidase subunit VIa polypeptide 168670.0010.2625No
186IMMTIMMT
Entrez,  Source
inner membrane protein, mitochondrial (mitofilin)68760.0010.2619No
187VDAC3VDAC3
Entrez,  Source
voltage-dependent anion channel 37025-0.0030.2506No
188SSBP1SSBP1
Entrez,  Source
single-stranded DNA binding protein 17057-0.0030.2483No
189TOMM20TOMM20
Entrez,  Source
translocase of outer mitochondrial membrane 20 homolog (yeast)7072-0.0040.2474No
190MRPS18AMRPS18A
Entrez,  Source
mitochondrial ribosomal protein S18A7193-0.0060.2384No
191MFN2MFN2
Entrez,  Source
mitofusin 27196-0.0060.2384No
192GOT2GOT2
Entrez,  Source
glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)7234-0.0070.2357No
193NDUFA8NDUFA8
Entrez,  Source
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa7295-0.0080.2313No
194MRPL2MRPL2
Entrez,  Source
mitochondrial ribosomal protein L27336-0.0090.2285No
195DNM1LDNM1L
Entrez,  Source
dynamin 1-like7354-0.0090.2275No
196MTERFMTERF
Entrez,  Source
mitochondrial transcription termination factor7400-0.0100.2243No
197TIMM44TIMM44
Entrez,  Source
translocase of inner mitochondrial membrane 44 homolog (yeast)7409-0.0100.2239No
198MRPL24MRPL24
Entrez,  Source
mitochondrial ribosomal protein L247475-0.0120.2193No
199CSCS
Entrez,  Source
citrate synthase7513-0.0130.2168No
200ATP5HATP5H
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d7543-0.0130.2149No
201LYPLA2LYPLA2
Entrez,  Source
lysophospholipase II7583-0.0140.2123No
202NME2NME2
Entrez,  Source
non-metastatic cells 2, protein (NM23B) expressed in7595-0.0140.2118No
203CYP11B1CYP11B1
Entrez,  Source
cytochrome P450, family 11, subfamily B, polypeptide 17700-0.0170.2043No
204TFAMTFAM
Entrez,  Source
transcription factor A, mitochondrial7833-0.0190.1947No
205FDXRFDXR
Entrez,  Source
ferredoxin reductase7908-0.0210.1896No
206SLC1A1SLC1A1
Entrez,  Source
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 18024-0.0240.1815No
207TPOTPO
Entrez,  Source
thyroid peroxidase8032-0.0240.1816No
208TIMM13TIMM13
Entrez,  Source
translocase of inner mitochondrial membrane 13 homolog (yeast)8076-0.0250.1789No
209TIMM17ATIMM17A
Entrez,  Source
translocase of inner mitochondrial membrane 17 homolog A (yeast)8212-0.0280.1693No
210BCAT2BCAT2
Entrez,  Source
branched chain aminotransferase 2, mitochondrial8232-0.0280.1686No
211VDAC2VDAC2
Entrez,  Source
voltage-dependent anion channel 28404-0.0320.1564No
212CYBBCYBB
Entrez,  Source
cytochrome b-245, beta polypeptide (chronic granulomatous disease)8513-0.0350.1490No
213BCL2L1BCL2L1
Entrez,  Source
BCL2-like 18585-0.0370.1446No
214PRKCDPRKCD
Entrez,  Source
protein kinase C, delta8690-0.0390.1376No
215CA5BCA5B
Entrez,  Source
carbonic anhydrase VB, mitochondrial8760-0.0400.1334No
216SLC25A11SLC25A11
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 118929-0.0440.1217No
217YWHAEYWHAE
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide8995-0.0460.1179No
218TOMM22TOMM22
Entrez,  Source
translocase of outer mitochondrial membrane 22 homolog (yeast)9085-0.0480.1124No
219UCP3UCP3
Entrez,  Source
uncoupling protein 3 (mitochondrial, proton carrier)9230-0.0520.1027No
220TIMM22TIMM22
Entrez,  Source
translocase of inner mitochondrial membrane 22 homolog (yeast)9516-0.0600.0825No
221RANRAN
Entrez,  Source
RAN, member RAS oncogene family9534-0.0610.0828No
222ANXA7ANXA7
Entrez,  Source
annexin A79552-0.0610.0831No
223YME1L1YME1L1
Entrez,  Source
YME1-like 1 (S. cerevisiae)9701-0.0650.0735No
224CYP20A1CYP20A1
Entrez,  Source
cytochrome P450, family 20, subfamily A, polypeptide 19929-0.0730.0580No
225SLC25A3SLC25A3
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 310075-0.0770.0489No
226BIDBID
Entrez,  Source
BH3 interacting domain death agonist10406-0.0880.0260No
227SLC25A4SLC25A4
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 410578-0.0940.0154No
228BAXBAX
Entrez,  Source
BCL2-associated X protein10699-0.0980.0088No
229MRPL49MRPL49
Entrez,  Source
mitochondrial ribosomal protein L4910732-0.1000.0089No
230ATPIF1ATPIF1
Entrez,  Source
ATPase inhibitory factor 110815-0.1030.0054No
231FDX1FDX1
Entrez,  Source
ferredoxin 110969-0.110-0.0035No
232ATP5SATP5S
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B)11182-0.120-0.0165No
233CDC42BPBCDC42BPB
Entrez,  Source
CDC42 binding protein kinase beta (DMPK-like)11232-0.123-0.0171No
234BIKBIK
Entrez,  Source
BCL2-interacting killer (apoptosis-inducing)11307-0.127-0.0194No
235FIBPFIBP
Entrez,  Source
fibroblast growth factor (acidic) intracellular binding protein11371-0.130-0.0209No
236DUTDUT
Entrez,  Source
dUTP pyrophosphatase11400-0.131-0.0196No
237CASP8CASP8
Entrez,  Source
caspase 8, apoptosis-related cysteine peptidase11401-0.131-0.0162No
238APPAPP
Entrez,  Source
amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer disease)11404-0.131-0.0129No
239DNASE2DNASE2
Entrez,  Source
deoxyribonuclease II, lysosomal11563-0.141-0.0214No
240TP53TP53
Entrez,  Source
tumor protein p53 (Li-Fraumeni syndrome)11690-0.149-0.0271No
241CYP11A1CYP11A1
Entrez,  Source
cytochrome P450, family 11, subfamily A, polypeptide 111705-0.150-0.0243No
242DLATDLAT
Entrez,  Source
dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)11723-0.150-0.0217No
243MTCH1MTCH1
Entrez,  Source
mitochondrial carrier homolog 1 (C. elegans)11859-0.161-0.0278No
244ERBB2ERBB2
Entrez,  Source
v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)12237-0.197-0.0515No
245BAK1BAK1
Entrez,  Source
BCL2-antagonist/killer 112372-0.212-0.0562No
246CA5ACA5A
Entrez,  Source
carbonic anhydrase VA, mitochondrial12440-0.220-0.0556No
247CROTCROT
Entrez,  Source
carnitine O-octanoyltransferase12469-0.223-0.0519No
248APAF1APAF1
Entrez,  Source
apoptotic peptidase activating factor12510-0.230-0.0490No
249POPDC2POPDC2
Entrez,  Source
popeye domain containing 212600-0.245-0.0494No
250HK1HK1
Entrez,  Source
hexokinase 112636-0.251-0.0456No
251COX15COX15
Entrez,  Source
COX15 homolog, cytochrome c oxidase assembly protein (yeast)12707-0.266-0.0440No
252PYGBPYGB
Entrez,  Source
phosphorylase, glycogen; brain12849-0.302-0.0469No
253CYBACYBA
Entrez,  Source
cytochrome b-245, alpha polypeptide12989-0.359-0.0482No
254MAP3K1MAP3K1
Entrez,  Source
mitogen-activated protein kinase kinase kinase 113003-0.366-0.0397No
255NGFRAP1NGFRAP1
Entrez,  Source
nerve growth factor receptor (TNFRSF16) associated protein 113127-0.447-0.0375No
256CASP2CASP2
Entrez,  Source
caspase 2, apoptosis-related cysteine peptidase (neural precursor cell expressed, developmentally down-regulated 2)13202-0.565-0.0284No
257LGALS3LGALS3
Entrez,  Source
lectin, galactoside-binding, soluble, 3 (galectin 3)13253-0.689-0.0143No
258UCP2UCP2
Entrez,  Source
uncoupling protein 2 (mitochondrial, proton carrier)13284-0.8080.0044No
Table: GSEA details [plain text format]



Fig 2: MITOCHONDRIA   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: MITOCHONDRIA: Random ES distribution   
Gene set null distribution of ES for MITOCHONDRIA