Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | PATTERN_BINDING |
| Enrichment Score (ES) | 0.6807319 |
| Normalized Enrichment Score (NES) | 1.8460959 |
| Nominal p-value | 0.0021459227 |
| FDR q-value | 0.008880553 |
| FWER p-Value | 0.725 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | PGLYRP1 | PGLYRP1 Entrez, Source | peptidoglycan recognition protein 1 | 22 | 0.887 | 0.2186 | Yes |
| 2 | TNFAIP6 | TNFAIP6 Entrez, Source | tumor necrosis factor, alpha-induced protein 6 | 64 | 0.710 | 0.3917 | Yes |
| 3 | LPL | LPL Entrez, Source | lipoprotein lipase | 230 | 0.451 | 0.4913 | Yes |
| 4 | SERPINA5 | SERPINA5 Entrez, Source | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 | 474 | 0.311 | 0.5503 | Yes |
| 5 | CD14 | CD14 Entrez, Source | CD14 molecule | 612 | 0.262 | 0.6051 | Yes |
| 6 | APOA5 | APOA5 Entrez, Source | apolipoprotein A-V | 827 | 0.217 | 0.6428 | Yes |
| 7 | FGFBP1 | FGFBP1 Entrez, Source | fibroblast growth factor binding protein 1 | 975 | 0.197 | 0.6807 | Yes |
| 8 | TGFBR3 | TGFBR3 Entrez, Source | transforming growth factor, beta receptor III (betaglycan, 300kDa) | 2590 | 0.100 | 0.5843 | No |
| 9 | FGF10 | FGF10 Entrez, Source | fibroblast growth factor 10 | 2836 | 0.090 | 0.5882 | No |
| 10 | THBS4 | THBS4 Entrez, Source | thrombospondin 4 | 5218 | 0.034 | 0.4178 | No |
| 11 | IMPG2 | IMPG2 Entrez, Source | interphotoreceptor matrix proteoglycan 2 | 5572 | 0.026 | 0.3978 | No |
| 12 | TLR2 | TLR2 Entrez, Source | toll-like receptor 2 | 5730 | 0.023 | 0.3918 | No |
| 13 | PF4 | PF4 Entrez, Source | platelet factor 4 (chemokine (C-X-C motif) ligand 4) | 6018 | 0.018 | 0.3747 | No |
| 14 | THBS2 | THBS2 Entrez, Source | thrombospondin 2 | 6077 | 0.017 | 0.3745 | No |
| 15 | CHIA | CHIA Entrez, Source | chitinase, acidic | 6796 | 0.002 | 0.3212 | No |
| 16 | RPL29 | RPL29 Entrez, Source | ribosomal protein L29 | 8680 | -0.039 | 0.1894 | No |
| 17 | STAB2 | STAB2 Entrez, Source | stabilin 2 | 8713 | -0.039 | 0.1967 | No |
| 18 | MDK | MDK Entrez, Source | midkine (neurite growth-promoting factor 2) | 9992 | -0.074 | 0.1192 | No |
| 19 | LRPAP1 | LRPAP1 Entrez, Source | low density lipoprotein receptor-related protein associated protein 1 | 9995 | -0.074 | 0.1375 | No |
| 20 | FSTL1 | FSTL1 Entrez, Source | follistatin-like 1 | 10104 | -0.078 | 0.1489 | No |
| 21 | HDGF | HDGF Entrez, Source | hepatoma-derived growth factor (high-mobility group protein 1-like) | 10997 | -0.112 | 0.1096 | No |
| 22 | HBEGF | HBEGF Entrez, Source | heparin-binding EGF-like growth factor | 12714 | -0.267 | 0.0471 | No |
