Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | PHOSPHOLIPID_BIOSYNTHETIC_PROCESS |
| Enrichment Score (ES) | 0.6915561 |
| Normalized Enrichment Score (NES) | 1.7563659 |
| Nominal p-value | 0.019148936 |
| FDR q-value | 0.020283557 |
| FWER p-Value | 0.972 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | PEMT | PEMT Entrez, Source | phosphatidylethanolamine N-methyltransferase | 26 | 0.861 | 0.2418 | Yes |
| 2 | LCAT | LCAT Entrez, Source | lecithin-cholesterol acyltransferase | 76 | 0.677 | 0.4301 | Yes |
| 3 | CHPT1 | CHPT1 Entrez, Source | choline phosphotransferase 1 | 302 | 0.396 | 0.5254 | Yes |
| 4 | FADS1 | FADS1 Entrez, Source | fatty acid desaturase 1 | 401 | 0.338 | 0.6137 | Yes |
| 5 | PCYT2 | PCYT2 Entrez, Source | phosphate cytidylyltransferase 2, ethanolamine | 625 | 0.260 | 0.6706 | Yes |
| 6 | APOA1 | APOA1 Entrez, Source | apolipoprotein A-I | 1052 | 0.187 | 0.6916 | Yes |
| 7 | PIGC | PIGC Entrez, Source | phosphatidylinositol glycan anchor biosynthesis, class C | 3012 | 0.084 | 0.5685 | No |
| 8 | PIGK | PIGK Entrez, Source | phosphatidylinositol glycan anchor biosynthesis, class K | 3142 | 0.080 | 0.5816 | No |
| 9 | PI4K2A | 3350 | 0.075 | 0.5872 | No | ||
| 10 | PIGS | PIGS Entrez, Source | phosphatidylinositol glycan anchor biosynthesis, class S | 7220 | -0.007 | 0.2988 | No |
| 11 | DPM2 | DPM2 Entrez, Source | dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit | 8278 | -0.029 | 0.2277 | No |
| 12 | IMPA1 | IMPA1 Entrez, Source | inositol(myo)-1(or 4)-monophosphatase 1 | 9105 | -0.049 | 0.1796 | No |
| 13 | AGPAT1 | AGPAT1 Entrez, Source | 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) | 10638 | -0.097 | 0.0920 | No |
| 14 | CD81 | CD81 Entrez, Source | CD81 molecule | 10933 | -0.108 | 0.1006 | No |
| 15 | PCYT1B | PCYT1B Entrez, Source | phosphate cytidylyltransferase 1, choline, beta | 11101 | -0.117 | 0.1211 | No |
| 16 | PIGV | PIGV Entrez, Source | phosphatidylinositol glycan anchor biosynthesis, class V | 11904 | -0.166 | 0.1079 | No |
