Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos |
| Phenotype | class.cls#double_gel_8d_versus_single_gel_8d_repos |
| Upregulated in class | single_gel_8d |
| GeneSet | RUFFLE |
| Enrichment Score (ES) | -0.6583836 |
| Normalized Enrichment Score (NES) | -1.687476 |
| Nominal p-value | 0.017475728 |
| FDR q-value | 0.07908601 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | PDPN | PDPN Entrez, Source | podoplanin | 1169 | 0.174 | -0.0029 | No |
| 2 | CDK6 | CDK6 Entrez, Source | cyclin-dependent kinase 6 | 2067 | 0.119 | -0.0124 | No |
| 3 | ARF6 | ARF6 Entrez, Source | ADP-ribosylation factor 6 | 6561 | 0.007 | -0.3463 | No |
| 4 | FGD4 | FGD4 Entrez, Source | FYVE, RhoGEF and PH domain containing 4 | 6928 | -0.000 | -0.3736 | No |
| 5 | PIB5PA | PIB5PA Entrez, Source | phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A | 7047 | -0.003 | -0.3810 | No |
| 6 | ALS2 | ALS2 Entrez, Source | amyotrophic lateral sclerosis 2 (juvenile) | 7100 | -0.004 | -0.3829 | No |
| 7 | ARFIP2 | ARFIP2 Entrez, Source | ADP-ribosylation factor interacting protein 2 (arfaptin 2) | 7224 | -0.007 | -0.3889 | No |
| 8 | NME2 | NME2 Entrez, Source | non-metastatic cells 2, protein (NM23B) expressed in | 7595 | -0.014 | -0.4096 | No |
| 9 | CTTN | CTTN Entrez, Source | cortactin | 10911 | -0.107 | -0.6061 | Yes |
| 10 | BCAR1 | BCAR1 Entrez, Source | breast cancer anti-estrogen resistance 1 | 11123 | -0.118 | -0.5643 | Yes |
| 11 | TLN1 | TLN1 Entrez, Source | talin 1 | 11127 | -0.118 | -0.5069 | Yes |
| 12 | MYO5A | MYO5A Entrez, Source | myosin VA (heavy chain 12, myoxin) | 11192 | -0.121 | -0.4528 | Yes |
| 13 | ITGB1 | ITGB1 Entrez, Source | integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) | 11366 | -0.129 | -0.4027 | Yes |
| 14 | S100B | S100B Entrez, Source | S100 calcium binding protein B | 11736 | -0.151 | -0.3567 | Yes |
| 15 | FGD1 | FGD1 Entrez, Source | FYVE, RhoGEF and PH domain containing 1 (faciogenital dysplasia) | 12106 | -0.182 | -0.2957 | Yes |
| 16 | MYH9 | MYH9 Entrez, Source | myosin, heavy chain 9, non-muscle | 12585 | -0.241 | -0.2140 | Yes |
| 17 | S100A11 | S100A11 Entrez, Source | S100 calcium binding protein A11 | 12634 | -0.251 | -0.0954 | Yes |
| 18 | S100A6 | S100A6 Entrez, Source | S100 calcium binding protein A6 | 12854 | -0.305 | 0.0366 | Yes |
