Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_single_gel_8d.class.cls
#double_gel_8d_versus_single_gel_8d_repos
Phenotypeclass.cls#double_gel_8d_versus_single_gel_8d_repos
Upregulated in classsingle_gel_8d
GeneSetTTCYRGAA_UNKNOWN
Enrichment Score (ES)-0.46836916
Normalized Enrichment Score (NES)-1.7992496
Nominal p-value0.0
FDR q-value0.04816173
FWER p-Value0.916
Table: GSEA Results Summary



Fig 1: Enrichment plot: TTCYRGAA_UNKNOWN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SOD2SOD2
Entrez,  Source
superoxide dismutase 2, mitochondrial3910.343-0.0118No
2EGR2EGR2
Entrez,  Source
early growth response 2 (Krox-20 homolog, Drosophila)4020.3380.0051No
3SPA17SPA17
Entrez,  Source
sperm autoantigenic protein 1711450.177-0.0419No
4IDH1IDH1
Entrez,  Source
isocitrate dehydrogenase 1 (NADP+), soluble11830.172-0.0358No
5TAS2R5TAS2R5
Entrez,  Source
taste receptor, type 2, member 512240.169-0.0300No
6PTDSRPTDSR
Entrez,  Source
phosphatidylserine receptor12550.167-0.0235No
7CEPT1CEPT1
Entrez,  Source
choline/ethanolamine phosphotransferase 112570.167-0.0149No
8PGM1PGM1
Entrez,  Source
phosphoglucomutase 113440.161-0.0130No
9SELPSELP
Entrez,  Source
selectin P (granule membrane protein 140kDa, antigen CD62)14080.156-0.0096No
10PON2PON2
Entrez,  Source
paraoxonase 215310.147-0.0112No
11LGALS8LGALS8
Entrez,  Source
lectin, galactoside-binding, soluble, 8 (galectin 8)18160.130-0.0259No
12STAT4STAT4
Entrez,  Source
signal transducer and activator of transcription 419450.124-0.0292No
13GPC4GPC4
Entrez,  Source
glypican 421330.117-0.0372No
14ADRBK1ADRBK1
Entrez,  Source
adrenergic, beta, receptor kinase 122930.111-0.0435No
15PDE4CPDE4C
Entrez,  Source
phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila)22980.110-0.0381No
16DNMT3BDNMT3B
Entrez,  Source
DNA (cytosine-5-)-methyltransferase 3 beta23990.107-0.0401No
17IL2IL2
Entrez,  Source
interleukin 225050.102-0.0427No
18SERPINA10SERPINA10
Entrez,  Source
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1026290.098-0.0469No
19WBP2WBP2
Entrez,  Source
WW domain binding protein 227280.095-0.0494No
20PCDH8PCDH8
Entrez,  Source
protocadherin 828690.089-0.0554No
21SEMA3ASEMA3A
Entrez,  Source
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A30920.082-0.0680No
22RAB24RAB24
Entrez,  Source
RAB24, member RAS oncogene family31370.080-0.0671No
23HSPE1HSPE1
Entrez,  Source
heat shock 10kDa protein 1 (chaperonin 10)32270.078-0.0698No
24CAMK2BCAMK2B
Entrez,  Source
calcium/calmodulin-dependent protein kinase (CaM kinase) II beta33510.075-0.0752No
25MAP1LC3BMAP1LC3B
Entrez,  Source
microtubule-associated protein 1 light chain 3 beta33800.074-0.0735No
26APLP2APLP2
Entrez,  Source
amyloid beta (A4) precursor-like protein 233890.074-0.0702No
27TNMDTNMD
Entrez,  Source
tenomodulin34220.073-0.0688No
28FLNCFLNC
Entrez,  Source
filamin C, gamma (actin binding protein 280)35770.069-0.0769No
29KLHL10KLHL10
Entrez,  Source
kelch-like 10 (Drosophila)36020.069-0.0751No
30IL22RA2IL22RA2
Entrez,  Source
interleukin 22 receptor, alpha 236120.068-0.0722No
31PIK3R1PIK3R1
Entrez,  Source
phosphoinositide-3-kinase, regulatory subunit 1 (p85 alpha)38760.062-0.0889No
32ATP5IATP5I
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E39630.061-0.0923No
33HSPB2HSPB2
Entrez,  Source
heat shock 27kDa protein 239660.060-0.0893No
34MYOD1MYOD1
Entrez,  Source
myogenic differentiation 142240.054-0.1059No
35MEPEMEPE
Entrez,  Source
matrix, extracellular phosphoglycoprotein with ASARM motif (bone)43220.052-0.1106No
36SCGB1A1SCGB1A1
Entrez,  Source
secretoglobin, family 1A, member 1 (uteroglobin)43730.051-0.1117No
37KCNQ1KCNQ1
Entrez,  Source
potassium voltage-gated channel, KQT-like subfamily, member 145810.047-0.1249No
38MAPTMAPT
Entrez,  Source
microtubule-associated protein tau48120.042-0.1402No
39GABRB3GABRB3
Entrez,  Source
gamma-aminobutyric acid (GABA) A receptor, beta 349000.040-0.1447No
40CACNA1ICACNA1I
Entrez,  Source
calcium channel, voltage-dependent, alpha 1I subunit49100.040-0.1433No
41ACRV1ACRV1
Entrez,  Source
acrosomal vesicle protein 150490.037-0.1519No
42GAS7GAS7
Entrez,  Source
growth arrest-specific 750730.036-0.1517No
43LRRC17LRRC17
Entrez,  Source
leucine rich repeat containing 1751080.036-0.1524No
44UBE2BUBE2B
Entrez,  Source
ubiquitin-conjugating enzyme E2B (RAD6 homolog)52740.032-0.1632No
45PPP2R5BPPP2R5B
Entrez,  Source
protein phosphatase 2, regulatory subunit B (B56), beta isoform52920.032-0.1629No
46PTHLHPTHLH
Entrez,  Source
parathyroid hormone-like hormone54280.029-0.1716No
47GTF3C2GTF3C2
Entrez,  Source
general transcription factor IIIC, polypeptide 2, beta 110kDa54810.028-0.1740No
48TWIST2TWIST2
Entrez,  Source
twist homolog 2 (Drosophila)55440.027-0.1773No
49GLRA2GLRA2
Entrez,  Source
glycine receptor, alpha 256580.024-0.1846No
50FRAG1FRAG1
Entrez,  Source
-58370.021-0.1970No
51ARHGEF12ARHGEF12
Entrez,  Source
Rho guanine nucleotide exchange factor (GEF) 1259360.020-0.2034No
52LGI1LGI1
Entrez,  Source
leucine-rich, glioma inactivated 159820.019-0.2059No
53GAB2GAB2
Entrez,  Source
GRB2-associated binding protein 260130.018-0.2072No
54TXNDC9TXNDC9
Entrez,  Source
thioredoxin domain containing 960960.016-0.2126No
55SYNCRIPSYNCRIP
Entrez,  Source
synaptotagmin binding, cytoplasmic RNA interacting protein61460.015-0.2155No
56SLC25A27SLC25A27
Entrez,  Source
solute carrier family 25, member 2761770.015-0.2170No
57FGF16FGF16
Entrez,  Source
fibroblast growth factor 1662070.014-0.2184No
58SIX3SIX3
Entrez,  Source
sine oculis homeobox homolog 3 (Drosophila)62200.014-0.2186No
59GRIN2DGRIN2D
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate 2D62620.013-0.2211No
60MGAT3MGAT3
Entrez,  Source
mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase63600.010-0.2279No
61ADRA2CADRA2C
Entrez,  Source
adrenergic, alpha-2C-, receptor63960.010-0.2300No
62RIMS2RIMS2
Entrez,  Source
regulating synaptic membrane exocytosis 265440.007-0.2408No
63LTC4SLTC4S
Entrez,  Source
leukotriene C4 synthase65660.007-0.2421No
64HSPD1HSPD1
Entrez,  Source
heat shock 60kDa protein 1 (chaperonin)67720.003-0.2575No
65PRDX6PRDX6
Entrez,  Source
peroxiredoxin 668500.001-0.2632No
66GABRB1GABRB1
Entrez,  Source
gamma-aminobutyric acid (GABA) A receptor, beta 168640.001-0.2642No
67TOP1TOP1
Entrez,  Source
topoisomerase (DNA) I68690.001-0.2644No
68CXXC4CXXC4
Entrez,  Source
CXXC finger 46999-0.002-0.2741No
69GJB6GJB6
Entrez,  Source
gap junction protein, beta 6 (connexin 30)7028-0.003-0.2761No
70WASLWASL
Entrez,  Source
Wiskott-Aldrich syndrome-like7397-0.010-0.3034No
71KCNH2KCNH2
Entrez,  Source
potassium voltage-gated channel, subfamily H (eag-related), member 27491-0.012-0.3099No
72VPS52VPS52
Entrez,  Source
vacuolar protein sorting 52 (S. cerevisiae)7507-0.013-0.3103No
73RPS18RPS18
Entrez,  Source
ribosomal protein S187553-0.014-0.3130No
74NTF5NTF5
Entrez,  Source
neurotrophin 5 (neurotrophin 4/5)7611-0.015-0.3166No
75MEGF10MEGF10
Entrez,  Source
multiple EGF-like-domains 107779-0.018-0.3283No
76CDH22CDH22
Entrez,  Source
cadherin-like 228169-0.027-0.3564No
77KCNAB1KCNAB1
Entrez,  Source
potassium voltage-gated channel, shaker-related subfamily, beta member 18172-0.027-0.3552No
78ABCA3ABCA3
Entrez,  Source
ATP-binding cassette, sub-family A (ABC1), member 38214-0.028-0.3568No
79NUP98NUP98
Entrez,  Source
nucleoporin 98kDa8376-0.032-0.3674No
80SPINSPIN
Entrez,  Source
spindlin8397-0.032-0.3672No
81PER2PER2
Entrez,  Source
period homolog 2 (Drosophila)8421-0.033-0.3672No
82ESR1ESR1
Entrez,  Source
estrogen receptor 18446-0.033-0.3673No
83ATP2C1ATP2C1
Entrez,  Source
ATPase, Ca++ transporting, type 2C, member 18499-0.034-0.3694No
84ST13ST13
Entrez,  Source
suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)8530-0.035-0.3699No
85COG7COG7
Entrez,  Source
component of oligomeric golgi complex 78620-0.037-0.3747No
86PPP1R7PPP1R7
Entrez,  Source
protein phosphatase 1, regulatory subunit 79184-0.051-0.4147No
87CYR61CYR61
Entrez,  Source
cysteine-rich, angiogenic inducer, 619477-0.059-0.4338No
88AGTR2AGTR2
Entrez,  Source
angiotensin II receptor, type 29505-0.060-0.4327No
89TGIFTGIF
Entrez,  Source
TGFB-induced factor (TALE family homeobox)9563-0.061-0.4338No
90EIF5BEIF5B
Entrez,  Source
eukaryotic translation initiation factor 5B9668-0.064-0.4383No
91SFRS10SFRS10
Entrez,  Source
splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila)9695-0.065-0.4369No
92PPM2CPPM2C
Entrez,  Source
protein phosphatase 2C, magnesium-dependent, catalytic subunit9971-0.074-0.4539No
93SAGSAG
Entrez,  Source
S-antigen; retina and pineal gland (arrestin)9972-0.074-0.4501No
94NPY2RNPY2R
Entrez,  Source
neuropeptide Y receptor Y210141-0.079-0.4587No
95CDIPTCDIPT
Entrez,  Source
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)10202-0.081-0.4590No
96HSPA8HSPA8
Entrez,  Source
heat shock 70kDa protein 810327-0.086-0.4639Yes
97VCPVCP
Entrez,  Source
valosin-containing protein10359-0.087-0.4617Yes
98RECQLRECQL
Entrez,  Source
RecQ protein-like (DNA helicase Q1-like)10390-0.088-0.4594Yes
99MORF4L2MORF4L2
Entrez,  Source
mortality factor 4 like 210413-0.089-0.4564Yes
100MTA2MTA2
Entrez,  Source
metastasis associated 1 family, member 210450-0.090-0.4545Yes
101NPR1NPR1
Entrez,  Source
natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)10478-0.091-0.4518Yes
102CCT4CCT4
Entrez,  Source
chaperonin containing TCP1, subunit 4 (delta)10483-0.091-0.4474Yes
103SCN3ASCN3A
Entrez,  Source
sodium channel, voltage-gated, type III, alpha10506-0.091-0.4442Yes
104EWSR1EWSR1
Entrez,  Source
Ewing sarcoma breakpoint region 110512-0.092-0.4398Yes
105BRD2BRD2
Entrez,  Source
bromodomain containing 210513-0.092-0.4350Yes
106DNAJA1DNAJA1
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily A, member 110557-0.094-0.4334Yes
107YWHAGYWHAG
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide10619-0.096-0.4330Yes
108PASKPASK
Entrez,  Source
PAS domain containing serine/threonine kinase10632-0.096-0.4289Yes
109ADAMTS1ADAMTS1
Entrez,  Source
ADAM metallopeptidase with thrombospondin type 1 motif, 110664-0.097-0.4262Yes
110PAFAH1B2PAFAH1B2
Entrez,  Source
platelet-activating factor acetylhydrolase, isoform Ib, beta subunit 30kDa10691-0.098-0.4230Yes
111PIK3R2PIK3R2
Entrez,  Source
phosphoinositide-3-kinase, regulatory subunit 2 (p85 beta)10731-0.100-0.4208Yes
112MTPNMTPN
Entrez,  Source
myotrophin10904-0.107-0.4283Yes
113NUP153NUP153
Entrez,  Source
nucleoporin 153kDa11280-0.126-0.4501Yes
114STAMBPSTAMBP
Entrez,  Source
STAM binding protein11308-0.127-0.4456Yes
115PPIDPPID
Entrez,  Source
peptidylprolyl isomerase D (cyclophilin D)11332-0.128-0.4406Yes
116GPATC2GPATC2
Entrez,  Source
G patch domain containing 211333-0.128-0.4340Yes
117AP3D1AP3D1
Entrez,  Source
adaptor-related protein complex 3, delta 1 subunit11360-0.129-0.4292Yes
118STIP1STIP1
Entrez,  Source
stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein)11377-0.130-0.4236Yes
119RAB2BRAB2B
Entrez,  Source
RAB2B, member RAS oncogene family11421-0.132-0.4200Yes
120NUDCNUDC
Entrez,  Source
nuclear distribution gene C homolog (A. nidulans)11586-0.143-0.4250Yes
121GPX1GPX1
Entrez,  Source
glutathione peroxidase 111620-0.145-0.4199Yes
122GABRA1GABRA1
Entrez,  Source
gamma-aminobutyric acid (GABA) A receptor, alpha 111632-0.146-0.4131Yes
123E2F1E2F1
Entrez,  Source
E2F transcription factor 111673-0.148-0.4084Yes
124IER5IER5
Entrez,  Source
immediate early response 511685-0.149-0.4015Yes
125SLC4A2SLC4A2
Entrez,  Source
solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)11703-0.150-0.3950Yes
126XPO1XPO1
Entrez,  Source
exportin 1 (CRM1 homolog, yeast)11725-0.151-0.3887Yes
127PLSCR4PLSCR4
Entrez,  Source
phospholipid scramblase 411764-0.153-0.3836Yes
128CLUCLU
Entrez,  Source
clusterin11779-0.155-0.3766Yes
129CBX3CBX3
Entrez,  Source
chromobox homolog 3 (HP1 gamma homolog, Drosophila)11802-0.156-0.3701Yes
130FBXO30FBXO30
Entrez,  Source
F-box protein 3011851-0.160-0.3653Yes
131HSPH1HSPH1
Entrez,  Source
heat shock 105kDa/110kDa protein 111957-0.169-0.3645Yes
132DNAJB4DNAJB4
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily B, member 411966-0.170-0.3562Yes
133GLULD1GLULD1
Entrez,  Source
glutamate-ammonia ligase (glutamine synthetase) domain containing 111986-0.172-0.3487Yes
134ACVR1ACVR1
Entrez,  Source
activin A receptor, type I11998-0.173-0.3405Yes
135CDK5CDK5
Entrez,  Source
cyclin-dependent kinase 512107-0.182-0.3392Yes
136TPP2TPP2
Entrez,  Source
tripeptidyl peptidase II12117-0.183-0.3303Yes
137YWHAQYWHAQ
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide12130-0.184-0.3216Yes
138CDKN1ACDKN1A
Entrez,  Source
cyclin-dependent kinase inhibitor 1A (p21, Cip1)12163-0.188-0.3143Yes
139HAT1HAT1
Entrez,  Source
histone acetyltransferase 112419-0.217-0.3223Yes
140EP300EP300
Entrez,  Source
E1A binding protein p30012496-0.228-0.3161Yes
141CAP1CAP1
Entrez,  Source
CAP, adenylate cyclase-associated protein 1 (yeast)12522-0.231-0.3059Yes
142PROM1PROM1
Entrez,  Source
prominin 112722-0.269-0.3069Yes
143CRYABCRYAB
Entrez,  Source
crystallin, alpha B12728-0.271-0.2932Yes
144HSPB1HSPB1
Entrez,  Source
heat shock 27kDa protein 112892-0.318-0.2890Yes
145KRT20KRT20
Entrez,  Source
keratin 2013006-0.369-0.2783Yes
146PLATPLAT
Entrez,  Source
plasminogen activator, tissue13010-0.371-0.2591Yes
147UCHL1UCHL1
Entrez,  Source
ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)13032-0.382-0.2408Yes
148NNATNNAT
Entrez,  Source
neuronatin13037-0.385-0.2210Yes
149NPPBNPPB
Entrez,  Source
natriuretic peptide precursor B13138-0.457-0.2047Yes
150RTN1RTN1
Entrez,  Source
reticulon 113181-0.527-0.1803Yes
151SERPINH1SERPINH1
Entrez,  Source
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)13222-0.606-0.1518Yes
152MAT2AMAT2A
Entrez,  Source
methionine adenosyltransferase II, alpha13252-0.684-0.1183Yes
153JAG1JAG1
Entrez,  Source
jagged 1 (Alagille syndrome)13287-0.812-0.0784Yes
154ACTA1ACTA1
Entrez,  Source
actin, alpha 1, skeletal muscle13340-1.5810.0002Yes
Table: GSEA details [plain text format]



Fig 2: TTCYRGAA_UNKNOWN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: TTCYRGAA_UNKNOWN: Random ES distribution   
Gene set null distribution of ES for TTCYRGAA_UNKNOWN