Details for gene set V$HNF4_DR1

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_single_gel_8d.class.cls #double_gel_8d_versus_single_gel_8d_repos
Phenotype	class.cls#double_gel_8d_versus_single_gel_8d_repos
Upregulated in class	double_gel_8d
GeneSet	V$HNF4_DR1_Q3
Enrichment Score (ES)	0.42728573
Normalized Enrichment Score (NES)	1.6043892
Nominal p-value	0.0
FDR q-value	0.06736901
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	FABP1	FABP1 Entrez, Source	fatty acid binding protein 1, liver	8	1.205	0.0670	Yes
2	OTC	OTC Entrez, Source	ornithine carbamoyltransferase	49	0.765	0.1070	Yes
3	LCAT	LCAT Entrez, Source	lecithin-cholesterol acyltransferase	76	0.677	0.1430	Yes
4	PFKFB1	PFKFB1 Entrez, Source	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1	95	0.621	0.1765	Yes
5	GUCY2C	GUCY2C Entrez, Source	guanylate cyclase 2C (heat stable enterotoxin receptor)	115	0.593	0.2084	Yes
6	F10	F10 Entrez, Source	coagulation factor X	141	0.550	0.2373	Yes
7	GRK5	GRK5 Entrez, Source	G protein-coupled receptor kinase 5	176	0.496	0.2626	Yes
8	PKLR	PKLR Entrez, Source	pyruvate kinase, liver and RBC	184	0.487	0.2894	Yes
9	ITGA1	ITGA1 Entrez, Source	integrin, alpha 1	278	0.416	0.3058	Yes
10	POLD4	POLD4 Entrez, Source	polymerase (DNA-directed), delta 4	294	0.400	0.3271	Yes
11	MASP2	MASP2 Entrez, Source	mannan-binding lectin serine peptidase 2	308	0.392	0.3481	Yes
12	PRODH2	PRODH2 Entrez, Source	proline dehydrogenase (oxidase) 2	365	0.356	0.3639	Yes
13	FKBP5	FKBP5 Entrez, Source	FK506 binding protein 5	405	0.337	0.3798	Yes
14	FOXA3	FOXA3 Entrez, Source	forkhead box A3	492	0.303	0.3903	Yes
15	NR1H3	NR1H3 Entrez, Source	nuclear receptor subfamily 1, group H, member 3	540	0.287	0.4029	Yes
16	ERBB3	ERBB3 Entrez, Source	v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	595	0.269	0.4139	Yes
17	FXYD1	FXYD1 Entrez, Source	FXYD domain containing ion transport regulator 1 (phospholemman)	789	0.221	0.4117	Yes
18	PEX16	PEX16 Entrez, Source	peroxisomal biogenesis factor 16	908	0.206	0.4143	Yes
19	F12	F12 Entrez, Source	coagulation factor XII (Hageman factor)	970	0.198	0.4208	Yes
20	GALK1	GALK1 Entrez, Source	galactokinase 1	1032	0.189	0.4268	Yes
21	HIBADH	HIBADH Entrez, Source	3-hydroxyisobutyrate dehydrogenase	1157	0.175	0.4273	Yes
22	CSF2	CSF2 Entrez, Source	colony stimulating factor 2 (granulocyte-macrophage)	1548	0.146	0.4060	No
23	SCN1A	SCN1A Entrez, Source	sodium channel, voltage-gated, type I, alpha	1591	0.143	0.4109	No
24	KCNK10	KCNK10 Entrez, Source	potassium channel, subfamily K, member 10	1613	0.142	0.4173	No
25	IHPK2	IHPK2 Entrez, Source	inositol hexaphosphate kinase 2	1698	0.137	0.4186	No
26	PPARGC1A	PPARGC1A Entrez, Source	peroxisome proliferative activated receptor, gamma, coactivator 1, alpha	1770	0.133	0.4207	No
27	GDNF	GDNF Entrez, Source	glial cell derived neurotrophic factor	1808	0.131	0.4252	No
28	SHMT1	SHMT1 Entrez, Source	serine hydroxymethyltransferase 1 (soluble)	1892	0.127	0.4260	No
29	LMO3	LMO3 Entrez, Source	LIM domain only 3 (rhombotin-like 2)	1995	0.122	0.4252	No
30	DMD	DMD Entrez, Source	dystrophin (muscular dystrophy, Duchenne and Becker types)	2146	0.116	0.4204	No
31	ZPBP2	ZPBP2 Entrez, Source	zona pellucida binding protein 2	2397	0.107	0.4074	No
32	USP52	USP52 Entrez, Source	ubiquitin specific peptidase 52	2621	0.098	0.3961	No
33	CNTFR	CNTFR Entrez, Source	ciliary neurotrophic factor receptor	2718	0.095	0.3942	No
34	HAGH	HAGH Entrez, Source	hydroxyacylglutathione hydrolase	2738	0.094	0.3980	No
35	INSR	INSR Entrez, Source	insulin receptor	2897	0.088	0.3910	No
36	MSX1	MSX1 Entrez, Source	msh homeobox homolog 1 (Drosophila)	3040	0.084	0.3850	No
37	TOMM70A	TOMM70A Entrez, Source	translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)	3062	0.083	0.3881	No
38	EIF4EBP2	EIF4EBP2 Entrez, Source	eukaryotic translation initiation factor 4E binding protein 2	3074	0.083	0.3919	No
39	HSPE1	HSPE1 Entrez, Source	heat shock 10kDa protein 1 (chaperonin 10)	3227	0.078	0.3847	No
40	DAB2IP	DAB2IP Entrez, Source	DAB2 interacting protein	3243	0.077	0.3879	No
41	HSD17B8	HSD17B8 Entrez, Source	hydroxysteroid (17-beta) dehydrogenase 8	3280	0.077	0.3895	No
42	USH1C	USH1C Entrez, Source	Usher syndrome 1C (autosomal recessive, severe)	3303	0.076	0.3921	No
43	PDZK1	PDZK1 Entrez, Source	PDZ domain containing 1	3333	0.075	0.3941	No
44	SNAI1	SNAI1 Entrez, Source	snail homolog 1 (Drosophila)	3621	0.068	0.3763	No
45	SMOC1	SMOC1 Entrez, Source	SPARC related modular calcium binding 1	3671	0.067	0.3763	No
46	ZBTB12	ZBTB12 Entrez, Source	zinc finger and BTB domain containing 12	4229	0.054	0.3373	No
47	SENP2	SENP2 Entrez, Source	SUMO1/sentrin/SMT3 specific peptidase 2	4299	0.053	0.3350	No
48	MRPL11	MRPL11 Entrez, Source	mitochondrial ribosomal protein L11	4485	0.049	0.3237	No
49	TTR	TTR Entrez, Source	transthyretin (prealbumin, amyloidosis type I)	4587	0.047	0.3187	No
50	KLK6	KLK6 Entrez, Source	kallikrein 6 (neurosin, zyme)	4638	0.046	0.3175	No
51	SLC34A1	SLC34A1 Entrez, Source	solute carrier family 34 (sodium phosphate), member 1	4690	0.044	0.3161	No
52	SCAMP3	SCAMP3 Entrez, Source	secretory carrier membrane protein 3	5103	0.036	0.2870	No
53	NR2F6	NR2F6 Entrez, Source	nuclear receptor subfamily 2, group F, member 6	5110	0.036	0.2885	No
54	NDUFS1	NDUFS1 Entrez, Source	NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	5395	0.030	0.2687	No
55	GTF3C2	GTF3C2 Entrez, Source	general transcription factor IIIC, polypeptide 2, beta 110kDa	5481	0.028	0.2639	No
56	EGR3	EGR3 Entrez, Source	early growth response 3	5611	0.025	0.2556	No
57	SNAP25	SNAP25 Entrez, Source	synaptosomal-associated protein, 25kDa	5798	0.022	0.2427	No
58	NR4A3	NR4A3 Entrez, Source	nuclear receptor subfamily 4, group A, member 3	5891	0.020	0.2369	No
59	ARHGEF12	ARHGEF12 Entrez, Source	Rho guanine nucleotide exchange factor (GEF) 12	5936	0.020	0.2347	No
60	ENO3	ENO3 Entrez, Source	enolase 3 (beta, muscle)	6027	0.018	0.2289	No
61	PELO	PELO Entrez, Source	pelota homolog (Drosophila)	6323	0.011	0.2072	No
62	ESRRA	ESRRA Entrez, Source	estrogen-related receptor alpha	6502	0.008	0.1942	No
63	HSPD1	HSPD1 Entrez, Source	heat shock 60kDa protein 1 (chaperonin)	6772	0.003	0.1740	No
64	LGI4	LGI4 Entrez, Source	leucine-rich repeat LGI family, member 4	6793	0.002	0.1726	No
65	CLCN2	CLCN2 Entrez, Source	chloride channel 2	6939	-0.001	0.1617	No
66	NET1	NET1 Entrez, Source	neuroepithelial cell transforming gene 1	7106	-0.004	0.1494	No
67	TREH	TREH Entrez, Source	trehalase (brush-border membrane glycoprotein)	7209	-0.006	0.1420	No
68	STMN2	STMN2 Entrez, Source	stathmin-like 2	7274	-0.008	0.1376	No
69	GBL	GBL Entrez, Source	-	7286	-0.008	0.1373	No
70	MRPL2	MRPL2 Entrez, Source	mitochondrial ribosomal protein L2	7336	-0.009	0.1341	No
71	DNAJA2	DNAJA2 Entrez, Source	DnaJ (Hsp40) homolog, subfamily A, member 2	7402	-0.010	0.1297	No
72	TMEM24	TMEM24 Entrez, Source	transmembrane protein 24	7510	-0.013	0.1223	No
73	PTHR1	PTHR1 Entrez, Source	parathyroid hormone receptor 1	7539	-0.013	0.1210	No
74	PABPN1	PABPN1 Entrez, Source	poly(A) binding protein, nuclear 1	7634	-0.015	0.1147	No
75	TNFRSF12A	TNFRSF12A Entrez, Source	tumor necrosis factor receptor superfamily, member 12A	7849	-0.020	0.0996	No
76	SOD1	SOD1 Entrez, Source	superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult))	7856	-0.020	0.1003	No
77	LAMP2	LAMP2 Entrez, Source	lysosomal-associated membrane protein 2	7865	-0.020	0.1008	No
78	AP1B1	AP1B1 Entrez, Source	adaptor-related protein complex 1, beta 1 subunit	7977	-0.023	0.0937	No
79	LRP1	LRP1 Entrez, Source	low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor)	8598	-0.037	0.0489	No
80	PRKCD	PRKCD Entrez, Source	protein kinase C, delta	8690	-0.039	0.0442	No
81	LRRN1	LRRN1 Entrez, Source	leucine rich repeat neuronal 1	8766	-0.040	0.0408	No
82	MAP3K11	MAP3K11 Entrez, Source	mitogen-activated protein kinase kinase kinase 11	8842	-0.042	0.0374	No
83	GATA4	GATA4 Entrez, Source	GATA binding protein 4	8964	-0.045	0.0308	No
84	EFEMP1	EFEMP1 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 1	9375	-0.057	0.0030	No
85	AGPS	AGPS Entrez, Source	alkylglycerone phosphate synthase	9442	-0.058	0.0013	No
86	SYMPK	SYMPK Entrez, Source	symplekin	9466	-0.059	0.0028	No
87	PGF	PGF Entrez, Source	placental growth factor, vascular endothelial growth factor-related protein	9515	-0.060	0.0026	No
88	RQCD1	RQCD1 Entrez, Source	RCD1 required for cell differentiation1 homolog (S. pombe)	9601	-0.063	-0.0003	No
89	ARHGEF7	ARHGEF7 Entrez, Source	Rho guanine nucleotide exchange factor (GEF) 7	9623	-0.063	0.0016	No
90	MOBP	MOBP Entrez, Source	myelin-associated oligodendrocyte basic protein	9647	-0.064	0.0035	No
91	TREX1	TREX1 Entrez, Source	three prime repair exonuclease 1	10029	-0.075	-0.0211	No
92	ID1	ID1 Entrez, Source	inhibitor of DNA binding 1, dominant negative helix-loop-helix protein	10098	-0.078	-0.0218	No
93	BIN3	BIN3 Entrez, Source	bridging integrator 3	10102	-0.078	-0.0177	No
94	EXOSC7	EXOSC7 Entrez, Source	exosome component 7	10123	-0.079	-0.0147	No
95	RBMS1	RBMS1 Entrez, Source	RNA binding motif, single stranded interacting protein 1	10149	-0.080	-0.0122	No
96	DCTN2	DCTN2 Entrez, Source	dynactin 2 (p50)	10303	-0.085	-0.0190	No
97	HOXA5	HOXA5 Entrez, Source	homeobox A5	10345	-0.086	-0.0172	No
98	PTMS	PTMS Entrez, Source	parathymosin	10355	-0.087	-0.0130	No
99	CRABP2	CRABP2 Entrez, Source	cellular retinoic acid binding protein 2	10545	-0.093	-0.0221	No
100	PLEC1	PLEC1 Entrez, Source	plectin 1, intermediate filament binding protein 500kDa	10694	-0.098	-0.0278	No
101	PCTK1	PCTK1 Entrez, Source	PCTAIRE protein kinase 1	11022	-0.113	-0.0462	No
102	MARK2	MARK2 Entrez, Source	MAP/microtubule affinity-regulating kinase 2	11045	-0.114	-0.0414	No
103	PFN1	PFN1 Entrez, Source	profilin 1	11162	-0.120	-0.0435	No
104	DCTN1	DCTN1 Entrez, Source	dynactin 1 (p150, glued homolog, Drosophila)	11343	-0.128	-0.0499	No
105	SS18	SS18 Entrez, Source	synovial sarcoma translocation, chromosome 18	11353	-0.129	-0.0434	No
106	ATP1B1	ATP1B1 Entrez, Source	ATPase, Na+/K+ transporting, beta 1 polypeptide	11599	-0.144	-0.0538	No
107	MYH10	MYH10 Entrez, Source	myosin, heavy chain 10, non-muscle	11608	-0.144	-0.0464	No
108	TP53	TP53 Entrez, Source	tumor protein p53 (Li-Fraumeni syndrome)	11690	-0.149	-0.0441	No
109	PICALM	PICALM Entrez, Source	phosphatidylinositol binding clathrin assembly protein	11850	-0.160	-0.0471	No
110	ZDHHC3	ZDHHC3 Entrez, Source	zinc finger, DHHC-type containing 3	11867	-0.162	-0.0393	No
111	FOXA1	FOXA1 Entrez, Source	forkhead box A1	11900	-0.165	-0.0324	No
112	TCN2	TCN2 Entrez, Source	transcobalamin II; macrocytic anemia	11922	-0.167	-0.0246	No
113	ERBB2	ERBB2 Entrez, Source	v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	12237	-0.197	-0.0373	No
114	TIMELESS	TIMELESS Entrez, Source	timeless homolog (Drosophila)	12644	-0.253	-0.0538	No
115	JMJD1C	JMJD1C Entrez, Source	jumonji domain containing 1C	12770	-0.278	-0.0477	No
116	GTF2I	GTF2I Entrez, Source	general transcription factor II, i	12896	-0.319	-0.0392	No
117	SGK	SGK Entrez, Source	serum/glucocorticoid regulated kinase	12997	-0.362	-0.0264	No
118	FGFR3	FGFR3 Entrez, Source	fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism)	13098	-0.424	-0.0102	No
119	PDLIM7	PDLIM7 Entrez, Source	PDZ and LIM domain 7 (enigma)	13170	-0.508	0.0130	No