BICLUSTER_ID : DNREG-106
PATHOGENS /2/ : yersinia enterocolitica,burkholderia pseudomallei
TARGETS /112/ : GSTO1, GMPR2, NDUFA3, CALM3, GPX4, CSNK1G2, IARS2, NDUFA1, GOT2, NDUFS8, SDHC, ADH5, NDUFA8, NDUFB7, NDUFS6, RXRA, PEBP1, PDHA1, FDPS, GM2A, TK1, SUCLA2, QARS, IDH3B, CXCR4, ALAS1, NDUFC1, POLA2, NDUFV2, NDUFS5, NDUFA13, HRSP12, VKORC1, NDUFS7, MAT2B, DLAT, VDAC3, VDAC1, ARL5A, SRM, AMD1, ASRGL1, MCFD2, ASNA1, HRAS, ALDH9A1, IFNAR2, CES1, DNMT1, SC4MOL, ARAF, NDUFS4, CYCS, ME2, CSK, NDUFB6, NDUFA4, GLO1, SDHD, HSD17B4, NAGLU, MDH2, IARS, DHCR7, SQLE, HDAC1, NNT, RAF1, NDUFB8, AHCY, GART, SDHA, SCARB1, ALAD, COMT, SPTLC1, NDUFB5, NDUFS1, IVD, LARS, UQCRC1, NDUFA6, APEX1, SLC29A1, DCXR, GARS, BCAT2, NDUFAB1, CYB5R3, NDUFB2, NDUFS3, CDK2, PDHB, DLD, ATP5D, ERGIC2, HPRT1, PARK7, IDH3G, MAPK3, ACADM, NDUFA2, NDUFB3, RDH14, FADS1, MCM7, HDAC2, FASN, CREB1, QDPR, DARS, BTK
Gene SetLeading Edge Genes
DIAZ CHRONIC MEYLOGENOUS LEUKEMIA UPCDC16, GMPR2, POLE3, CETN3, PSMA2, YY1, FLOT2, SLBP, STK24, GOT2, EI24, PRMT1, ICT1, ADH5, NDUFA8, POLD2, BTBD1, DFFB, ANAPC1, KIF22, EIF2AK1, CD82, XPO1, MFNG, BUB3, PDCD6, RTN3, NFATC3, MAT2B, FEZ2, VTI1B, ASH2L, CDC5L, VDAC3, SCP2, WBSCR22, MARCH6, UBE2G1, ASNA1, SEPHS2, AP2M1, NFE2, DDB1, SC4MOL, ARAF, NDUFS4, CYCS, SSB, MKRN1, HMG20A, SFRS2, ATF2, NDUFB6, GLO1, PRDX3, PHB2, HSD17B4, MDH2, RAD1, TM9SF1, PCK2, SFRS9, TCERG1, C1QBP, TMED3, GART, SLC25A11, ALAD, MED4, SPTLC1, ARCN1, TOPBP1, TAF6, POLR2E, FNTA, SMAD2, PIGC, HMG20B, RPS27L, CBFB, DPAGT1, EBAG9, MTX2, ATP5J2, PPA2, ATP5J, SSBP1, ARPC1A, OXSR1, NDUFAB1, AK2, LSM4, RAB4A, NIF3L1, DRAP1, BAG4, PDHB, BIRC2, TOMM22, NIT2, RER1, HBS1L, EIF4ENIF1, CMAS, PUM2, ACADM, MRPS15, CRBN, COIL, SNX1, TADA3L, GNB2, PNN, DDX41, NUP50, CNOT8, RASA1, FADS1, PCYT2, HDAC2, RNF5, ATXN10, DARS, AUP1, MYCBP, RFC3, MAGOH, ABCE1, RBBP4, CETN2, STK25, DAD1, GBAS, PRDX4, ALG5, NGRN, LSM1, MRPL3, TCF12, RAD50, MRPL49, CYC1, BNIP3L, B3GALNT1, POLR1D, CUL4A, CHERP, ACTL6A, PSMD10, C1D, CPSF1, PEBP1, FDPS, GM2A, PRMT5, RALBP1, CNIH, IDH3B, ALAS1, STAG2, CHD1L, CTCF, LSM8, NDUFV2, KLHDC2, HRSP12, ARL5A, PHKB, AMD1, XPNPEP1, ALDH9A1, EPS15, RUVBL1, LAPTM4B, SMC3, NUDT21, GMNN, PECI, GNS, ARF3, FDFT1, IKBKAP, CFDP1, USP1, SMC4, CAPZB, ERGIC3, HDAC1, SQLE, CASP8AP2, SFRS3, RTCD1, RAD21, SDF4, DBF4, PTPN6, HADHB, STOML2, COMT, PRKAG1, PRPS1, NDUFB5, IVD, UCHL5, ICMT, ORC5L, SF3A3, ANAPC5, SFRS4, CAB39, PDCD2, LANCL1, GARS, TM9SF2, SLC29A1, NME7, CDK2AP1, ST13, TMEM165, RHOG, ING2, MTA1, CDK2, ZNF22, APEH, LSM5, HMBS, BSG, MXI1, CCNH, LASS2, PSMC3, UBP1, ACO1, HMGB1, TPI1, SNRPB2, UBE2G2, PSIP1, MSH6, LBR, TSNAX, SRI, RAD17, RAP1GDS1, DHX9, ANP32A, ZMPSTE24, H2AFV, ACLY, KIFAP3, BTK
REACTOME REGULATION OF INSULIN SECRETIONATP5I, NDUFA3, NDUFB8, UQCRH, SDHA, NDUFA1, ATP5H, NDUFB5, NDUFS1, NDUFS8, CYC1, SDHC, NDUFA8, NDUFA6, UQCRC1, NDUFB7, ATP5G1, ATP5J2, ATP5J, PDHA1, COX6B1, NDUFAB1, COX7A2L, NDUFB2, COX6C, UQCRC2, NDUFS3, ATP5F1, NDUFB11, IDH3B, NDUFC1, COX5A, NDUFV2, NDUFS5, NDUFA13, PDHB, ATP5C1, NDUFS7, ATP5D, DLAT, IDH3G, COX5B, NDUFA2, TPI1, NDUFB3, GNB2, ETFB, NDUFS4, CYCS, COX4I1, UQCRQ, NDUFB6, NDUFA4, COX8A, COX7C, MDH2, ATP5L
KEGG ALZHEIMERS DISEASECALM3, NDUFA3, ATP5G2, NDUFB8, UQCRH, SDHA, NDUFA1, ATP5H, NDUFB5, NDUFS1, NDUFS8, CYC1, SDHC, NDUFA8, NDUFA6, UQCRC1, NDUFB7, NDUFS6, ATP5G1, ATP5J, COX6B1, ATP5E, NDUFAB1, COX7A2L, NDUFB2, COX6C, UQCRC2, NDUFS3, ATP5F1, NCSTN, NDUFC1, COX5A, NDUFV2, NDUFS5, ATP5C1, NDUFS7, ATP5D, MAPK3, PLCB3, COX5B, NDUFA2, NDUFB3, NDUFS4, CYCS, COX4I1, EIF2AK3, UQCRQ, COX7A2, NDUFB6, NDUFA4, COX8A, COX7C, SDHD, PSEN1
SPIELMAN LYMPHOBLAST EUROPEAN VS ASIAN UPPIN1, RBBP4, NDUFA3, TEX264, GPX4, CSNK1G2, MRPL23, NDUFA1, EI24, DVL1, NDUFS8, BLOC1S1, ERCC5, STT3A, CUL4A, NDUFB7, ACTL6A, EIF4EBP1, RXRA, PEBP1, COX6B1, FDPS, KIF22, DDT, BAZ1B, NDUFB11, PNRC1, NDUFV2, NDUFS5, POLA2, RTN3, ENSA, VDAC3, NENF, NUTF2, WDR8, IFNAR2, FKBP2, FAU, CSK, UQCRQ, TMC6, CFDP1, TACC3, NAGLU, ERH, DHCR7, KIF20A, HDAC1, PCK2, ATP5I, ATP5G2, C1QBP, POLR2I, NDUFB8, AHCY, RAD21, SEC22A, UBL5, PTPN6, ICMT, UQCRC1, RPS27L, DCXR, MBD3, ATP5J2, BCAT2, PPA2, ATP5J, CKS2, CYB5R3, PEX14, MTA1, LSM4, COX6C, BANF1, DUS1L, HMBS, EBP, SCAND1, UCP2, TCEB2, E4F1, TAF10, PARK7, COX5B, SRP14, RPN1, HMGB1, NDUFA2, PGLS, TADA3L, MEA1, RPS6KB1, HMGN1, COX4I1, H2AFV, HDAC2, PSMB3, DARS, ARHGDIB
KEGG HUNTINGTONS DISEASEHDAC1, NDUFA3, ATP5G2, POLR2I, NDUFB8, UQCRH, SDHA, NDUFA1, ATP5H, NDUFS1, NDUFS8, CYC1, POLR2J, AP2S1, SDHC, POLR2G, NDUFA8, POLR2E, NDUFA6, UQCRC1, NDUFB7, POLR2D, ATP5G1, ATP5J, COX6B1, POLR2H, CREB3L2, NDUFAB1, COX7A2L, NDUFB2, COX6C, UQCRC2, NDUFS3, ATP5F1, NDUFC1, COX5A, NDUFV2, NDUFS5, ATP5C1, NDUFS7, POLR2L, VDAC3, VDAC1, COX5B, NDUFA2, AP2M1, POLR2F, NDUFS4, COX4I1, UQCRQ, COX7A2, NDUFB6, NDUFA4, HDAC2, COX8A, COX7C, CREB1
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UPGSTO1, MAGOH, CETN2, DAD1, ZMYM6, DYNLRB1, IARS2, SDF2L1, BRP44, STT3A, ICT1, SDHC, NDUFA8, BOLA1, TFB2M, MCTS1, ACTL6A, HYOU1, PSMD10, SSR2, CREB3L2, TK1, CNIH, XPO1, CTCF, NUDT2, SCNM1, GOLT1B, CDC5L, CUEDC2, NUCB2, UBTD1, GNPAT, MRPL40, MCFD2, SMC3, CES1, TMEM147, WDR8, DNMT1, GMNN, MRPS17, RPL36AL, APIP, NUP37, SFRS2, SPCS2, NAGA, NDUFB6, ARF3, DNAJC9, MYLIP, WDR61, RPA1, VPS28, MRPL48, DYNLL1, SFRS3, RTCD1, SEC61B, RSRC1, C1QBP, MTM1, COPE, CNIH4, AHCY, RFX5, PRPSAP1, ANKMY2, SNRPB, NUP133, LARS, UCHL5, THAP11, PIGC, APEX1, METAP1, PDIA6, BCAT2, TCFL5, METTL3, POLR2H, CKS2, LSM4, GOLPH3L, FRAT2, ZFAND1, SURF1, ASPM, HPRT1, TMED10, SLC35B1, RBBP7, EIF4ENIF1, RPA3, NEDD8, PPP1CA, CCNA2, NDUFB3, MEA1, MSH6, ADIPOR1, HIGD1A, TSNAX, RDH14, COX7A2, CORO1B, GABARAPL2, ZMPSTE24, MRPL24, KIFAP3, ACLY, KDELR2
KRIGE RESPONSE TO TOSEDOSTAT 24HR DNHDGF, CETN2, PRDX4, PSMA2, MRPL23, AIF1, YY1, NTHL1, MRPL12, SDF2L1, EI24, HSPE1, CLEC11A, TIMM13, NDUFB7, TFB2M, POLD2, HDDC2, PEBP1, SYNGR2, CREB3L2, NUP88, PRMT5, VAMP8, MFNG, IDH3B, NDUFS5, VKORC1, VDAC1, RNF126, ATAD3A, AMD1, GGA2, COX4NB, RUVBL1, PHB, TMEM147, PPP1R14B, SNRPA1, RPP40, PECI, WDR77, SLC39A4, SCRIB, MYLIP, RPIA, CD302, IKBKAP, CFDP1, NXT1, SMC4, IMP3, TMEM50B, SQLE, ATP5I, TUSC4, C1QBP, MRPS34, IMP4, DNAJC11, GART, SCARB1, PRPS1, HEATR1, ANAPC5, GADD45GIP1, POLR2E, POLR2D, SLC29A1, MRP63, POLR2H, NDUFAB1, CEBPA, NDUFS3, EBP, ZFP36L2, EXOSC7, MRPS12, TOMM22, PMVK, COIL, MSH6, POLR2F, MRPL24, HDAC2
KRIGE RESPONSE TO TOSEDOSTAT 6HR DNHDGF, CETN2, PRDX4, PSMA2, MRPL23, AIF1, YY1, NTHL1, MRPL12, SDF2L1, EI24, HSPE1, BNIP3L, CLEC11A, TIMM13, NDUFB7, POLD2, TFB2M, HDDC2, PEBP1, SYNGR2, CREB3L2, NUP88, PRMT5, VAMP8, MFNG, IDH3B, NDUFC1, NDUFS5, VKORC1, VDAC1, RNF126, ATAD3A, AMD1, GGA2, COX4NB, RUVBL1, PHB, TMEM147, PPP1R14B, SNRPA1, WDR77, SLC39A4, SCRIB, SMYD2, MYLIP, RPIA, CD302, IKBKAP, CFDP1, SMC4, IMP3, TMEM50B, SQLE, ATP5I, TUSC4, C1QBP, MRPS34, IMP4, DNAJC11, GART, SCARB1, PRPS1, HEATR1, ANAPC5, GADD45GIP1, POLR2E, POLR2D, SLC29A1, MRP63, POLR2H, CEBPA, NDUFS3, EBP, ZFP36L2, EXOSC7, MRPS12, TOMM22, COIL, MSH6, POLR2F, MRPL24, HDAC2
NUYTTEN EZH2 TARGETS DNORMDL2, GMPR2, TMPO, CETN3, CENPA, PRMT1, POLR2G, NCAPH, FANCE, SP3, SLC30A5, FIBP, EIF4EBP2, KIF22, PUS7, SSRP1, CCT4, EIF2AK1, NDUFB11, BUB3, CSE1L, NUP155, ASRGL1, NUTF2, YWHAH, NUP37, MYH9, MKRN1, MBTPS1, TUBGCP3, RFWD3, PCK2, TCERG1, ZWINT, GART, MRPS33, PRPSAP1, SLC25A11, SYPL1, SHCBP1, PTPN18, HMGB3, ARCN1, TOPBP1, CNOT1, KIF3A, MRPL11, DHRS7B, COMMD4, CERK, ZFAND1, ASPM, HPRT1, ERGIC2, DDHD2, CMAS, SNAPC5, CCNA2, KIF4A, TTK, FADS1, HDAC2, NT5DC2, CDKN3, RDBP, TARBP2, RPL18, EXOSC8, C1D, AUH, NASP, PEBP1, NUP88, BAZ1B, PSRC1, NDUFV2, GOLT1B, MRPS16, GNPAT, ZWILCH, GGA2, SMC3, NUDT21, SAC3D1, ETFB, GMNN, PIGP, PTTG1, WIPI2, PYCARD, TSN, TACC3, SMC4, NXT1, RNF44, BIRC5, KIF20A, PAK2, SNRPB, KLHDC3, PREB, HEATR1, BCLAF1, NFYA, SLC29A1, POP5, MRP63, CYB5R3, THYN1, BANF1, LSM5, NEK9, HMBS, FANCG, RBM38, RPA3, POLD1, HMGB1, LEPROTL1, LBR, PSPH, KIF23, POT1, ANP32A, MCM7, MRPL24, H2AFV, PRC1, LAT2
REACTOME CITRIC ACID CYCLENNT, DLD, SDHA, IDH3G, SUCLA2, SDHD, MDH2, SDHC, IDH3B
PENG GLUTAMINE DEPRIVATION DNSQLE, SLC19A1, PRDX4, RNF126, MRPL23, TMED10, CSE1L, SRM, PTPN6, MRPL12, HRAS, PRPS1, HSPE1, PRMT1, FKBP2, SLC29A1, CCT5, TMED9, MLLT11, PSMB3, FASN, BTK
IVANOVA HEMATOPOIESIS EARLY PROGENITORGSTO1, PARP8, MRPS12, AHCY, GART, DYNLRB1, PRPSAP1, RPL22, SNRPB2, TFB2M, ARL2, CBFB, ARMET, FAM60A, GLB1, DHX9, MGAT2, H2AFV, QDPR, DHCR7
THEILGAARD NEUTROPHIL AT SKIN WOUND DNMYCBP, CORO1A, RGS19, UQCR, LST1, RAF1, YY1, FLOT2, STK24, SPTLC1, TOPBP1, POLR2J, SFRS4, TKT, RALBP1, ZFP36L2, FEZ2, PHKB, RPS6KA1, COX5B, NFE2, PPP1CA, OGT, TADA3L, RASGRP2, GNB2, PLCG2, SRP9, LBR, INPP5D, ME2, RASA1, DHX9, ZMPSTE24, PRDX3, ACLY, USP1, CAPZB, ARHGDIB, RABIF
MOREAUX MULTIPLE MYELOMA BY TACI DNPDCD6, NDUFA13, SLC25A36, C1QBP, MRPS12, DBF4, BTBD1, ACTL6A, CCT5, TMEM165, SSBP1, MYLIP, SF3B2, BUB3, IARS, LSM5, DARS
CORUM MTA2 COMPLEXHDAC1, RBBP7, HDAC2, RBBP4, CHD4, MBD3
CORUM NURD.1 COMPLEXHDAC1, RBBP7, HDAC2, MTA1, RBBP4, CHD4, MBD3
CORUM SNF2H-COHESIN-NURD COMPLEXHDAC1, RBBP4, MBD3, RAD21, RBBP7, HDAC2, MTA1, SMC3, STAG2
ZHONG RESPONSE TO AZACITIDINE AND TSA DNHDGF, PDCD2, LSM7, CIRBP, GOLPH3L, RPL22, ANP32B, CCNA2, ICT1, NDUFC1
JIANG HYPOXIA CANCERSFRS9, MRPS34, E4F1, RPN2, GLT25D1, GOT2, SUMO1, RPL22, KIF4A, SLA, HMG20B, NCAPG2, ITGAE, PRMT5, CCDC56, SH3BGRL3, AUP1
REACTOME HIV INFECTIONRDBP, POLR2I, PSMA2, RAN, NUP133, TAF6, POLR2J, AP2S1, POLR2E, POLR2D, PSMD10, POLR2H, NUP88, SSRP1, BANF1, XPO1, CXCR4, PSMD5, POLR2L, TCEB2, CCNH, TAF10, PSMC3, NUP155, PSMD9, AP2M1, KPNB1, RBX1, PSIP1, POLR2F, NUP50, NUP37, PSMB3
NCI REGULATION OF APC C ACTIVATORS BETWEEN G1 S AND EARLY ANAPHASECDC16, ANAPC2, CDK2, ANAPC5, ANAPC1
CHNG MULTIPLE MYELOMA HYPERPLOID UPRPL35, SCAMP5, RPLP1, RPS14, RPS16, CLTA, NCBP2, RPL18, RPS9, RPS19, RPL7A, RPL14, RPLP2, RPL28, EIF4A2, MRPL34, RPL13A, RPS15, QARS, IMP3
REACTOME CELL CYCLE MITOTIC
CORUM ANTI-HDAC2 COMPLEX
KEGG CITRATE CYCLE TCA CYCLE
NCI PAUSING AND RECOVERY OF ELONGATION
NCI RNA POLYMERASE II TRANSCRIPTION PRE INITIATION
REACTOME NUCLEOTIDE EXCISION REPAIR
CORUM DDB2 COMPLEX
REACTOME CENTROSOME MATURATION
CORUM C COMPLEX SPLICEOSOMESNRPE, MAGOH, CDC5L, SNRPD3, SNRPB, PRPF19, SF3B3, AQR, SF3A3, SNRPA1, SNRPB2, PRPF8, PNN, DDX41, ZCCHC8, LSM3, SFRS1, SF3B2, PRPF4B, SNRPD2, LSM2
CORUM F1F0-ATP SYNTHASE EC 3.6.3.14 MITOCHONDRIAL
REACTOME RNA POLYMERASE III TRANSCRIPTION INITIATION
LINDGREN BLADDER CANCER WITH LOH IN CHR9Q
REACTOME GLUCOSE REGULATION OF INSULIN SECRETION
COLDREN GEFITINIB RESISTANCE UP
KEGG RNA POLYMERASE
KEGG SPLICEOSOME
NCI RNA POLYMERASE II TRANSCRIPTION ELONGATION
STARK PREFRONTAL CORTEX 22Q11 DELETION DN
ZHANG RESPONSE TO CANTHARIDIN DN
REACTOME HOST INTERACTIONS OF HIV FACTORS
REACTOME APCDC20 MEDIATED DEGRADATION OF CYCLIN B
REACTOME TAT MEDIATED HIV1 ELONGATION ARREST AND RECOVERY
CORUM RIBOSOME CYTOPLASMIC
REACTOME LATE PHASE OF HIV LIFE CYCLERDBP, POLR2L, TCEB2, POLR2I, CCNH, TAF10, NUP155, RAN, NUP133, TAF6, POLR2J, POLR2E, POLR2D, POLR2F, NUP50, NUP37, POLR2H, SSRP1, NUP88, XPO1
CORUM RESPIRATORY CHAIN COMPLEX I INCOMPLETE INTERMEDIATE MITOCHONDRIAL
CORUM 17S U2 SNRNPSNRPE, HMG20B, SF3B5, SF3B2, SNRPB, SNRPD2, SF3A3, SNRPA1, SNRPB2, CHERP
NCI ELONGATION ARREST AND RECOVERY
CORUM RESPIRATORY CHAIN COMPLEX I INTERMEDIATE VII/650KD MITOCHONDRIAL
NCI TRANSCRIPTION COUPLED NER TC NER
KEGG OXIDATIVE PHOSPHORYLATION
SHEN SMARCA2 TARGETS UP
REACTOME INTEGRATION OF ENERGY METABOLISM
CORUM RNA POLYMERASE II CORE COMPLEX
NCI FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX
REACTOME HIV1 TRANSCRIPTION INITIATION
REACTOME MICRORNA BIOGENESIS
GARY CD5 TARGETS DN
ZHOU INFLAMMATORY RESPONSE LPS DN
NCI RNA POLYMERASE II TRANSCRIPTION INITIATION
BYSTRYKH HEMATOPOIESIS STEM CELL AND BRAIN QTL CIS
NCI RNA POLYMERASE III TRANSCRIPTION INITIATION FROM TYPE 3 PROMOTER
NCI RNA POLYMERASE II HIV 1 PROMOTER ESCAPE
NCI PROCESSING OF CAPPED INTRON CONTAINING PRE MRNAPOLR2E, POLR2D, POLR2F, HNRPH1, POLR2I, POLR2L, METTL3, POLR2J
REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS
CORUM ANAPHASE-PROMOTING COMPLEX
NCI CLEAVAGE OF GROWING TRANSCRIPT IN THE TERMINATION REGION SFRS4, SFRS9, MAGOH, CPSF1, SFRS2, SFRS7, RNPS1, NUDT21
REACTOME HIV1 TRANSCRIPTION ELONGATION
NCI APC C CDC20 MEDIATED DEGRADATION OF CYCLIN B
CORUM SPLICEOSOMEPRPF31, TCERG1, SFRS9, SFRS3, MAGOH, SNRPB, AQR, SF3A3, SFRS4, SFRS7, RNPS1, LSM4, WTAP, CIRBP, PRPF4B, LSM2, SNRPE, CDC5L, LSM7, PPM1G, BUD31, THOC1, SNRPA1, NUDT21, SYF2, SNRPB2, DDX41, SFRS2, THOC7, DHX9, SF3B2, SNRPD2, RBM39, DDX17
NCI INACTIVATION OF APC C VIA DIRECT INHIBITION OF THE APC C COMPLEXCDC16, ANAPC2, BUB3, ANAPC5, ANAPC1
NCI PAUSING AND RECOVERY OF HIV 1 ELONGATION
NCI TAT MEDIATED HIV 1 ELONGATION ARREST AND RECOVERY
NCI MICRORNA MIRNA BIOGENESIS
REACTOME FORMATION AND MATURATION OF MRNA TRANSCRIPT
NCI MRNA 3 END PROCESSINGSFRS4, SFRS9, MAGOH, CPSF1, SFRS2, SFRS7, RNPS1, NUDT21
MOOTHA PGC
REACTOME PHOSPHORYLATION OF THE APC
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 17
KEGG NUCLEOTIDE EXCISION REPAIRPOLD2, RFC3, POLE3, CETN2, CCNH, RPA3, ERCC5, CUL4A
REACTOME TRANSCRIPTION OF THE HIV GENOME
BENPORATH MYC MAX TARGETS
NCI CITRIC ACID CYCLE TCA CYCLE
NCI HIV 1 TRANSCRIPTION INITIATION
GRADE COLON CANCER UP
NCI TAT MEDIATED ELONGATION OF THE HIV 1 TRANSCRIPT
REACTOME CELL CYCLE CHECKPOINTSPSMD5, RFC3, CDC16, RAD17, RFC2, ANAPC1, DBF4, PSMC3, PSMB3, RPA3, ANAPC2, ANAPC5, BUB3
REACTOME CONVERSION FROM APC CDC20 TO APC CDH1 IN LATE ANAPHASE
REACTOME RNA POLYMERASE II TRANSCRIPTIONRDBP, SFRS9, MAGOH, POLR2L, TCEB2, POLR2I, TAF10, TAF6, NUDT21, POLR2J, SFRS4, POLR2E, POLR2D, POLR2F, CPSF1, SFRS2, SFRS7, POLR2H, SSRP1, RNPS1, CSTF1
MOOTHA HUMAN MITODB 6 2002
NCI PHOSPHORYLATION OF THE APC CCDC16, ANAPC2, ANAPC5, ANAPC1
NCI GLOBAL GENOMIC NER GG NER
REACTOME ABORTIVE ELONGATION OF HIV1 TRANSCRIPT IN THE ABSENCE OF TAT
NCI APC C CDC20 MEDIATED DEGRADATION OF MITOTIC PROTEINSCDC16, ANAPC2, BUB3, ANAPC5, ANAPC1
NCI HIV 1 ELONGATION ARREST AND RECOVERY
REACTOME GLOBAL GENOMIC NER
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 10
REACTOME ELONGATION AND PROCESSING OF CAPPED TRANSCRIPTS
REACTOME TRANSCRIPTION COUPLED NERPOLR2E, POLD2, RFC3, POLR2D, POLR2F, RFC1, RFC2, POLR2I, POLR2L, POLR2H, RPA3, ERCC5, POLR2J
ZHANG RESPONSE TO IKK INHIBITOR AND TNF DN
NCI RNA POLYMERASE II TRANSCRIPTION
REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING
CORUM NUA4/TIP60 HAT COMPLEX
NCI RNA POLYMERASE III TRANSCRIPTION INITIATION FROM TYPE 1 PROMOTER
REACTOME VIRAL MESSENGER RNA SYNTHESIS
KEGG PYRIMIDINE METABOLISM
REACTOME DNA REPAIR
REACTOME INACTIVATION OF APC VIA DIRECT INHIBITION OF THE APCOMPLEXCDC16, ANAPC2, BUB3, ANAPC5, ANAPC1
NCI DUAL INCISION REACTION IN TC NER
NCI PAUSING AND RECOVERY OF TAT MEDIATED HIV 1 ELONGATION
REACTOME FORMATION OF THE EARLY ELONGATION COMPLEX
CORUM RAD17-RFC COMPLEX
CORUM NUA4/TIP60-HAT COMPLEX A
REACTOME G2 M CHECKPOINTS
MOOTHA TCA
NCI FORMATION OF HIV 1 ELONGATION COMPLEX CONTAINING HIV 1 TAT
REACTOME REGULATION OF APC ACTIVATORS BETWEEN G1 S AND EARLY ANAPHASE
REACTOME MRNA 3 END PROCESSING
MORI PLASMA CELL UP
REACTOME GENE EXPRESSION
NCI FORMATION OF RNA POL II ELONGATION COMPLEX
KEGG PARKINSONS DISEASE
NCI ELONGATION OF INTRON CONTAINING TRANSCRIPTS AND CO TRANSCRIPTIONAL MRNA SPLICINGPOLR2E, POLR2F, POLR2I, POLR2L, METTL3, CCNH, POLR2H, HNRPA3, POLR2J
CORUM DYNACTIN COMPLEX DCTN1 DCTN2 DCTN3 DCTN4 DCTN6 CAPZA1 CAPZB ACTR1A
CORUM RESPIRATORY CHAIN COMPLEX I BETA SUBUNIT MITOCHONDRIAL
NCI APC C MEDIATED DEGRADATION OF CELL CYCLE PROTEINS
CORUM BRCA1-CORE RNA POLYMERASE II COMPLEX
CORUM 39S RIBOSOMAL SUBUNIT MITOCHONDRIALMRPL9, MRPL19, MRPL11, MRPL23, MRPL35, MRPL24, MRPL3, MRPL49, MRPL12, MRPL40, MRPL34, MRPL16, MRPL39, MRPL48, MRPL18
NCI APC CDC20 MEDIATED DEGRADATION OF NEK2ACDC16, ANAPC2, BUB3, ANAPC5, ANAPC1
NCI RNA POLYMERASE II PROMOTER ESCAPE
DAIRKEE TERT TARGETS UP
MOOTHA MITOCHONDRIA
CORUM RAP1 COMPLEX
LEE METASTASIS AND RNA PROCESSING UP
NCI ABORTIVE ELONGATION OF HIV 1 TRANSCRIPT IN THE ABSENCE OF TAT
PENG RAPAMYCIN RESPONSE DN
NCI CONVERSION FROM APC C CDC20 TO APC C CDH1 IN LATE ANAPHASE
BANDRES RESPONSE TO CARMUSTIN MGMT 48HR UP
CORUM RESPIRATORY CHAIN COMPLEX I LAMBDA SUBUNIT MITOCHONDRIAL
NCI DUAL INCISION REACTION IN GG NER
REACTOME RNA POLYMERASE III TRANSCRIPTION
NCI FORMATION OF INCISION COMPLEX IN GG NER
REACTOME DUAL INCISION REACTION IN TC NER
AGUIRRE PANCREATIC CANCER COPY NUMBER UP
REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION
BOYAULT LIVER CANCER SUBCLASS G3 UP
CORUM SRCAP-ASSOCIATED CHROMATIN REMODELING COMPLEX
OUELLET CULTURED OVARIAN CANCER INVASIVE VS LMP UP
NCI FORMATION AND MATURATION OF MRNA TRANSCRIPT
NCI RNA POLYMERASE II TRANSCRIPTION INITIATION AND PROMOTER CLEARANCE
REACTOME TRANSCRIPTION
NCI HIV 1 TRANSCRIPTION PRE INITIATION
NCI FORMATION OF ATP BY CHEMIOSMOTIC COUPLING
CORUM 60S RIBOSOMAL SUBUNIT CYTOPLASMIC
REACTOME HIV LIFE CYCLE
REACTOME DUAL INCISION REACTION IN GG NER
NCI TRANSCRIPTION OF THE HIV GENOME
AGUIRRE PANCREATIC CANCER COPY NUMBER DN
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q-value-1-0.2-0.05-0.01-0.001-0.0001
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TABLE OF Q-VALUES
burkholderia pseudomalleiyersinia enterocolitica p60 bcGeneSet Name
-0.00020 -0.07649DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP
-0.00728 -0.16086REACTOME_REGULATION_OF_INSULIN_SECRETION
-0.01165 -0.18485KEGG_ALZHEIMERS_DISEASE
-0.00050 -0.02395SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP
-0.00796 -0.00026KEGG_HUNTINGTONS_DISEASE
-0.00532 -0.08472ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.00072 -0.16920KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN
-0.00077 -0.13313KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN
-0.00050 -0.11233NUYTTEN_EZH2_TARGETS_DN
-0.01561 -0.13372REACTOME_CITRIC_ACID_CYCLE
-0.00050 -0.15640PENG_GLUTAMINE_DEPRIVATION_DN
-0.00830 -0.00178IVANOVA_HEMATOPOIESIS_EARLY_PROGENITOR
-0.00036 -0.06562THEILGAARD_NEUTROPHIL_AT_SKIN_WOUND_DN
-0.00204 -0.01804MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.00563 -0.11907CORUM_MTA2_COMPLEX
-0.00626 -0.19739CORUM_NURD.1_COMPLEX
-0.00350 -0.18701CORUM_SNF2H-COHESIN-NURD_COMPLEX
-0.00012 -0.03477ZHONG_RESPONSE_TO_AZACITIDINE_AND_TSA_DN
-0.01791 -0.15253JIANG_HYPOXIA_CANCER
-0.01885 -0.00409REACTOME_HIV_INFECTION
-0.01297 -0.08096NCI_REGULATION_OF_APC_C_ACTIVATORS_BETWEEN_G1_S_AND_EARLY_ANAPHASE
-0.00708 -0.14992CHNG_MULTIPLE_MYELOMA_HYPERPLOID_UP
-0.00064 -0.19845REACTOME_CELL_CYCLE_MITOTIC
-0.02431 -0.17075CORUM_ANTI-HDAC2_COMPLEX
-0.00078 -0.09949KEGG_CITRATE_CYCLE_TCA_CYCLE
-0.04401 -0.00164NCI_PAUSING_AND_RECOVERY_OF_ELONGATION
-0.16631 -0.00291NCI_RNA_POLYMERASE_II_TRANSCRIPTION_PRE_INITIATION
-0.00208 -0.00115REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.19429 -0.02262CORUM_DDB2_COMPLEX
-0.03691 -0.13388REACTOME_CENTROSOME_MATURATION
-0.00007 -0.07569CORUM_C_COMPLEX_SPLICEOSOME
-0.03491 -0.11532CORUM_F1F0-ATP_SYNTHASE_EC_3.6.3.14_MITOCHONDRIAL
-0.08919 -0.07205REACTOME_RNA_POLYMERASE_III_TRANSCRIPTION_INITIATION
-0.08712 -0.04471LINDGREN_BLADDER_CANCER_WITH_LOH_IN_CHR9Q
-0.00096 -0.00239REACTOME_GLUCOSE_REGULATION_OF_INSULIN_SECRETION
-0.01011 -0.15142COLDREN_GEFITINIB_RESISTANCE_UP
-0.11043 -0.01202KEGG_RNA_POLYMERASE
-0.00035 -0.00244KEGG_SPLICEOSOME
-0.10837 -0.00028NCI_RNA_POLYMERASE_II_TRANSCRIPTION_ELONGATION
-0.00725 -0.00010STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN
-0.00001 -0.11903ZHANG_RESPONSE_TO_CANTHARIDIN_DN
-0.02855 -0.18405REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS
-0.02193 -0.03481REACTOME_APCDC20_MEDIATED_DEGRADATION_OF_CYCLIN_B
-0.03017 -0.00158REACTOME_TAT_MEDIATED_HIV1_ELONGATION_ARREST_AND_RECOVERY
-0.17916 -0.14957CORUM_RIBOSOME_CYTOPLASMIC
-0.01716 -0.00407REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE
-0.07629 -0.04349CORUM_RESPIRATORY_CHAIN_COMPLEX_I_INCOMPLETE_INTERMEDIATE_MITOCHONDRIAL
-0.00035 -0.07691CORUM_17S_U2_SNRNP
-0.04738 -0.00172NCI_ELONGATION_ARREST_AND_RECOVERY
-0.10131 -0.05634CORUM_RESPIRATORY_CHAIN_COMPLEX_I_INTERMEDIATE_VII/650KD_MITOCHONDRIAL
-0.06424 -0.00123NCI_TRANSCRIPTION_COUPLED_NER__TC_NER_
-0.00040 -0.00157KEGG_OXIDATIVE_PHOSPHORYLATION
-0.01592 -0.07407SHEN_SMARCA2_TARGETS_UP
-0.00518 -0.01223REACTOME_INTEGRATION_OF_ENERGY_METABOLISM
-0.16600 -0.00970CORUM_RNA_POLYMERASE_II_CORE_COMPLEX
-0.05508 -0.00159NCI_FORMATION_OF_TRANSCRIPTION_COUPLED_NER__TC_NER__REPAIR_COMPLEX
-0.14125 -0.00182REACTOME_HIV1_TRANSCRIPTION_INITIATION
-0.04408 -0.00895REACTOME_MICRORNA_BIOGENESIS
-0.07082 -0.16036GARY_CD5_TARGETS_DN
-0.07480 -0.00194ZHOU_INFLAMMATORY_RESPONSE_LPS_DN
-0.16380 -0.00249NCI_RNA_POLYMERASE_II_TRANSCRIPTION_INITIATION
-0.08755 -0.01872BYSTRYKH_HEMATOPOIESIS_STEM_CELL_AND_BRAIN_QTL_CIS
-0.15197 -0.09945NCI_RNA_POLYMERASE_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER
-0.15757 -0.00239NCI_RNA_POLYMERASE_II_HIV_1_PROMOTER_ESCAPE
-0.00316 -0.00893NCI_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
-0.00178 -0.06137REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS
-0.08661 -0.07605CORUM_ANAPHASE-PROMOTING_COMPLEX
-0.00435 -0.07193NCI_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_
-0.07318 -0.00019REACTOME_HIV1_TRANSCRIPTION_ELONGATION
-0.02537 -0.03372NCI_APC_C_CDC20_MEDIATED_DEGRADATION_OF_CYCLIN_B
-0.00004 -0.00310CORUM_SPLICEOSOME
-0.01195 -0.02778NCI_INACTIVATION_OF_APC_C_VIA_DIRECT_INHIBITION_OF_THE_APC_C_COMPLEX
-0.05092 -0.00126NCI_PAUSING_AND_RECOVERY_OF_HIV_1_ELONGATION
-0.05521 -0.00197NCI_TAT_MEDIATED_HIV_1_ELONGATION_ARREST_AND_RECOVERY_
-0.06554 -0.00897NCI_MICRORNA__MIRNA__BIOGENESIS
-0.00012 -0.00008REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT
-0.00331 -0.07271NCI_MRNA_3__END_PROCESSING
-0.02598 -0.03396MOOTHA_PGC
-0.03217 -0.01438REACTOME_PHOSPHORYLATION_OF_THE_APC
-0.00017 -0.00005YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_17
-0.01443 -0.00507KEGG_NUCLEOTIDE_EXCISION_REPAIR
-0.09378 -0.00029REACTOME_TRANSCRIPTION_OF_THE_HIV_GENOME
-0.00007 -0.11972BENPORATH_MYC_MAX_TARGETS
-0.05466 -0.09501NCI_CITRIC_ACID_CYCLE__TCA_CYCLE_
-0.17717 -0.00239NCI_HIV_1_TRANSCRIPTION_INITIATION
-0.00534 -0.08637GRADE_COLON_CANCER_UP
-0.12223 -0.00030NCI_TAT_MEDIATED_ELONGATION_OF_THE_HIV_1_TRANSCRIPT
-0.02029 -0.07433REACTOME_CELL_CYCLE_CHECKPOINTS
-0.12226 -0.06568REACTOME_CONVERSION_FROM_APC_CDC20_TO_APC_CDH1_IN_LATE_ANAPHASE
-0.01090 -0.00010REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION
-0.00317 -0.00061MOOTHA_HUMAN_MITODB_6_2002
-0.01882 -0.01205NCI_PHOSPHORYLATION_OF_THE_APC_C
-0.15590 -0.02387NCI_GLOBAL_GENOMIC_NER__GG_NER_
-0.05182 -0.00297REACTOME_ABORTIVE_ELONGATION_OF_HIV1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.00947 -0.03830NCI_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS
-0.05857 -0.00138NCI_HIV_1_ELONGATION_ARREST_AND_RECOVERY
-0.01224 -0.02289REACTOME_GLOBAL_GENOMIC_NER
-0.00205 -0.01174YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_10
-0.00002 -0.00005REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS
-0.00209 -0.00195REACTOME_TRANSCRIPTION_COUPLED_NER
-0.14069 -0.03791ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_DN
-0.16670 -0.00284NCI_RNA_POLYMERASE_II_TRANSCRIPTION
-0.05144 -0.11943REACTOME_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING
-0.09935 -0.16722CORUM_NUA4/TIP60_HAT_COMPLEX
-0.11047 -0.15191NCI_RNA_POLYMERASE_III_TRANSCRIPTION_INITIATION_FROM_TYPE_1_PROMOTER
-0.10174 -0.01582REACTOME_VIRAL_MESSENGER_RNA_SYNTHESIS
-0.00190 -0.16053KEGG_PYRIMIDINE_METABOLISM
-0.00513 -0.01104REACTOME_DNA_REPAIR
-0.01448 -0.02990REACTOME_INACTIVATION_OF_APC_VIA_DIRECT_INHIBITION_OF_THE_APCOMPLEX
-0.06425 -0.00142NCI_DUAL_INCISION_REACTION_IN_TC_NER
-0.05003 -0.00227NCI_PAUSING_AND_RECOVERY_OF_TAT_MEDIATED_HIV_1_ELONGATION
-0.14953 -0.00063REACTOME_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.13480 -0.14836CORUM_RAD17-RFC_COMPLEX
-0.18544 -0.13581CORUM_NUA4/TIP60-HAT_COMPLEX_A
-0.00044 -0.14437REACTOME_G2_M_CHECKPOINTS
-0.04930 -0.16870MOOTHA_TCA
-0.09835 -0.00029NCI_FORMATION_OF_HIV_1_ELONGATION_COMPLEX_CONTAINING_HIV_1_TAT
-0.10764 -0.02081REACTOME_REGULATION_OF_APC_ACTIVATORS_BETWEEN_G1_S_AND_EARLY_ANAPHASE
-0.00483 -0.06946REACTOME_MRNA_3_END_PROCESSING
-0.03365 -0.02962MORI_PLASMA_CELL_UP
-0.00570 -0.03712REACTOME_GENE_EXPRESSION
-0.10221 -0.00021NCI_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_
-0.00001 -0.00357KEGG_PARKINSONS_DISEASE
-0.01126 -0.00251NCI_ELONGATION_OF_INTRON_CONTAINING_TRANSCRIPTS_AND_CO_TRANSCRIPTIONAL_MRNA_SPLICING
-0.19984 -0.18233CORUM_DYNACTIN_COMPLEX_DCTN1_DCTN2_DCTN3_DCTN4_DCTN6_CAPZA1_CAPZB_ACTR1A
-0.02240 -0.00411CORUM_RESPIRATORY_CHAIN_COMPLEX_I_BETA_SUBUNIT_MITOCHONDRIAL
-0.17314 -0.02372NCI_APC_C_MEDIATED_DEGRADATION_OF_CELL_CYCLE_PROTEINS
-0.12436 -0.01380CORUM_BRCA1-CORE_RNA_POLYMERASE_II_COMPLEX
-0.00252 -0.00027CORUM_39S_RIBOSOMAL_SUBUNIT_MITOCHONDRIAL
-0.01053 -0.03595NCI_APC_CDC20_MEDIATED_DEGRADATION_OF_NEK2A
-0.15752 -0.00250NCI_RNA_POLYMERASE_II_PROMOTER_ESCAPE
-0.02945 -0.05465DAIRKEE_TERT_TARGETS_UP
-0.00178 -0.00050MOOTHA_MITOCHONDRIA
-0.18957 -0.15231CORUM_RAP1_COMPLEX
-0.16707 -0.10180LEE_METASTASIS_AND_RNA_PROCESSING_UP
-0.10211 -0.00211NCI_ABORTIVE_ELONGATION_OF_HIV_1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.05111 -0.07787PENG_RAPAMYCIN_RESPONSE_DN
-0.09825 -0.07435NCI_CONVERSION_FROM_APC_C_CDC20_TO_APC_C_CDH1_IN_LATE_ANAPHASE
-0.12042 -0.09255BANDRES_RESPONSE_TO_CARMUSTIN_MGMT_48HR_UP
-0.04865 -0.00649CORUM_RESPIRATORY_CHAIN_COMPLEX_I_LAMBDA_SUBUNIT_MITOCHONDRIAL
-0.19597 -0.02655NCI_DUAL_INCISION_REACTION_IN_GG_NER
-0.11735 -0.07627REACTOME_RNA_POLYMERASE_III_TRANSCRIPTION
-0.17923 -0.03083NCI_FORMATION_OF_INCISION_COMPLEX_IN_GG_NER
-0.00676 -0.00102REACTOME_DUAL_INCISION_REACTION_IN_TC_NER
-0.17696 -0.17765AGUIRRE_PANCREATIC_CANCER_COPY_NUMBER_UP
-0.16580 -0.14381REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION
-0.00012 -0.09536BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP
-0.16442 -0.18549CORUM_SRCAP-ASSOCIATED_CHROMATIN_REMODELING_COMPLEX
-0.03184 -0.04171OUELLET_CULTURED_OVARIAN_CANCER_INVASIVE_VS_LMP_UP
-0.16288 -0.00253NCI_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT
-0.16667 -0.00258NCI_RNA_POLYMERASE_II_TRANSCRIPTION_INITIATION_AND_PROMOTER_CLEARANCE
-0.12603 -0.00030REACTOME_TRANSCRIPTION
-0.16173 -0.00244NCI_HIV_1_TRANSCRIPTION_PRE_INITIATION
-0.05126 -0.12019NCI_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING
-0.14270 -0.17780CORUM_60S_RIBOSOMAL_SUBUNIT_CYTOPLASMIC
-0.00484 -0.01084REACTOME_HIV_LIFE_CYCLE
-0.03000 -0.02245REACTOME_DUAL_INCISION_REACTION_IN_GG_NER
-0.16515 -0.00251NCI_TRANSCRIPTION_OF_THE_HIV_GENOME
-0.10772 -0.07878AGUIRRE_PANCREATIC_CANCER_COPY_NUMBER_DN