BICLUSTER_ID : DNREG-112
PATHOGENS /5/ : pseudomonas aeruginosa,escherichia coli,streptococcus pneumoniae,porphyromonas gingivalis,helicobacter pylori
TARGETS /4/ : HDAC1, GMPS, HADH, IDH1
Gene SetLeading Edge Genes
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UPCTCF, WRB, TOM1L1, TAF12, GMPS, BMI1, IDH1, TMED10, ANKMY2, DDX46, RPA3, CTR9, IGBP1
WONG EMBRYONIC STEM CELL COREHDAC1, RPA3, BUB1, HADH
LINDGREN BLADDER CANCER CLUSTER 3 UP
REACTOME CELL CYCLE MITOTICBUB1, ZWINT, CDC25C, ORC2L, CCNB1, AZI1, RPA3, RFC5, CENPF, KIF2C
BENPORATH MYC MAX TARGETS
BENPORATH CYCLING GENES
REACTOME CELL CYCLE CHECKPOINTS
RHODES UNDIFFERENTIATED CANCERFOXM1, RPA3, CCNB1
KUMAMOTO RESPONSE TO NUTLIN 3A DN
LEE EARLY T LYMPHOCYTE UPKIF2C, CCNB1
HORIUCHI WTAP TARGETS DN
MORI IMMATURE B LYMPHOCYTE DN
ODONNELL TARGETS OF MYC AND TFRC DN
TARTE PLASMA CELL VS PLASMABLAST DN
NCI PLK1 PATHWAY
MOLENAAR TARGETS OF CCND1 AND CDK4 DN
ZHAN MULTIPLE MYELOMA PR UP
REACTOME MITOTIC PROMETAPHASE
BUYTAERT PHOTODYNAMIC THERAPY STRESS DN
LASTOWSKA NEUROBLASTOMA COPY NUMBER DN
MARKEY RB1 ACUTE LOF DN
MANALO HYPOXIA DN
RICKMAN TUMOR DIFFERENTIATED WELL VS POORLY UP
BLUM RESPONSE TO SALIRASIB DNGPSM2, TOP2B, MIPEP, TMPO, RFC5, CENPF, STMN1
KAUFFMANN MELANOMA RELAPSE UP
RICKMAN METASTASIS UP
FINETTI BREAST CANCER BASAL VS LUMINAL
RODRIGUES THYROID CARCINOMA POORLY DIFFERENTIATED UP
WEST ADRENOCORTICAL TUMOR UP
YU MYC TARGETS UP
NCI MITOTIC PROMETAPHASEZWINT
KOBAYASHI EGFR SIGNALING 24HR DN
FERREIRA EWINGS SARCOMA UNSTABLE VS STABLE UP
CHIANG LIVER CANCER SUBCLASS UNANNOTATED DNUBE2E3, POLE3, MSH2, RPA3, TPX2, RFC5
ZHONG RESPONSE TO AZACITIDINE AND TSA DN
CHIANG LIVER CANCER SUBCLASS PROLIFERATION UPFOXM1, CCNB1
REACTOME G1 S TRANSITION
KINSEY TARGETS OF EWSR1 FLII FUSION UP
FOURNIER ACINAR DEVELOPMENT LATE 2
MORI LARGE PRE BII LYMPHOCYTE UP
PUJANA BRCA CENTERED NETWORK
FINETTI BREAST CANCER KINOME RED
CHANG CYCLING GENESFOXM1, CDC25C
MOREAUX MULTIPLE MYELOMA BY TACI DN
SHEDDEN LUNG CANCER POOR SURVIVAL A6
KAUFFMANN DNA REPAIR GENES
REACTOME DNA REPLICATION PRE INITIATION
MISSIAGLIA REGULATED BY METHYLATION DNFOXM1, ZWINT, CDC25C, RFC5, STMN1
SONG TARGETS OF IE86 CMV PROTEIN
MORI EMU MYC LYMPHOMA BY ONSET TIME UP
FUJII YBX1 TARGETS DN
BENPORATH PROLIFERATION
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
helicobacter pylori kx2 npgecpseudomonas aeruginosaporphyromonas gingivalisstreptococcus pneumoniae d39helicobacter pylori kx1 npgecescherichia coliGeneSet Name
-0.00489 -0.01279 -0.00366 -0.03975 -0.00733 -0.03431ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.01048 -0.00224 -0.00002 -0.09472 -0.00353 -0.00075WONG_EMBRYONIC_STEM_CELL_CORE
-0.00379 -0.01432 -0.02524 -0.04361 -0.00109 -0.00009LINDGREN_BLADDER_CANCER_CLUSTER_3_UP
-0.00105 -0.00096 -0.00002 -0.03832 -0.00054 -0.00008REACTOME_CELL_CYCLE_MITOTIC
-0.00219 -0.08688 -0.02655 -0.00995 -0.01238 -0.12362BENPORATH_MYC_MAX_TARGETS
-0.02705 -0.01705 -0.13199 -0.00237 -0.01003 -0.00035BENPORATH_CYCLING_GENES
-0.00003 -0.00423 -0.00004 -0.18352 -0.00086 -0.03627REACTOME_CELL_CYCLE_CHECKPOINTS
-0.00065 -0.02924 -0.00835 -0.05583 -0.00202 -0.01515RHODES_UNDIFFERENTIATED_CANCER
-0.04464 -0.07193 -0.07522 -0.14912 -0.08108 -0.00055KUMAMOTO_RESPONSE_TO_NUTLIN_3A_DN
-0.00132 -0.00995 -0.02965 -0.10536 -0.00370 -0.00002LEE_EARLY_T_LYMPHOCYTE_UP
-0.00220 -0.00235 -0.00150 -0.01609 -0.00232 -0.00204HORIUCHI_WTAP_TARGETS_DN
-0.02413 -0.07989 -0.02597 -0.00708 -0.00202 -0.00005MORI_IMMATURE_B_LYMPHOCYTE_DN
-0.08707 -0.09189 -0.02032 -0.12637 -0.02871 -0.00028ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN
-0.00337 -0.00025 -0.00195 -0.17367 -0.00391 -0.19268TARTE_PLASMA_CELL_VS_PLASMABLAST_DN
-0.00213 -0.01327 -0.04287 -0.02081 -0.01899 -0.00006NCI_PLK1_PATHWAY
-0.00059 -0.16096 -0.02688 -0.02179 -0.01373 -0.00017MOLENAAR_TARGETS_OF_CCND1_AND_CDK4_DN
-0.06073 -0.00283 -0.10560 -0.06787 -0.06738 -0.00002ZHAN_MULTIPLE_MYELOMA_PR_UP
-0.00148 -0.00072 -0.02038 -0.02070 -0.00233 -0.00002REACTOME_MITOTIC_PROMETAPHASE
-0.00546 -0.03826 -0.17539 -0.08622 -0.00339 -0.02439BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN
-0.05828 -0.11040 -0.00531 -0.08443 -0.02063 -0.04179LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN
-0.00537 -0.08917 -0.15592 -0.06105 -0.00100 -0.02897MARKEY_RB1_ACUTE_LOF_DN
-0.02679 -0.03027 -0.00004 -0.02142 -0.05884 -0.00285MANALO_HYPOXIA_DN
-0.04603 -0.00868 -0.07138 -0.15969 -0.03512 -0.05317RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_UP
-0.01232 -0.00107 -0.01336 -0.05952 -0.00297 -0.00015BLUM_RESPONSE_TO_SALIRASIB_DN
-0.00390 -0.00004 -0.09763 -0.02413 -0.01585 -0.00005KAUFFMANN_MELANOMA_RELAPSE_UP
-0.09744 -0.00225 -0.02769 -0.03433 -0.05493 -0.01546RICKMAN_METASTASIS_UP
-0.03351 -0.12915 -0.09172 -0.06359 -0.07930 -0.00339FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL
-0.01985 -0.00094 -0.01467 -0.00145 -0.02887 -0.01378RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP
-0.00769 -0.01510 -0.04057 -0.07686 -0.00298 -0.10340WEST_ADRENOCORTICAL_TUMOR_UP
-0.00132 -0.12022 -0.03945 -0.02289 -0.00084 -0.00179YU_MYC_TARGETS_UP
-0.00583 -0.00094 -0.02882 -0.02527 -0.00299 -0.00007NCI_MITOTIC_PROMETAPHASE
-0.04230 -0.08946 -0.00406 -0.07071 -0.00610 -0.00476KOBAYASHI_EGFR_SIGNALING_24HR_DN
-0.01181 -0.05357 -0.06682 -0.01917 -0.01555 -0.00253FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS_STABLE_UP
-0.00042 -0.00006 -0.00284 -0.02845 -0.00179 -0.01548CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN
-0.01265 -0.10608 -0.00819 -0.16660 -0.03620 -0.01151ZHONG_RESPONSE_TO_AZACITIDINE_AND_TSA_DN
-0.00492 -0.05367 -0.02565 -0.04353 -0.00105 -0.00060CHIANG_LIVER_CANCER_SUBCLASS_PROLIFERATION_UP
-0.00214 -0.05329 -0.00005 -0.18500 -0.00298 -0.15306REACTOME_G1_S_TRANSITION
-0.00192 -0.00097 -0.01136 -0.02023 -0.00330 -0.00210KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP
-0.00795 -0.11866 -0.00037 -0.14008 -0.00300 -0.09170FOURNIER_ACINAR_DEVELOPMENT_LATE_2
-0.01198 -0.02813 -0.03260 -0.00446 -0.01648 -0.00006MORI_LARGE_PRE_BII_LYMPHOCYTE_UP
-0.02243 -0.01365 -0.01278 -0.01894 -0.00614 -0.00007PUJANA_BRCA_CENTERED_NETWORK
-0.02908 -0.09937 -0.15753 -0.05476 -0.07132 -0.00394FINETTI_BREAST_CANCER_KINOME_RED
-0.00078 -0.01964 -0.02760 -0.11835 -0.00462 -0.00003CHANG_CYCLING_GENES
-0.10216 -0.01021 -0.00320 -0.00101 -0.04602 -0.02459MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.02761 -0.01610 -0.00219 -0.07798 -0.03282 -0.00959SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6
-0.09101 -0.04560 -0.03015 -0.01600 -0.06811 -0.00003KAUFFMANN_DNA_REPAIR_GENES
-0.00061 -0.08852 -0.00014 -0.14167 -0.00239 -0.19797REACTOME_DNA_REPLICATION_PRE_INITIATION
-0.00300 -0.00099 -0.00095 -0.11602 -0.00244 -0.00002MISSIAGLIA_REGULATED_BY_METHYLATION_DN
-0.08199 -0.13343 -0.04075 -0.02558 -0.00952 -0.00020SONG_TARGETS_OF_IE86_CMV_PROTEIN
-0.09503 -0.04215 -0.19698 -0.00067 -0.09524 -0.01552MORI_EMU_MYC_LYMPHOMA_BY_ONSET_TIME_UP
-0.01337 -0.02050 -0.11857 -0.00733 -0.00344 -0.00002FUJII_YBX1_TARGETS_DN
-0.00449 -0.00017 -0.02164 -0.00014 -0.00727 -0.00825BENPORATH_PROLIFERATION