BICLUSTER_ID : DNREG-114
PATHOGENS /4/ : aggregatibacter actinomycetemcomitans,bifidobacterium bifidum,yersinia enterocolitica,porphyromonas gingivalis
TARGETS /8/ : UQCRC1, ACAD8, AMD1, LMAN1, NDUFB6, NDUFAB1, NDUFB5, ACADM
Gene SetLeading Edge Genes
DIAZ CHRONIC MEYLOGENOUS LEUKEMIA UPCASP8AP2, MAGOH, CETN2, DBF4, ALG5, POLR2B, SS18, EI24, GALNT2, NDUFB5, UCHL5, POLR1D, DUSP11, ICT1, UBE2V2, UQCRC1, ATP5O, ACTR1A, EBAG9, SSBP1, DHCR24, KIF22, COPS3, NDUFAB1, RALBP1, DRG2, BUB3, LSM5, NFATC3, AMD1, LMAN1, RER1, CMAS, ACAA2, ACADM, HMGB1, SGPP1, AP2M1, NFE2, NUDT21, NFE2L2, SNRPB2, API5, CPOX, ACAD8, PRKRA, ADK, DHX9, DRG1, ITGAE, NDUFB6, ANP32A, DCTN6, H2AFV, ZMYND11, ARRB1
NCI RNA POLYMERASE III TRANSCRIPTION
NCI HIV 1 TRANSCRIPTION INITIATION
REACTOME TRANSCRIPTION OF THE HIV GENOME
NCI RNA POL II CTD PHOSPHORYLATION AND INTERACTION WITH CE
NCI RNA POL II CTD PHOSPHORYLATION AND INTERACTION WITH CE1
NCI TAT MEDIATED ELONGATION OF THE HIV 1 TRANSCRIPT
NCI PAUSING AND RECOVERY OF ELONGATION
NCI RNA POLYMERASE III CHAIN ELONGATION
REACTOME RNA POL II CTD PHOSPHORYLATION AND INTERACTION WITH CE
CORUM BRCA1-RNA POLYMERASE II COMPLEX
NCI RNA POLYMERASE II TRANSCRIPTION PRE INITIATION
REACTOME RNA POLYMERASE II TRANSCRIPTION
REACTOME NUCLEOTIDE EXCISION REPAIRPOLR2H, POLR2B, POLR2F, RPA3, MNAT1, POLR2J
REACTOME ABORTIVE ELONGATION OF HIV1 TRANSCRIPT IN THE ABSENCE OF TAT
CORUM C COMPLEX SPLICEOSOME
NCI HIV 1 ELONGATION ARREST AND RECOVERY
REACTOME RNA POLYMERASE I III AND MITOCHONDRIAL TRANSCRIPTION
NCI FORMATION OF THE HIV 1 EARLY ELONGATION COMPLEX
WONG MITOCHONDRIA GENE MODULE
CORUM RNA POLYMERASE II RNAPII
REACTOME TRANSCRIPTION COUPLED NERPOLR2H, POLR2B, POLR2F, RPA3, MNAT1, POLR2J
NCI MRNA CAPPING
KEGG RNA POLYMERASEPOLR2H, POLR2B, POLR2F, POLR2J
KEGG SPLICEOSOME
NCI RNA POLYMERASE II TRANSCRIPTION
REACTOME MRNA PROCESSING
NCI FORMATION OF THE EARLY ELONGATION COMPLEX
NCI RNA POLYMERASE II TRANSCRIPTION ELONGATION
STARK PREFRONTAL CORTEX 22Q11 DELETION DN
REACTOME VIRAL MESSENGER RNA SYNTHESIS
NCI HIV 1 TRANSCRIPTION ELONGATION
REACTOME HIV INFECTION
REACTOME TAT MEDIATED HIV1 ELONGATION ARREST AND RECOVERY
NCI DUAL INCISION REACTION IN TC NER
NCI PAUSING AND RECOVERY OF TAT MEDIATED HIV 1 ELONGATION
REACTOME FORMATION OF THE EARLY ELONGATION COMPLEX
NCI FORMATION OF HIV 1 ELONGATION COMPLEX CONTAINING HIV 1 TAT
REACTOME LATE PHASE OF HIV LIFE CYCLEPOLR2H, POLR2B, POLR2F, NUP37, TCEB2, MNAT1, POLR2J
RIZ ERYTHROID DIFFERENTIATION CCNE1
NCI ELONGATION ARREST AND RECOVERY
DING LUNG CANCER EXPRESSION BY COPY NUMBER
REACTOME GENE EXPRESSIONMAGOH, POLR2F, TCEB2, NUP37, POLR2L, DHX9, POLR2H, POLR2B, SF3B2, GTF2H1, SNRPD2, NUDT21, LSM2, MNAT1, POLR2J, SNRPB2
NCI TRANSCRIPTION COUPLED NER TC NER
NCI FORMATION OF RNA POL II ELONGATION COMPLEX
KEGG OXIDATIVE PHOSPHORYLATION
KEGG PARKINSONS DISEASE
SHEN SMARCA2 TARGETS UP
NCI ELONGATION OF INTRON CONTAINING TRANSCRIPTS AND CO TRANSCRIPTIONAL MRNA SPLICINGPOLR2H, POLR2B, POLR2F, HNRPA3, MNAT1, POLR2J
KEGG HUNTINGTONS DISEASE
CORUM RNA POLYMERASE II CORE COMPLEX
NCI FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX
REACTOME HIV1 TRANSCRIPTION INITIATION
REACTOME MICRORNA BIOGENESIS
CORUM BRCA1-CORE RNA POLYMERASE II COMPLEX
CORUM 39S RIBOSOMAL SUBUNIT MITOCHONDRIAL
NCI RNA POLYMERASE II PROMOTER ESCAPE
NCI ABORTIVE ELONGATION OF HIV 1 TRANSCRIPT IN THE ABSENCE OF TAT
NCI RNA POLYMERASE II TRANSCRIPTION INITIATION
REACTOME RNA POLYMERASE III CHAIN ELONGATION
NCI RNA POLYMERASE II HIV 1 PROMOTER ESCAPE
NCI PROCESSING OF CAPPED INTRON CONTAINING PRE MRNAPOLR2H, POLR2B, POLR2F, HNRPA3, POLR2J
CORUM RNASE/MRP COMPLEX
CORUM RNA POLYMERASE II HOLOENZYME COMPLEX
REACTOME HIV1 TRANSCRIPTION ELONGATION
REACTOME DUAL INCISION REACTION IN TC NER
MOREAUX MULTIPLE MYELOMA BY TACI DNSF3B2, C1QBP, LRRC40, BUB3, ANKRD49, LSM5, DBF4
NCI FORMATION AND MATURATION OF MRNA TRANSCRIPT
NCI RNA POLYMERASE II TRANSCRIPTION INITIATION AND PROMOTER CLEARANCE
REACTOME TRANSCRIPTIONTFB2M, MAGOH, POLR2F, TCEB2, POLR1D, MNAT1, POLR2J
NCI TAT MEDIATED HIV 1 ELONGATION ARREST AND RECOVERY
NCI PAUSING AND RECOVERY OF HIV 1 ELONGATION
NCI HIV 1 TRANSCRIPTION PRE INITIATION
REACTOME HIV LIFE CYCLEPOLR2F, NUP37, TCEB2, POLR2H, POLR2B, BANF1, POLR2J, MNAT1
NCI MICRORNA MIRNA BIOGENESIS
REACTOME FORMATION AND MATURATION OF MRNA TRANSCRIPTMAGOH, POLR2F, TCEB2, DHX9, POLR2H, POLR2B, SF3B2, POLR2J, MNAT1, NUDT21
NCI TRANSCRIPTION OF THE HIV GENOME
KEGG NUCLEOTIDE EXCISION REPAIR
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
yersinia enterocolitica p60 bl6bifidobacterium bifidumporphyromonas gingivalisaggregatibacter actinomycetemcomitansGeneSet Name
-0.08381 -0.00179 -0.01515 -0.03522DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP
-0.11376 -0.00272 -0.08393 -0.13927NCI_RNA_POLYMERASE_III_TRANSCRIPTION
-0.00227 -0.10797 -0.00288 -0.00228NCI_HIV_1_TRANSCRIPTION_INITIATION
-0.00019 -0.15904 -0.00132 -0.00567REACTOME_TRANSCRIPTION_OF_THE_HIV_GENOME
-0.00218 -0.01972 -0.02074 -0.00663NCI_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE
-0.00215 -0.01963 -0.02045 -0.00666NCI_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE1
-0.00105 -0.05645 -0.01124 -0.00570NCI_TAT_MEDIATED_ELONGATION_OF_THE_HIV_1_TRANSCRIPT
-0.00153 -0.12934 -0.02560 -0.03781NCI_PAUSING_AND_RECOVERY_OF_ELONGATION
-0.12281 -0.00225 -0.08357 -0.12863NCI_RNA_POLYMERASE_III_CHAIN_ELONGATION
-0.00150 -0.02460 -0.01147 -0.01969REACTOME_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE
-0.03314 -0.13906 -0.01133 -0.00562CORUM_BRCA1-RNA_POLYMERASE_II_COMPLEX
-0.00222 -0.11756 -0.00286 -0.00217NCI_RNA_POLYMERASE_II_TRANSCRIPTION_PRE_INITIATION
-0.00114 -0.01082 -0.00011 -0.00029REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION
-0.01259 -0.00004 -0.00069 -0.00561REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.00441 -0.00855 -0.00311 -0.00370REACTOME_ABORTIVE_ELONGATION_OF_HIV1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.07248 -0.00007 -0.00329 -0.14190CORUM_C_COMPLEX_SPLICEOSOME
-0.00158 -0.13256 -0.02492 -0.03938NCI_HIV_1_ELONGATION_ARREST_AND_RECOVERY
-0.07686 -0.00079 -0.02944 -0.19157REACTOME_RNA_POLYMERASE_I_III_AND_MITOCHONDRIAL_TRANSCRIPTION
-0.00217 -0.00444 -0.00519 -0.00084NCI_FORMATION_OF_THE_HIV_1_EARLY_ELONGATION_COMPLEX
-0.00045 -0.00930 -0.00002 -0.02845WONG_MITOCHONDRIA_GENE_MODULE
-0.04037 -0.03489 -0.07517 -0.00926CORUM_RNA_POLYMERASE_II_RNAPII
-0.00534 -0.00003 -0.00087 -0.00673REACTOME_TRANSCRIPTION_COUPLED_NER
-0.00218 -0.00908 -0.00988 -0.00364NCI_MRNA_CAPPING
-0.00605 -0.00104 -0.02723 -0.00474KEGG_RNA_POLYMERASE
-0.05069 -0.00291 -0.00004 -0.01022KEGG_SPLICEOSOME
-0.00224 -0.10952 -0.00321 -0.00227NCI_RNA_POLYMERASE_II_TRANSCRIPTION
-0.00216 -0.11775 -0.02152 -0.08380REACTOME_MRNA_PROCESSING
-0.00191 -0.00434 -0.00536 -0.00082NCI_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.00068 -0.04172 -0.00759 -0.01010NCI_RNA_POLYMERASE_II_TRANSCRIPTION_ELONGATION
-0.00198 -0.00785 -0.00014 -0.03107STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN
-0.01008 -0.01609 -0.02984 -0.00828REACTOME_VIRAL_MESSENGER_RNA_SYNTHESIS
-0.00221 -0.00484 -0.00555 -0.00086NCI_HIV_1_TRANSCRIPTION_ELONGATION
-0.00675 -0.10346 -0.00002 -0.00538REACTOME_HIV_INFECTION
-0.00146 -0.12118 -0.01834 -0.02602REACTOME_TAT_MEDIATED_HIV1_ELONGATION_ARREST_AND_RECOVERY
-0.00636 -0.10993 -0.00953 -0.03924NCI_DUAL_INCISION_REACTION_IN_TC_NER
-0.00200 -0.10372 -0.01803 -0.01167NCI_PAUSING_AND_RECOVERY_OF_TAT_MEDIATED_HIV_1_ELONGATION
-0.00145 -0.00700 -0.00452 -0.00214REACTOME_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.00042 -0.03232 -0.00557 -0.00413NCI_FORMATION_OF_HIV_1_ELONGATION_COMPLEX_CONTAINING_HIV_1_TAT
-0.01025 -0.00077 -0.00065 -0.04575REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE
-0.07357 -0.05165 -0.09281 -0.00930RIZ_ERYTHROID_DIFFERENTIATION_CCNE1
-0.00193 -0.12879 -0.02720 -0.03521NCI_ELONGATION_ARREST_AND_RECOVERY
-0.05518 -0.07736 -0.01809 -0.12832DING_LUNG_CANCER_EXPRESSION_BY_COPY_NUMBER
-0.18527 -0.00039 -0.00835 -0.04658REACTOME_GENE_EXPRESSION
-0.00566 -0.11001 -0.00965 -0.03700NCI_TRANSCRIPTION_COUPLED_NER__TC_NER_
-0.00046 -0.03789 -0.00840 -0.01134NCI_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_
-0.00184 -0.00289 -0.00288 -0.01268KEGG_OXIDATIVE_PHOSPHORYLATION
-0.00221 -0.01713 -0.00196 -0.01663KEGG_PARKINSONS_DISEASE
-0.02123 -0.19899 -0.05946 -0.02179SHEN_SMARCA2_TARGETS_UP
-0.00674 -0.00183 -0.00459 -0.01010NCI_ELONGATION_OF_INTRON_CONTAINING_TRANSCRIPTS_AND_CO_TRANSCRIPTIONAL_MRNA_SPLICING
-0.00022 -0.00740 -0.01132 -0.00352KEGG_HUNTINGTONS_DISEASE
-0.00698 -0.02452 -0.06622 -0.03463CORUM_RNA_POLYMERASE_II_CORE_COMPLEX
-0.00448 -0.11951 -0.00935 -0.04257NCI_FORMATION_OF_TRANSCRIPTION_COUPLED_NER__TC_NER__REPAIR_COMPLEX
-0.00236 -0.10901 -0.00322 -0.00226REACTOME_HIV1_TRANSCRIPTION_INITIATION
-0.00532 -0.00181 -0.06308 -0.02136REACTOME_MICRORNA_BIOGENESIS
-0.01570 -0.01355 -0.07827 -0.03688CORUM_BRCA1-CORE_RNA_POLYMERASE_II_COMPLEX
-0.00021 -0.01715 -0.00197 -0.07746CORUM_39S_RIBOSOMAL_SUBUNIT_MITOCHONDRIAL
-0.00235 -0.10869 -0.00305 -0.00232NCI_RNA_POLYMERASE_II_PROMOTER_ESCAPE
-0.00766 -0.00745 -0.00365 -0.00129NCI_ABORTIVE_ELONGATION_OF_HIV_1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.00226 -0.11013 -0.00283 -0.00217NCI_RNA_POLYMERASE_II_TRANSCRIPTION_INITIATION
-0.11420 -0.00239 -0.08389 -0.12980REACTOME_RNA_POLYMERASE_III_CHAIN_ELONGATION
-0.00229 -0.10967 -0.00310 -0.00215NCI_RNA_POLYMERASE_II_HIV_1_PROMOTER_ESCAPE
-0.01499 -0.00077 -0.00458 -0.01799NCI_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
-0.02800 -0.06701 -0.08455 -0.03892CORUM_RNASE/MRP_COMPLEX
-0.01583 -0.19491 -0.01040 -0.00428CORUM_RNA_POLYMERASE_II_HOLOENZYME_COMPLEX
-0.00043 -0.03851 -0.00449 -0.00851REACTOME_HIV1_TRANSCRIPTION_ELONGATION
-0.00548 -0.11668 -0.00955 -0.03902REACTOME_DUAL_INCISION_REACTION_IN_TC_NER
-0.07429 -0.00105 -0.00320 -0.01891MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.00220 -0.10636 -0.00291 -0.00222NCI_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT
-0.00224 -0.11008 -0.00282 -0.00224NCI_RNA_POLYMERASE_II_TRANSCRIPTION_INITIATION_AND_PROMOTER_CLEARANCE
-0.00229 -0.00087 -0.00082 -0.00380REACTOME_TRANSCRIPTION
-0.00159 -0.10685 -0.01998 -0.01179NCI_TAT_MEDIATED_HIV_1_ELONGATION_ARREST_AND_RECOVERY_
-0.00140 -0.12872 -0.02552 -0.03849NCI_PAUSING_AND_RECOVERY_OF_HIV_1_ELONGATION
-0.00236 -0.10634 -0.00277 -0.00226NCI_HIV_1_TRANSCRIPTION_PRE_INITIATION
-0.01423 -0.00038 -0.00047 -0.02230REACTOME_HIV_LIFE_CYCLE
-0.00596 -0.00706 -0.05276 -0.02017NCI_MICRORNA__MIRNA__BIOGENESIS
-0.00112 -0.00003 -0.00004 -0.00084REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT
-0.00229 -0.11471 -0.00303 -0.00257NCI_TRANSCRIPTION_OF_THE_HIV_GENOME
-0.07336 -0.00238 -0.00290 -0.04266KEGG_NUCLEOTIDE_EXCISION_REPAIR