BICLUSTER_ID : DNREG-120
PATHOGENS /4/ : aggregatibacter actinomycetemcomitans,lactobacillus acidophilus,mycobacterium tuberculosis,porphyromonas gingivalis
TARGETS /8/ : NDUFB7, NDUFA6, NDUFS6, NDUFA13, NDUFB6, NDUFAB1, NDUFA2, NDUFC1
Gene SetLeading Edge Genes
REACTOME ELECTRON TRANSPORT CHAINNDUFA6, NDUFB7, NDUFA13, NDUFS6, UQCRQ, NDUFB6, NDUFAB1, NDUFA2, NDUFC1
CORUM RESPIRATORY CHAIN COMPLEX I HOLOENZYME MITOCHONDRIALNDUFB6, NDUFB7, NDUFA13, NDUFA2
NAKAYAMA SOFT TISSUE TUMORS PCA2 UP
NCI TAT MEDIATED ELONGATION OF THE HIV 1 TRANSCRIPT
NCI TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRON CONTAINING TRANSCRIPT
PUJANA BRCA1 PCC NETWORK
REACTOME RNA POL II CTD PHOSPHORYLATION AND INTERACTION WITH CE
RHODES UNDIFFERENTIATED CANCERCDC20, H2AFX, ILF2, UBE2C, CCNA2, CCNB1, BIRC5
KUMAMOTO RESPONSE TO NUTLIN 3A DN
REACTOME REPAIR SYNTHESIS OF PATCH 27 30 BASES LONG BY DNA POLYMERASE
REACTOME RNA POLYMERASE II TRANSCRIPTION
NCI PLK1 PATHWAY
REACTOME NUCLEOTIDE EXCISION REPAIRPOLR2H, POLR2B, POLE, POLR2F, RPA3, MNAT1, POLR2J
REACTOME ABORTIVE ELONGATION OF HIV1 TRANSCRIPT IN THE ABSENCE OF TATPOLR2H, POLR2B, POLR2F, POLR2J
CORUM C COMPLEX SPLICEOSOME
MOREAUX B LYMPHOCYTE MATURATION BY TACI DN
NCI VIRAL MESSENGER RNA SYNTHESIS
REACTOME GLOBAL GENOMIC NER
NCI REPAIR SYNTHESIS FOR GAP FILLING BY DNA POLYMERASE IN TC NER
NCI FORMATION OF THE HIV 1 EARLY ELONGATION COMPLEXPOLR2H, POLR2F, MNAT1, POLR2J
REACTOME TRANSCRIPTION COUPLED NERPOLR2H, POLE, POLR2F, RPA3, MNAT1, POLR2J
REN BOUND BY E2FCBX5, MSH2, H2AFX, MLH1, CCNA2, TOP2A
KEGG SPLICEOSOME
KEGG RNA POLYMERASEPOLR2H, POLR2B, POLR3K, POLR2D, POLR2F, POLR2G, POLR2J
NCI MRNA CAPPING
NCI FORMATION OF THE EARLY ELONGATION COMPLEXPOLR2H, POLR2F, MNAT1, POLR2J
NCI MITOTIC PROMETAPHASE
NCI RNA POLYMERASE II TRANSCRIPTION ELONGATION
REACTOME VIRAL MESSENGER RNA SYNTHESIS
REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRON CONTAINING TRANSCRIPT
REACTOME METABOLISM OF RNA
TANG SENESCENCE TP53 TARGETS DN
REACTOME SYNTHESIS OF DNA
NCI HIV 1 TRANSCRIPTION ELONGATIONPOLR2H, POLR2F, MNAT1, POLR2J
NCI DUAL INCISION REACTION IN TC NER
REACTOME FORMATION OF THE EARLY ELONGATION COMPLEXPOLR2H, POLR2B, POLR2F, MNAT1, POLR2J
MOOTHA VOXPHOS
NCI FOXM1PATHWAY
NCI FORMATION OF HIV 1 ELONGATION COMPLEX CONTAINING HIV 1 TAT
CHEMNITZ RESPONSE TO PROSTAGLANDIN E2 UP
REACTOME LATE PHASE OF HIV LIFE CYCLEPOLR2F, RAE1, NUP37, TCEB2, GTF2A2, RANBP1, RAN, POLR2H, POLR2J, POLR2G, MNAT1
BENPORATH CYCLING GENES
CORUM RC COMPLEX REPLICATION COMPETENT COMPLEX
NCI TRANSCRIPTION COUPLED NER TC NER
CORUM RC COMPLEX DURING G2/M-PHASE OF CELL CYCLE
NCI FORMATION OF RNA POL II ELONGATION COMPLEX
NCI ELONGATION OF INTRON CONTAINING TRANSCRIPTS AND CO TRANSCRIPTIONAL MRNA SPLICINGPOLR2H, POLR2B, POLR2F, HNRPA3, RBMX, MNAT1, POLR2J
CORUM RNA POLYMERASE II CORE COMPLEX
NCI FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX
REACTOME MICRORNA BIOGENESIS
CORUM BRCA1-CORE RNA POLYMERASE II COMPLEX
NCI ABORTIVE ELONGATION OF HIV 1 TRANSCRIPT IN THE ABSENCE OF TATPOLR2H, POLR2B, POLR2F, POLR2J
STEIN ESRRA TARGETS RESPONSIVE TO ESTROGEN DN
FINETTI BREAST CANCER BASAL VS LUMINAL
NCI PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA
FERREIRA EWINGS SARCOMA UNSTABLE VS STABLE UP
CHIANG LIVER CANCER SUBCLASS UNANNOTATED DN
NCI REPAIR SYNTHESIS OF PATCH 27 30 BASES LONG BY DNA POLYMERASE
REACTOME S PHASE
GARGALOVIC RESPONSE TO OXIDIZED PHOSPHOLIPIDS TURQUOISE DN
KEGG CELL CYCLE
REACTOME HIV1 TRANSCRIPTION ELONGATION
REACTOME DUAL INCISION REACTION IN TC NER
FINETTI BREAST CANCER KINOME RED
CORUM CONDENSIN I COMPLEX
REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION
MOREAUX MULTIPLE MYELOMA BY TACI DN
RHODES CANCER META SIGNATURE
REACTOME HIV LIFE CYCLEPOLR2F, RAE1, NUP37, TCEB2, GTF2A2, RANBP1, RAN, POLR2H, BANF1, POLR2J, POLR2G, MNAT1
REACTOME TRANSLATION
CORUM 13S CONDENSIN COMPLEX
REACTOME MITOTIC M M G1 PHASESFBXO5, KIF20A, KIF18A, CDC20, BUB1, MLF1IP, NUP37, PLK1, CDCA8, KIF2C, CENPF, BIRC5, NDE1
NCI MICRORNA MIRNA BIOGENESIS
CORUM RC COMPLEX DURING S-PHASE OF CELL CYCLE
DODD NASOPHARYNGEAL CARCINOMA DN
KEGG NUCLEOTIDE EXCISION REPAIRPOLE, RPA3, MNAT1
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
lactobacillus acidophilusporphyromonas gingivalismycobacterium tuberculosisaggregatibacter actinomycetemcomitansGeneSet Name
-0.00013 -0.00001 -0.04570 -0.00157REACTOME_ELECTRON_TRANSPORT_CHAIN
-0.00004 -0.00037 -0.02035 -0.02967CORUM_RESPIRATORY_CHAIN_COMPLEX_I_HOLOENZYME_MITOCHONDRIAL
-0.00004 -0.12871 -0.01519 -0.01043NAKAYAMA_SOFT_TISSUE_TUMORS_PCA2_UP
-0.01390 -0.01124 -0.18908 -0.00570NCI_TAT_MEDIATED_ELONGATION_OF_THE_HIV_1_TRANSCRIPT
-0.00073 -0.02649 -0.03731 -0.00243NCI_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRON_CONTAINING_TRANSCRIPT
-0.00009 -0.02359 -0.12426 -0.12299PUJANA_BRCA1_PCC_NETWORK
-0.03335 -0.01147 -0.19532 -0.01969REACTOME_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE
-0.00080 -0.00835 -0.00660 -0.00010RHODES_UNDIFFERENTIATED_CANCER
-0.00892 -0.07522 -0.06205 -0.01855KUMAMOTO_RESPONSE_TO_NUTLIN_3A_DN
-0.00287 -0.10690 -0.00001 -0.12570REACTOME_REPAIR_SYNTHESIS_OF_PATCH_27_30_BASES_LONG_BY_DNA_POLYMERASE
-0.00169 -0.00011 -0.16804 -0.00029REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION
-0.00001 -0.04287 -0.00148 -0.09503NCI_PLK1_PATHWAY
-0.00033 -0.00069 -0.00034 -0.00561REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.00263 -0.00311 -0.05031 -0.00370REACTOME_ABORTIVE_ELONGATION_OF_HIV1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.00009 -0.00329 -0.01294 -0.14190CORUM_C_COMPLEX_SPLICEOSOME
-0.03986 -0.00539 -0.11011 -0.03024MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_DN
-0.00013 -0.00004 -0.10798 -0.00032NCI_VIRAL_MESSENGER_RNA_SYNTHESIS
-0.00101 -0.00963 -0.00003 -0.12872REACTOME_GLOBAL_GENOMIC_NER
-0.00254 -0.10445 -0.00004 -0.12874NCI_REPAIR_SYNTHESIS_FOR_GAP_FILLING_BY_DNA_POLYMERASE_IN_TC_NER
-0.00200 -0.00519 -0.03681 -0.00084NCI_FORMATION_OF_THE_HIV_1_EARLY_ELONGATION_COMPLEX
-0.00076 -0.00087 -0.00065 -0.00673REACTOME_TRANSCRIPTION_COUPLED_NER
-0.00002 -0.03123 -0.00002 -0.02215REN_BOUND_BY_E2F
-0.00194 -0.00004 -0.17443 -0.01022KEGG_SPLICEOSOME
-0.00168 -0.02723 -0.09151 -0.00474KEGG_RNA_POLYMERASE
-0.01397 -0.00988 -0.13473 -0.00364NCI_MRNA_CAPPING
-0.00230 -0.00536 -0.02665 -0.00082NCI_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.00003 -0.02882 -0.00003 -0.16560NCI_MITOTIC_PROMETAPHASE
-0.00937 -0.00759 -0.10821 -0.01010NCI_RNA_POLYMERASE_II_TRANSCRIPTION_ELONGATION
-0.01591 -0.02984 -0.17045 -0.00828REACTOME_VIRAL_MESSENGER_RNA_SYNTHESIS
-0.00008 -0.01562 -0.04551 -0.00687REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRON_CONTAINING_TRANSCRIPT
-0.00004 -0.00132 -0.05197 -0.17872REACTOME_METABOLISM_OF_RNA
-0.00887 -0.01342 -0.00123 -0.01024TANG_SENESCENCE_TP53_TARGETS_DN
-0.03098 -0.00002 -0.18874 -0.02170REACTOME_SYNTHESIS_OF_DNA
-0.00177 -0.00555 -0.02802 -0.00086NCI_HIV_1_TRANSCRIPTION_ELONGATION
-0.04224 -0.00953 -0.03560 -0.03924NCI_DUAL_INCISION_REACTION_IN_TC_NER
-0.00352 -0.00452 -0.02215 -0.00214REACTOME_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.00010 -0.00002 -0.19524 -0.00565MOOTHA_VOXPHOS
-0.00602 -0.04533 -0.10949 -0.06130NCI_FOXM1PATHWAY
-0.00869 -0.00557 -0.11867 -0.00413NCI_FORMATION_OF_HIV_1_ELONGATION_COMPLEX_CONTAINING_HIV_1_TAT
-0.00001 -0.02686 -0.00932 -0.12795CHEMNITZ_RESPONSE_TO_PROSTAGLANDIN_E2_UP
-0.00265 -0.00065 -0.05945 -0.04575REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE
-0.00012 -0.13199 -0.04552 -0.00307BENPORATH_CYCLING_GENES
-0.03570 -0.11393 -0.03846 -0.16397CORUM_RC_COMPLEX_REPLICATION_COMPETENT_COMPLEX
-0.04150 -0.00965 -0.03470 -0.03700NCI_TRANSCRIPTION_COUPLED_NER__TC_NER_
-0.00069 -0.02345 -0.00340 -0.00484CORUM_RC_COMPLEX_DURING_G2/M-PHASE_OF_CELL_CYCLE
-0.00959 -0.00840 -0.09980 -0.01134NCI_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_
-0.00308 -0.00459 -0.04820 -0.01010NCI_ELONGATION_OF_INTRON_CONTAINING_TRANSCRIPTS_AND_CO_TRANSCRIPTIONAL_MRNA_SPLICING
-0.00654 -0.06622 -0.09675 -0.03463CORUM_RNA_POLYMERASE_II_CORE_COMPLEX
-0.04376 -0.00935 -0.04537 -0.04257NCI_FORMATION_OF_TRANSCRIPTION_COUPLED_NER__TC_NER__REPAIR_COMPLEX
-0.00041 -0.06308 -0.02036 -0.02136REACTOME_MICRORNA_BIOGENESIS
-0.00634 -0.07827 -0.07164 -0.03688CORUM_BRCA1-CORE_RNA_POLYMERASE_II_COMPLEX
-0.00164 -0.00365 -0.03917 -0.00129NCI_ABORTIVE_ELONGATION_OF_HIV_1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.00078 -0.18586 -0.00090 -0.07201STEIN_ESRRA_TARGETS_RESPONSIVE_TO_ESTROGEN_DN
-0.00058 -0.09172 -0.00194 -0.01024FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL
-0.00512 -0.00458 -0.10453 -0.01799NCI_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
-0.00030 -0.06682 -0.00357 -0.00030FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS_STABLE_UP
-0.00561 -0.00284 -0.14510 -0.00039CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN
-0.00243 -0.10699 -0.00004 -0.12589NCI_REPAIR_SYNTHESIS_OF_PATCH__27_30_BASES_LONG__BY_DNA_POLYMERASE
-0.00260 -0.00004 -0.14471 -0.00982REACTOME_S_PHASE
-0.00008 -0.00002 -0.00193 -0.06733GARGALOVIC_RESPONSE_TO_OXIDIZED_PHOSPHOLIPIDS_TURQUOISE_DN
-0.00055 -0.10582 -0.06629 -0.19479KEGG_CELL_CYCLE
-0.01044 -0.00449 -0.10816 -0.00851REACTOME_HIV1_TRANSCRIPTION_ELONGATION
-0.04348 -0.00955 -0.04734 -0.03902REACTOME_DUAL_INCISION_REACTION_IN_TC_NER
-0.00052 -0.15753 -0.00240 -0.02729FINETTI_BREAST_CANCER_KINOME_RED
-0.07904 -0.13613 -0.14466 -0.07420CORUM_CONDENSIN_I_COMPLEX
-0.10996 -0.00289 -0.14497 -0.00005REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION
-0.01167 -0.00320 -0.00807 -0.01891MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.03156 -0.06689 -0.17263 -0.18769RHODES_CANCER_META_SIGNATURE
-0.00143 -0.00047 -0.04021 -0.02230REACTOME_HIV_LIFE_CYCLE
-0.17025 -0.06655 -0.19519 -0.00147REACTOME_TRANSLATION
-0.08485 -0.13215 -0.13959 -0.06972CORUM_13S_CONDENSIN_COMPLEX
-0.00004 -0.00012 -0.06598 -0.00853REACTOME_MITOTIC_M_M_G1_PHASES
-0.00152 -0.05276 -0.03469 -0.02017NCI_MICRORNA__MIRNA__BIOGENESIS
-0.00101 -0.06132 -0.01273 -0.09437CORUM_RC_COMPLEX_DURING_S-PHASE_OF_CELL_CYCLE
-0.00002 -0.02277 -0.17486 -0.07577DODD_NASOPHARYNGEAL_CARCINOMA_DN
-0.00448 -0.00290 -0.00038 -0.04266KEGG_NUCLEOTIDE_EXCISION_REPAIR