BICLUSTER_ID : DNREG-136
PATHOGENS /5/ : bifidobacterium bifidum,lactobacillus acidophilus,helicobacter pylori,ehrlichia chaffeensis,burkholderia pseudomallei
TARGETS /28/ : NNT, NDUFA13, KIF11, NDUFB8, HPRT1, SDHA, CDK4, IDH3G, PPIC, NDUFB5, NDUFS8, NDUFS1, SDHC, CYB5A, UQCRC1, NDUFS6, APEX1, PARP1, FADS1, IDH1, NDUFS2, GLO1, NDUFA4, NDUFB6, NDUFB2, SUCLG2, IDH3B, NDUFC1
Gene SetLeading Edge Genes
MOOTHA VOXPHOSNDUFA13, BCS1L, ATP5I, ATP5C1, UQCR, NDUFB8, SDHA, NDUFB5, NDUFS1, NDUFS8, CYC1, CYB5A, SDHC, UQCRC1, NDUFS6, MBD3, ATP5G1, ATP5J2, ATP5E, NDUFS2, NDUFB6, NDUFA4, NDUFB2, ATP5F1, NDUFC1
BORCZUK MALIGNANT MESOTHELIOMA UPBUB1B, KIF11, MAD2L1, PRDX4, HPRT1, PRPS2, CDK4, RAN, CCNG1, RFC4, DBI, FNTA, MSH6, PARP1, JTB, FADS1, GLO1, H2AFV, RPA1, SSR1
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UPSET, IFRD2, CETN2, DHX29, HTATSF1, SDF2L1, UCHL5, HSPA14, SDHC, MID1IP1, APEX1, MCM3, PDIA6, DDX46, PIGT, CNIH, SSR1, ARL2BP, HPRT1, SLC35B1, PPIC, GNPAT, CKAP4, RFC4, TMEM147, MCM4, NHP2L1, MSH6, EIF2B1, CDC20, PARP1, IDH1, PURA, ZMPSTE24, ACLY, PSME3, RPA1, XRCC6
REACTOME CITRIC ACID CYCLEIDH3G, CS, NNT, SUCLG2, IDH3B, SDHC, SDHA
KEGG STEROID BIOSYNTHESIS
NCI TRANSFORMATION OF LANOSTEROL TO CHOLESTEROL
WILCOX PRESPONSE TO ROGESTERONE UP
KEGG CITRATE CYCLE TCA CYCLE
NCI CITRIC ACID CYCLE TCA CYCLE
RAMALHO STEMNESS UP
REACTOME CELL CYCLE CHECKPOINTS
REACTOME ELECTRON TRANSPORT CHAIN
KEGG OXIDATIVE PHOSPHORYLATION
WAKASUGI HAVE ZNF143 BINDING SITES
KEGG PARKINSONS DISEASE
LY AGING OLD DN
KEGG HUNTINGTONS DISEASE
CAFFAREL RESPONSE TO THC DN
REACTOME INTEGRATION OF ENERGY METABOLISM
NCI APC C CDC20 MEDIATED DEGRADATION OF MITOTIC PROTEINS
REACTOME GLOBAL GENOMIC NER
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 10
WONG MITOCHONDRIA GENE MODULE
CORUM 39S RIBOSOMAL SUBUNIT MITOCHONDRIAL
KEGG PROPANOATE METABOLISM
NCI APC CDC20 MEDIATED DEGRADATION OF NEK2A
DAIRKEE TERT TARGETS UP
MOOTHA MITOCHONDRIA
LINDGREN BLADDER CANCER WITH LOH IN CHR9Q
REACTOME GLUCOSE REGULATION OF INSULIN SECRETION
RAMASWAMY METASTASIS UP
KEGG N GLYCAN BIOSYNTHESIS
WEST ADRENOCORTICAL TUMOR UP
SCHLOSSER MYC AND SERUM RESPONSE SYNERGY
REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING
KEGG MISMATCH REPAIR
IIZUKA LIVER CANCER PROGRESSION G1 G2 DN
DAIRKEE CANCER PRONE RESPONSE BPA
WELCSH BRCA1 TARGETS 1 DN
ACEVEDO NORMAL TISSUE ADJACENT TO LIVER TUMOR DN
KEGG BASE EXCISION REPAIR
REACTOME INACTIVATION OF APC VIA DIRECT INHIBITION OF THE APCOMPLEX
TOMLINS PROSTATE CANCER UP
NCI INACTIVATION OF APC C VIA DIRECT INHIBITION OF THE APC C COMPLEX
JEON SMAD6 TARGETS DN
NCI FORMATION OF ATP BY CHEMIOSMOTIC COUPLING
REACTOME SYNTHESIS OF DNA
KAAB HEART ATRIUM VS VENTRICLE DN
NCI REGULATION OF APC C ACTIVATORS BETWEEN G1 S AND EARLY ANAPHASE
KAUFFMANN DNA REPAIR GENES
REACTOME DNA REPLICATION PRE INITIATION
REACTOME TRANSFORMATION OF LANOSTEROL TO CHOLESTEROL
CAIRO HEPATOBLASTOMA UP
PODAR RESPONSE TO ADAPHOSTIN DN
STEIN ESR1 TARGETS
KEGG NUCLEOTIDE EXCISION REPAIR
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
burkholderia pseudomalleilactobacillus acidophilusbifidobacterium bifidumhelicobacter pylori kx1 npgecehrlichia chaffeensis libertyGeneSet Name
-0.00001 -0.00010 -0.00001 -0.00036 -0.00704MOOTHA_VOXPHOS
-0.00016 -0.00187 -0.00139 -0.00038 -0.08517BORCZUK_MALIGNANT_MESOTHELIOMA_UP
-0.00532 -0.00129 -0.00072 -0.00733 -0.17557ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.01561 -0.00100 -0.00019 -0.00062 -0.08753REACTOME_CITRIC_ACID_CYCLE
-0.09972 -0.00194 -0.14834 -0.13314 -0.00012KEGG_STEROID_BIOSYNTHESIS
-0.11862 -0.00124 -0.00385 -0.00148 -0.00025NCI_TRANSFORMATION_OF_LANOSTEROL_TO_CHOLESTEROL
-0.02750 -0.01815 -0.00264 -0.02611 -0.16956WILCOX_PRESPONSE_TO_ROGESTERONE_UP
-0.00078 -0.00041 -0.00004 -0.00044 -0.05789KEGG_CITRATE_CYCLE_TCA_CYCLE
-0.05466 -0.01423 -0.00447 -0.00232 -0.14602NCI_CITRIC_ACID_CYCLE__TCA_CYCLE_
-0.12653 -0.00058 -0.00314 -0.01531 -0.11352RAMALHO_STEMNESS_UP
-0.02029 -0.00613 -0.00026 -0.00086 -0.05832REACTOME_CELL_CYCLE_CHECKPOINTS
-0.00001 -0.00013 -0.00015 -0.00039 -0.02727REACTOME_ELECTRON_TRANSPORT_CHAIN
-0.00040 -0.02616 -0.00289 -0.00291 -0.05744KEGG_OXIDATIVE_PHOSPHORYLATION
-0.01482 -0.00168 -0.00163 -0.04323 -0.09953WAKASUGI_HAVE_ZNF143_BINDING_SITES
-0.00001 -0.06903 -0.01713 -0.00043 -0.11182KEGG_PARKINSONS_DISEASE
-0.00001 -0.00129 -0.00009 -0.02047 -0.10133LY_AGING_OLD_DN
-0.00796 -0.03486 -0.00740 -0.00043 -0.16087KEGG_HUNTINGTONS_DISEASE
-0.00117 -0.01395 -0.00190 -0.00243 -0.14121CAFFAREL_RESPONSE_TO_THC_DN
-0.00518 -0.03769 -0.02481 -0.00853 -0.19962REACTOME_INTEGRATION_OF_ENERGY_METABOLISM
-0.00947 -0.11114 -0.04166 -0.02086 -0.13475NCI_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS
-0.01224 -0.00101 -0.00003 -0.06173 -0.14181REACTOME_GLOBAL_GENOMIC_NER
-0.00205 -0.04785 -0.15181 -0.01346 -0.16767YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_10
-0.00046 -0.00183 -0.00930 -0.00100 -0.03542WONG_MITOCHONDRIA_GENE_MODULE
-0.00252 -0.00538 -0.01715 -0.00209 -0.00159CORUM_39S_RIBOSOMAL_SUBUNIT_MITOCHONDRIAL
-0.12766 -0.02277 -0.09374 -0.00444 -0.00135KEGG_PROPANOATE_METABOLISM
-0.01053 -0.05067 -0.01357 -0.01507 -0.09350NCI_APC_CDC20_MEDIATED_DEGRADATION_OF_NEK2A
-0.02945 -0.02032 -0.06198 -0.01232 -0.13845DAIRKEE_TERT_TARGETS_UP
-0.00178 -0.00039 -0.00104 -0.00294 -0.00150MOOTHA_MITOCHONDRIA
-0.08712 -0.04342 -0.01401 -0.06746 -0.19427LINDGREN_BLADDER_CANCER_WITH_LOH_IN_CHR9Q
-0.00096 -0.00063 -0.00038 -0.00233 -0.15647REACTOME_GLUCOSE_REGULATION_OF_INSULIN_SECRETION
-0.02146 -0.09461 -0.01728 -0.01300 -0.14669RAMASWAMY_METASTASIS_UP
-0.00386 -0.00334 -0.02164 -0.00059 -0.05815KEGG_N_GLYCAN_BIOSYNTHESIS
-0.00115 -0.00173 -0.00673 -0.00298 -0.00510WEST_ADRENOCORTICAL_TUMOR_UP
-0.00102 -0.00809 -0.01125 -0.11726 -0.07664SCHLOSSER_MYC_AND_SERUM_RESPONSE_SYNERGY
-0.05144 -0.08618 -0.00556 -0.00297 -0.11053REACTOME_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING
-0.00688 -0.00004 -0.00001 -0.06315 -0.05781KEGG_MISMATCH_REPAIR
-0.04402 -0.00574 -0.01848 -0.11692 -0.14186IIZUKA_LIVER_CANCER_PROGRESSION_G1_G2_DN
-0.00073 -0.00111 -0.00041 -0.10306 -0.11106DAIRKEE_CANCER_PRONE_RESPONSE_BPA
-0.00177 -0.00034 -0.00001 -0.03829 -0.10537WELCSH_BRCA1_TARGETS_1_DN
-0.10305 -0.06189 -0.12411 -0.01327 -0.01637ACEVEDO_NORMAL_TISSUE_ADJACENT_TO_LIVER_TUMOR_DN
-0.00205 -0.00130 -0.00058 -0.02953 -0.18700KEGG_BASE_EXCISION_REPAIR
-0.01448 -0.04943 -0.02271 -0.00671 -0.19225REACTOME_INACTIVATION_OF_APC_VIA_DIRECT_INHIBITION_OF_THE_APCOMPLEX
-0.16663 -0.13354 -0.01698 -0.01537 -0.09099TOMLINS_PROSTATE_CANCER_UP
-0.01195 -0.04969 -0.02067 -0.00776 -0.17548NCI_INACTIVATION_OF_APC_C_VIA_DIRECT_INHIBITION_OF_THE_APC_C_COMPLEX
-0.00740 -0.00003 -0.00006 -0.07564 -0.17573JEON_SMAD6_TARGETS_DN
-0.05126 -0.08124 -0.00693 -0.00007 -0.10869NCI_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING
-0.04929 -0.03098 -0.00140 -0.00059 -0.11584REACTOME_SYNTHESIS_OF_DNA
-0.15294 -0.00924 -0.11499 -0.01535 -0.10766KAAB_HEART_ATRIUM_VS_VENTRICLE_DN
-0.01297 -0.02258 -0.00242 -0.00012 -0.19876NCI_REGULATION_OF_APC_C_ACTIVATORS_BETWEEN_G1_S_AND_EARLY_ANAPHASE
-0.00140 -0.00009 -0.00001 -0.06811 -0.08733KAUFFMANN_DNA_REPAIR_GENES
-0.18352 -0.01571 -0.00189 -0.00239 -0.19897REACTOME_DNA_REPLICATION_PRE_INITIATION
-0.13439 -0.00068 -0.00352 -0.01616 -0.00039REACTOME_TRANSFORMATION_OF_LANOSTEROL_TO_CHOLESTEROL
-0.08891 -0.00997 -0.01014 -0.00296 -0.11184CAIRO_HEPATOBLASTOMA_UP
-0.01619 -0.12288 -0.06699 -0.11720 -0.17875PODAR_RESPONSE_TO_ADAPHOSTIN_DN
-0.05121 -0.01528 -0.00142 -0.11908 -0.11614STEIN_ESR1_TARGETS
-0.01443 -0.00448 -0.00238 -0.04356 -0.11031KEGG_NUCLEOTIDE_EXCISION_REPAIR