BICLUSTER_ID : DNREG-158
PATHOGENS /3/ : pseudomonas aeruginosa,aggregatibacter actinomycetemcomitans,streptococcus pneumoniae
TARGETS /21/ : HDAC1, SYK, KIF11, HMGCR, PPP2CA, AMD1, AURKA, PSMD1, CTSL2, CDC2, SPTLC1, TBCA, PSMB2, ACAT2, PPIG, UGDH, GSR, HDAC2, SLC36A1, SUCLA2, SDHD
Gene SetLeading Edge Genes
CAIRO HEPATOBLASTOMA CLASSES UPMTDH, COPS5, ILF2, BUB1, TMPO, DBF4, CCNB1, CCT3, CENPA, CTSL2, CDC2, TOP2A, CENPF, SEC23IP, GINS1, DDX1, DDX18, MSH2, ST13, TAF9, CKS2, USP10, SERBP1, BUB1B, KIF11, CDC27, MKI67, SPAG5, CCT6A, AMD1, TSR1, OIP5, AGPS, RPS6KB1, SSB, TPX2, KIF23, CDC25C, C18ORF10, RAD51AP1, XRCC5, ARFGEF1, HDAC2, SMC4, KIF2C, HMGB2
WEST ADRENOCORTICAL TUMOR UPHMGCR, POLE3, ZWINT, BUB1, TMPO, FGFR1OP, CCNB1, TXN, C14ORF1, CDC2, SPTLC1, PSMA3, SLC20A1, TOP2A, CENPF, UBE2V2, RAD23B, TAF9, KIF14, MELK, SLC36A1, PSMC6, LSM5, BUB1B, H2AFZ, RARS, CCT6A, FOXM1, PSMB7, ACTR2, WSB2, TXNDC9, ACAT2, TPX2, CDC25C, SMC4, KIF2C, HMGB2
SHEDDEN LUNG CANCER POOR SURVIVAL A6ZWINT, BUB1, DNM1L, DBF4, CCNB1, STMN1, CENPA, SLBP, CTSL2, CDC2, TOP2A, CENPF, UBE2V2, GINS1, ACP1, CDKN2C, KIF14, CKS2, TFDP1, C6ORF120, BUB1B, KIF11, CDC27, LMNB1, PSMA5, H2AFZ, SPAG5, PKP2, FOXM1, TSR1, OIP5, GPR37, NMU, KIF23, CDC25C, POLE2, HAT1, RAD51AP1, HDAC2, HMGB2
WONG EMBRYONIC STEM CELL COREHDAC1, BUB1, DBF4, FH, TOP2A, UBE2V2, CKS1B, ATP5O, DDX18, PDCD2, MSH2, RAD23B, UGDH, ATP5J, CKS2, AMOTL2, LSM5, BUB1B, KIF11, LMNB1, PSMA5, SPAG5, RPA3, ANP32E, SSB, KIF23, POLE2, DHX9, VBP1, XRCC5, SDHD, SMC4, RCN2, HMGB2
PUJANA BRCA2 PCC NETWORKBCAS2, BUB1, TMPO, DBF4, CCNB1, PAK2, STMN1, CENPA, CDC2, TOP2A, CENPF, GINS1, MSH2, CDKN2C, CYB5B, FRG1, KIF14, CKS2, TFDP1, DDX46, BUB1B, KIF11, CDC27, LMNB1, CASP6, MLH1, LARP7, SPAG5, FOXM1, NFYB, ASXL1, ACAT2, TPX2, KIF23, CDC25C, RAD51AP1, XRCC5, SMC4, KIF2C, HMGB2
LEE EARLY T LYMPHOCYTE UPGINS1, BUB1B, SYK, KIF11, MKI67, BUB1, CCNB1, CENPA, CKS2, RAD51AP1, CDC2, OIP5, TOP2A, KIF2C
GARY CD5 TARGETS DNCDC27, POLE3, ZWINT, FPGT, ATP6V1C1, CCNB1, RARS, CCT6A, AMD1, TIA1, BAG5, OIP5, CENPF, SEC23IP, SAP18, AP4S1, GINS1, API5, DDX1, DDX18, TXNDC9, PPIG, KIF23, CYB5B, UGDH, POLE2, DHX9, ANP32A, GTF2H1, SERBP1, PSMC6
KINSEY TARGETS OF EWSR1 FLII FUSION UPPPP1R7, MTDH, COPS5, POLE3, BUB1, ZWINT, TMPO, DBF4, CCNB1, PAK2, CENPA, SLBP, CDC2, BAG5, RCOR1, SLC20A1, TOP2A, CENPF, PPP2R5E, GINS1, ARPC5, DDX18, WRB, MSH2, ACP1, CYB5B, SRP54, DUS4L, KIF14, TFDP1, SERBP1, SUCLA2, CUL3, KIF11, LMNB1, APITD1, TCEB1, FOXM1, PKP2, TSR1, NFYB, C11ORF58, OIP5, ACTR2, SEPT10, TTF1, CUL1, KIF23, CDC25C, POLE2, GTF2A2, ANP32A, RAD51AP1, PRDX3, SMC4, SMAD4, HMGB2
REACTOME MITOTIC M M G1 PHASESBUB1B, APITD1, BUB1, ZWINT, PSMA5, PSMA2, PPP2CA, CENPA, PSMD1, PSMA4, PSMB7, CENPF, PSMB2, CLASP2, KIF23, KIF2C, PSMC6
REACTOME CELL CYCLE MITOTICBUB1B, APITD1, ANAPC10, CDC27, CETN2, ZWINT, BUB1, PSMA5, PSMA2, DBF4, CCNB1, PPP2CA, CENPA, PSMA4, PSMB7, RPA3, CENPF, PSMB2, GINS1, CKS1B, CLASP2, CUL1, CDC25C, DYNC1I2, KIF23, POLE2, TFDP1, PSMC6, KIF2C
ZHAN MULTIPLE MYELOMA PR UPKIF14, FOXM1, AURKA, TSR1, CDC2, TOP2A, CCNB1
RODRIGUES THYROID CARCINOMA POORLY DIFFERENTIATED UPZWINT, TMPO, DNM1L, PSMA2, DBF4, CCNB1, STMN1, CDC2, PSMA3, CENPF, UBE2V2, ABCD3, GINS1, STIL, ACP1, TAF9, GSR, KIF14, CKS2, CIT, LMNB1, TCEB1, H2AFZ, PSMA5, ATP6V1C1, CCT6A, RARS, ACTR2, SEPT10, MBNL1, DHX9, C18ORF10, RAD51AP1, HAT1, TUSC3, SMC4, HMGB2
MARTINEZ RESPONSE TO TRABECTEDIN DNKIF11, CDC27, PTPRK, RAD23B, BUB1, TMPO, CDC25C, PSMA5, RNF14, GTF2H1, PSMA4, HDAC2, TOP2A, RCOR1, PSMC6, PPP2R5E
CROONQUIST IL6 DEPRIVATION DNKIF11, MAD2L1, BUB1, ZWINT, CCNB1, CENPA, SPAG5, FOXM1, AURKA, OIP5, TOP2A, GINS1, STIL, POLE2, CKS2, SMC4, HMGB2
CHIANG LIVER CANCER SUBCLASS PROLIFERATION UPLMNB1, KIF11, ZWINT, KIF23, CCNB1, SLC7A7, FOXM1, RAD51AP1, HDAC2, OIP5, TOP2A, CENPF, HMGB2
ODONNELL TARGETS OF MYC AND TFRC DNBUB1B, CCNB1, DBF4, POLE2, FOXM1, CDC2, TOP2A, CENPF
GRAHAM NORMAL QUIESCENT VS NORMAL DIVIDING DNGINS1, KIF11, MSH2, MAD2L1, BUB1, ZWINT, POLE2, RAD51AP1, MELK, OIP5, TOP2A
MOREAUX B LYMPHOCYTE MATURATION BY TACI DNDDX1, TTRAP, CDC2, PRKDC, LSM5, SSBP1
CROONQUIST NRAS SIGNALING DNGINS1, BUB1B, KIF11, STIL, TPX2, ZWINT, CDC25C, CCNB1, CENPA, SPAG5, FOXM1, SMC4, OIP5, TOP2A, KIF2C, HMGB2
KANG DOXORUBICIN RESISTANCE UPGINS1, BUB1B, CDKN3, LMNB1, TPX2, BUB1, ZWINT, CENPA, FOXM1, RAD51AP1, CDC2, HMMR, OIP5, TOP2A, HMGB2
SCIBETTA KDM5B TARGETS DNAP4S1, BUB1B, CAV1, CCNB1, CDC2, SNRPG, OIP5, TOP2A, SWAP70
PUJANA XPRSS INT NETWORKRFC3, LMNB1, ZWINT, TMPO, RIF1, LARP7, STMN1, CENPA, DCP2, FOXM1, POLR2B, NFYB, HMMR, RECQL, PRKDC, TOP2A, ANP32E, TBCA, DEK, GINS1, EXOSC8, MSH2, MTF2, FRG1, UNG, TFDP1, DNAJC9, RAD51AP1, SMC4, PPP2R5C, HMGB2
GENTILE RESPONSE CLUSTER D3CKS2, GINS1, AMD1, KIF23, SCHIP1, SLC25A44, ZNF623
LEE LIVER CANCER SURVIVAL DNCKS2, HDAC2, KHDRBS1, CENPF, CCNB1, HMGB2, CCT6A
BLUM RESPONSE TO SALIRASIB DNBUB1B, KIF11, ZWINT, BUB1, TMPO, H2AFZ, RAB40B, GALNT1, SPAG5, STMN1, CENPA, MAPRE2, TIA1, NFYB, TOP2A, CENPF, ABCD3, STIL, MSH2, CDKN2C, KIF23, CDC25C, POLE2, DHX9, ANP32A, CKS2, TFDP1, SFRS7, RAD51AP1, PRDX3, MIPEP, LSM5
FINETTI BREAST CANCER KINOME REDAURKA, MELK, BUB1
AMUNDSON GAMMA RADIATION RESPONSEMAD2L1, BUB1, KIF23, CCNB1, CENPA, CKS2, AURKA, CENPF
FUJII YBX1 TARGETS DNLMNB1, KIF11, RAD23B, ZWINT, CDC25C, UNG, POLE2, DKK1, FOXM1, EI24
WAMUNYOKOLI OVARIAN CANCER LMP DN
GRAHAM CML DIVIDING VS NORMAL QUIESCENT UP
PUJANA BRCA1 PCC NETWORK
BOYAULT LIVER CANCER SUBCLASS G123 UP
REACTOME CELL CYCLE CHECKPOINTS
RHODES UNDIFFERENTIATED CANCERCKS1B, ILF2, KIF23, H2AFZ, CCNB1, SSBP1, CCT6A, CENPA, KIF14, CKS2, FOXM1, PSMB7, RPA3, TOP2A, KIF2C, HMGB2
KUMAMOTO RESPONSE TO NUTLIN 3A DNCKS2, CCNB1, CENPF, SPAG5
NCI AURORA B PATHWAY
NCI PHOSPHORYLATION OF THE APC C
TARTE PLASMA CELL VS PLASMABLAST DN
NCI PLK1 PATHWAY
MOLENAAR TARGETS OF CCND1 AND CDK4 DN
NUYTTEN EZH2 TARGETS DN
MARKEY RB1 ACUTE LOF DN
RODRIGUES THYROID CARCINOMA ANAPLASTIC UP
HOFFMANN LARGE TO SMALL PRE BII LYMPHOCYTE UP
REN BOUND BY E2FRFC3, MSH2, MLH1, H2AFZ, CENPA, RPA3, CENPE, TOP2A
WIKMAN ASBESTOS LUNG CANCER UP
NCI MITOTIC PROMETAPHASE
BOYAULT LIVER CANCER SUBCLASS G23 UP
STARK PREFRONTAL CORTEX 22Q11 DELETION DN
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UP
WANG LMO4 TARGETS DN
LAIHO COLORECTAL CANCER SERRATED UPRBM34, RPL36AL, NCOA4, IQGAP1, PRKAR1A
GINESTIER BREAST CANCER 20Q13 AMPLIFICATION UP
REACTOME DNA REPLICATION PRE INITIATION
GEORGES TARGETS OF MIR192 AND MIR215
REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA
LINDGREN BLADDER CANCER CLUSTER 3 UP
BENPORATH CYCLING GENES
REACTOME ELECTRON TRANSPORT CHAIN
MORI IMMATURE B LYMPHOCYTE DN
REACTOME MITOTIC PROMETAPHASE
NIKOLSKY BREAST CANCER 8Q12 Q22 AMPLICON
WANG LMO4 TARGETS UP
MANALO HYPOXIA DN
FINETTI BREAST CANCER BASAL VS LUMINAL
SPIELMAN LYMPHOBLAST EUROPEAN VS ASIAN DN
WANG CLIM2 TARGETS DN
YU MYC TARGETS UP
GOLDRATH HOMEOSTATIC PROLIFERATION
CHIANG LIVER CANCER SUBCLASS UNANNOTATED DNRFC3, CAPZA2, POLE3, MAD2L1, ILF2, DAD1, H2AFZ, PSMA5, PSMA2, SYPL1, SNX2, RPA3, MSH2, TM9SF2, TPX2, POLE2, VBP1, UBE2E3, RAD51AP1, HAT1, XRCC5, CNN3, RCN2
FERREIRA EWINGS SARCOMA UNSTABLE VS STABLE UPLMNB1, TMPO, KIF23, H2AFZ, CCNB1, DBF4, CENPE, TOP2A, CENPF, LSM5, HMGB2
NCI MRNA SPLICING MAJOR PATHWAY
REACTOME G1 S TRANSITION
BLALOCK ALZHEIMERS DISEASE DN
FOURNIER ACINAR DEVELOPMENT LATE 2
MORI LARGE PRE BII LYMPHOCYTE UP
CHANG CYCLING GENESLMNB1, ILF2, CDC25C, KIF23, CENPA, CKS2, FOXM1, MELK, TOP2A
CORUM SPLICEOSOME
NUYTTEN NIPP1 TARGETS DN
MOREAUX MULTIPLE MYELOMA BY TACI DN
FARMER BREAST CANCER CLUSTER 2
JI RESPONSE TO FSH DN
VANTVEER BREAST CANCER METASTASIS DN
MISSIAGLIA REGULATED BY METHYLATION DN
DODD NASOPHARYNGEAL CARCINOMA DN
BENPORATH PROLIFERATION
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
pseudomonas aeruginosastreptococcus pneumoniae d39aggregatibacter actinomycetemcomitansGeneSet Name
-0.00726 -0.10890 -0.00654CAIRO_HEPATOBLASTOMA_CLASSES_UP
-0.01510 -0.07686 -0.03574WEST_ADRENOCORTICAL_TUMOR_UP
-0.01610 -0.07798 -0.00025SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6
-0.00224 -0.09472 -0.00090WONG_EMBRYONIC_STEM_CELL_CORE
-0.00097 -0.01261 -0.02240PUJANA_BRCA2_PCC_NETWORK
-0.00995 -0.10536 -0.00008LEE_EARLY_T_LYMPHOCYTE_UP
-0.01258 -0.00609 -0.00636GARY_CD5_TARGETS_DN
-0.00097 -0.02023 -0.00655KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP
-0.00227 -0.03998 -0.00853REACTOME_MITOTIC_M_M_G1_PHASES
-0.00096 -0.03832 -0.01005REACTOME_CELL_CYCLE_MITOTIC
-0.00283 -0.06787 -0.00046ZHAN_MULTIPLE_MYELOMA_PR_UP
-0.00094 -0.00145 -0.00041RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP
-0.00098 -0.04630 -0.02048MARTINEZ_RESPONSE_TO_TRABECTEDIN_DN
-0.03272 -0.11829 -0.00045CROONQUIST_IL6_DEPRIVATION_DN
-0.05367 -0.04353 -0.00051CHIANG_LIVER_CANCER_SUBCLASS_PROLIFERATION_UP
-0.09189 -0.12637 -0.00563ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN
-0.01597 -0.04088 -0.00150GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_DN
-0.07235 -0.03950 -0.03024MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_DN
-0.00118 -0.14124 -0.00156CROONQUIST_NRAS_SIGNALING_DN
-0.02272 -0.03657 -0.00008KANG_DOXORUBICIN_RESISTANCE_UP
-0.02302 -0.01880 -0.04657SCIBETTA_KDM5B_TARGETS_DN
-0.00097 -0.00417 -0.00871PUJANA_XPRSS_INT_NETWORK
-0.00034 -0.13524 -0.00507GENTILE_RESPONSE_CLUSTER_D3
-0.00284 -0.07780 -0.00031LEE_LIVER_CANCER_SURVIVAL_DN
-0.00107 -0.05952 -0.00008BLUM_RESPONSE_TO_SALIRASIB_DN
-0.09937 -0.05476 -0.02729FINETTI_BREAST_CANCER_KINOME_RED
-0.00099 -0.04118 -0.00661AMUNDSON_GAMMA_RADIATION_RESPONSE
-0.02050 -0.00733 -0.00378FUJII_YBX1_TARGETS_DN
-0.05712 -0.09502 -0.15771WAMUNYOKOLI_OVARIAN_CANCER_LMP_DN
-0.18953 -0.04335 -0.00007GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP
-0.01546 -0.10265 -0.12299PUJANA_BRCA1_PCC_NETWORK
-0.01718 -0.06172 -0.18306BOYAULT_LIVER_CANCER_SUBCLASS_G123_UP
-0.00423 -0.18352 -0.02580REACTOME_CELL_CYCLE_CHECKPOINTS
-0.02924 -0.05583 -0.00010RHODES_UNDIFFERENTIATED_CANCER
-0.07193 -0.14912 -0.01855KUMAMOTO_RESPONSE_TO_NUTLIN_3A_DN
-0.00008 -0.18448 -0.00072NCI_AURORA_B_PATHWAY
-0.09607 -0.18366 -0.12590NCI_PHOSPHORYLATION_OF_THE_APC_C
-0.00025 -0.17367 -0.00685TARTE_PLASMA_CELL_VS_PLASMABLAST_DN
-0.01327 -0.02081 -0.09503NCI_PLK1_PATHWAY
-0.16096 -0.02179 -0.03509MOLENAAR_TARGETS_OF_CCND1_AND_CDK4_DN
-0.00115 -0.01919 -0.12376NUYTTEN_EZH2_TARGETS_DN
-0.08917 -0.06105 -0.00587MARKEY_RB1_ACUTE_LOF_DN
-0.16016 -0.01879 -0.02535RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP
-0.11187 -0.18584 -0.02363HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP
-0.00642 -0.15005 -0.02215REN_BOUND_BY_E2F
-0.05743 -0.12719 -0.07570WIKMAN_ASBESTOS_LUNG_CANCER_UP
-0.00094 -0.02527 -0.16560NCI_MITOTIC_PROMETAPHASE
-0.17995 -0.12725 -0.12897BOYAULT_LIVER_CANCER_SUBCLASS_G23_UP
-0.02880 -0.08271 -0.03107STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN
-0.01279 -0.03975 -0.07824ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.05681 -0.04096 -0.12313WANG_LMO4_TARGETS_DN
-0.03317 -0.05479 -0.01016LAIHO_COLORECTAL_CANCER_SERRATED_UP
-0.16257 -0.03937 -0.18386GINESTIER_BREAST_CANCER_20Q13_AMPLIFICATION_UP
-0.08852 -0.14167 -0.07063REACTOME_DNA_REPLICATION_PRE_INITIATION
-0.01016 -0.00046 -0.01128GEORGES_TARGETS_OF_MIR192_AND_MIR215
-0.17386 -0.05927 -0.00106REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
-0.01432 -0.04361 -0.00227LINDGREN_BLADDER_CANCER_CLUSTER_3_UP
-0.01705 -0.00237 -0.00307BENPORATH_CYCLING_GENES
-0.07078 -0.18395 -0.00157REACTOME_ELECTRON_TRANSPORT_CHAIN
-0.07989 -0.00708 -0.00118MORI_IMMATURE_B_LYMPHOCYTE_DN
-0.00072 -0.02070 -0.06546REACTOME_MITOTIC_PROMETAPHASE
-0.17257 -0.02934 -0.06190NIKOLSKY_BREAST_CANCER_8Q12_Q22_AMPLICON
-0.19470 -0.19334 -0.18761WANG_LMO4_TARGETS_UP
-0.03027 -0.02142 -0.09773MANALO_HYPOXIA_DN
-0.12915 -0.06359 -0.01024FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL
-0.00052 -0.02505 -0.07808SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_DN
-0.07350 -0.01899 -0.11194WANG_CLIM2_TARGETS_DN
-0.12022 -0.02289 -0.00022YU_MYC_TARGETS_UP
-0.18933 -0.00341 -0.08614GOLDRATH_HOMEOSTATIC_PROLIFERATION
-0.00006 -0.02845 -0.00039CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN
-0.05357 -0.01917 -0.00030FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS_STABLE_UP
-0.12422 -0.15699 -0.00014NCI_MRNA_SPLICING___MAJOR_PATHWAY
-0.05329 -0.18500 -0.01052REACTOME_G1_S_TRANSITION
-0.00026 -0.17586 -0.18332BLALOCK_ALZHEIMERS_DISEASE_DN
-0.11866 -0.14008 -0.07933FOURNIER_ACINAR_DEVELOPMENT_LATE_2
-0.02813 -0.00446 -0.04933MORI_LARGE_PRE_BII_LYMPHOCYTE_UP
-0.01964 -0.11835 -0.00321CHANG_CYCLING_GENES
-0.13655 -0.07735 -0.03713CORUM_SPLICEOSOME
-0.13346 -0.10034 -0.01043NUYTTEN_NIPP1_TARGETS_DN
-0.01021 -0.00101 -0.01891MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.00958 -0.01302 -0.00225FARMER_BREAST_CANCER_CLUSTER_2
-0.13119 -0.08972 -0.00693JI_RESPONSE_TO_FSH_DN
-0.00024 -0.04658 -0.06593VANTVEER_BREAST_CANCER_METASTASIS_DN
-0.00099 -0.11602 -0.07337MISSIAGLIA_REGULATED_BY_METHYLATION_DN
-0.00288 -0.01300 -0.07577DODD_NASOPHARYNGEAL_CARCINOMA_DN
-0.00017 -0.00014 -0.00048BENPORATH_PROLIFERATION