BICLUSTER_ID : <a href="#qvalue">DNREG-1586</a><BR>PATHOGENS /2/ : <a href="http://www.ebi.ac.uk/2can/genomes/bacteria/listeria monocytogenes.html">listeria monocytogenes</a>,<a href="http://www.ebi.ac.uk/2can/genomes/bacteria/yersinia enterocolitica.html">yersinia enterocolitica</a><BR>TARGETS /0/ : <BR>
<table border="1">
<tbody>
<tr><th width="300">Gene Set</th><th width="900">Leading Edge Genes</th></tr>
<tr><td><a href="http://www.broad.mit.edu/gsea/msigdb/cards/REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS">REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS</a></td><td>RFC3, RPA2, RAD17, ORC2L</td></tr>
<tr><td><a href="http://www.broad.mit.edu/gsea/msigdb/cards/ZHOU_INFLAMMATORY_RESPONSE_LIVE_DN">ZHOU INFLAMMATORY RESPONSE LIVE DN</a></td><td>RGS19, XPA, MRPL35, MLLT10, ANKMY2, TRIAP1, KLHDC3, ORC5L, COQ9, ICT1, LDLRAP1, USP2, HHEX, DGKZ, POP7, XPC, MRPL34, ARHGAP12, CCDC21, IMP3, STARD7</td></tr>
<tr><td><a href="http://www.broad.mit.edu/gsea/msigdb/cards/REACTOME_G2_M_CHECKPOINTS">REACTOME G2 M CHECKPOINTS</a></td><td>RPA2, RFC3, RAD17, ORC5L, ORC2L, RAD1</td></tr>
<tr><td><a href="http://www.broad.mit.edu/gsea/msigdb/cards/REACTOME_NUCLEOTIDE_EXCISION_REPAIR">REACTOME NUCLEOTIDE EXCISION REPAIR</a></td><td>RPA2, ERCC4, RFC3, XPC, RFC1, RPA3, ERCC5, POLR2I</td></tr>
<tr><td><a href="http://www.broad.mit.edu/gsea/msigdb/cards/REACTOME_TRANSCRIPTION_COUPLED_NER">REACTOME TRANSCRIPTION COUPLED NER</a></td><td>RPA2, ERCC4, RFC3, RFC1, RPA3, ERCC5, POLR2I</td></tr>
<tr><td><a href="http://www.broad.mit.edu/gsea/msigdb/cards/REACTOME_DNA_REPAIR">REACTOME DNA REPAIR</a></td><td>RPA2, ERCC4, RFC3, MPG, RFC1, XRCC1, POLR2I, NTHL1, XPC, RAD50, RPA3, ERCC5</td></tr>
<tr><td><a href="http://www.broad.mit.edu/gsea/msigdb/cards/ZHOU_INFLAMMATORY_RESPONSE_LPS_DN">ZHOU INFLAMMATORY RESPONSE LPS DN</a></td><td>RGS19, XPA, MRPL35, MLLT10, ANKMY2, TRIAP1, KLHDC3, ORC5L, COQ9, ICT1, LDLRAP1, USP2, HHEX, DGKZ, POP7, XPC, MRPL34, ARHGAP12, CCDC21, IMP3, STARD7</td></tr>
</tbody>
</table>
<table border="1"rules="all" VSPACE=10>
<tr><th colspan="12"<a name="qvalue">Color legend </a></th></tr>
<tr><th>q-value</th><th>-1</th><th>-0.2</th><th>-0.05</th><th>-0.01</th><th>-0.001</th><th>-0.0001</th></tr>
<tr><th>Color</th><td bgcolor="#ffffff" title="-1"></td><td bgcolor="#d9ef8b" title="-0.2"></td><td bgcolor="#a6d96a"
title="-0.05"></td><td bgcolor="#66bd63" title="-0.01"></td><td bgcolor="#1a9850" title="-0.001"></td><td title="-0.0001"
bgcolor="#006837"></td></tr>
</table>
<table border="1" VSPACE=0>
<table border="1" rules="all">
<caption align="top">TABLE OF Q-VALUES</caption>
<tbody>
<tr><th width="150">yersinia enterocolitica wap bc</th><th width="150">yersinia enterocolitica p60 bc</th><th width="150">listeria monocytogenes</th><th>GeneSet Name</th></tr>
<tr><td align="center" width="150" bgcolor="#d9ef8b"><font size=1> <span style="background-color:white">-0.10829</span></font></td><td align="center" width="150" bgcolor="#d9ef8b"><font size=1> <span style="background-color:white">-0.06137</span></font></td><td align="center" width="150" bgcolor="#a6d96a"><font size=1> <span style="background-color:white">-0.02206</span></font></td><td>REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS</td></tr>
<tr><td align="center" width="150" bgcolor="#d9ef8b"><font size=1> <span style="background-color:white">-0.11025</span></font></td><td align="center" width="150" bgcolor="#66bd63"><font size=1> <span style="background-color:white">-0.00167</span></font></td><td align="center" width="150" bgcolor="#a6d96a"><font size=1> <span style="background-color:white">-0.03110</span></font></td><td>ZHOU_INFLAMMATORY_RESPONSE_LIVE_DN</td></tr>
<tr><td align="center" width="150" bgcolor="#d9ef8b"><font size=1> <span style="background-color:white">-0.13918</span></font></td><td align="center" width="150" bgcolor="#d9ef8b"><font size=1> <span style="background-color:white">-0.14437</span></font></td><td align="center" width="150" bgcolor="#a6d96a"><font size=1> <span style="background-color:white">-0.02286</span></font></td><td>REACTOME_G2_M_CHECKPOINTS</td></tr>
<tr><td align="center" width="150" bgcolor="#d9ef8b"><font size=1> <span style="background-color:white">-0.09057</span></font></td><td align="center" width="150" bgcolor="#66bd63"><font size=1> <span style="background-color:white">-0.00115</span></font></td><td align="center" width="150" bgcolor="#a6d96a"><font size=1> <span style="background-color:white">-0.01266</span></font></td><td>REACTOME_NUCLEOTIDE_EXCISION_REPAIR</td></tr>
<tr><td align="center" width="150" bgcolor="#d9ef8b"><font size=1> <span style="background-color:white">-0.07207</span></font></td><td align="center" width="150" bgcolor="#66bd63"><font size=1> <span style="background-color:white">-0.00195</span></font></td><td align="center" width="150" bgcolor="#a6d96a"><font size=1> <span style="background-color:white">-0.02222</span></font></td><td>REACTOME_TRANSCRIPTION_COUPLED_NER</td></tr>
<tr><td align="center" width="150" bgcolor="#d9ef8b"><font size=1> <span style="background-color:white">-0.12785</span></font></td><td align="center" width="150" bgcolor="#a6d96a"><font size=1> <span style="background-color:white">-0.01104</span></font></td><td align="center" width="150" bgcolor="#a6d96a"><font size=1> <span style="background-color:white">-0.02224</span></font></td><td>REACTOME_DNA_REPAIR</td></tr>
<tr><td align="center" width="150" bgcolor="#d9ef8b"><font size=1> <span style="background-color:white">-0.10334</span></font></td><td align="center" width="150" bgcolor="#66bd63"><font size=1> <span style="background-color:white">-0.00194</span></font></td><td align="center" width="150" bgcolor="#a6d96a"><font size=1> <span style="background-color:white">-0.03057</span></font></td><td>ZHOU_INFLAMMATORY_RESPONSE_LPS_DN</td></tr>
</tbody>
</table>