BICLUSTER_ID : DNREG-168
PATHOGENS /4/ : staphylococcus aureus,helicobacter pylori,porphyromonas gingivalis,ehrlichia chaffeensis
TARGETS /40/ : SQLE, NDUFA3, CALM3, HSP90AB1, NDUFB8, GPX1, SDHA, CDK4, NDUFA1, NDUFS8, NSDHL, UQCRC1, PSMB5, NDUFS6, APEX1, ITGB4, GMPS, TUBB, NDUFS2, PREP, NDUFB2, NDUFS3, NDUFC1, SDHB, LDLR, PAPSS1, PARK7, PPP2CA, RRM1, NDUFA10, PSMB2, PSMD2, ACAT1, ACAT2, HADHA, IDH1, GLO1, NDUFB6, TUBB2C, HSD17B4
Gene SetLeading Edge Genes
KEGG OXIDATIVE PHOSPHORYLATIONATP5C1, SDHB, NDUFA3, ATP5G2, NDUFB8, NDUFA1, NDUFA10, NDUFS8, CYC1, ATP5O, UQCRC1, ATP5A1, NDUFS6, ATP5G1, NDUFS2, NDUFB6, COX8A, NDUFB2, COX7C, ATP5B, NDUFS3, NDUFC1
KEGG PARKINSONS DISEASESDHB, NDUFA3, ATP5G2, NDUFB8, PARK7, NDUFA1, NDUFA10, NDUFS8, CYC1, ATP5O, UQCRC1, NDUFS6, NDUFS2, NDUFB6, ATP5B, COX7C, NDUFS3, NDUFC1
KEGG HUNTINGTONS DISEASESDHB, NDUFA3, ATP5G2, NDUFB8, GPX1, NDUFA1, NDUFA10, NDUFS8, CYC1, POLR2J, ATP5O, UQCRC1, NDUFS6, AP2B1, NDUFS2, NDUFB6, ATP5B, COX7C, NDUFS3, NDUFC1
KEGG ALZHEIMERS DISEASESDHB, CALM3, NDUFA3, ATP5G2, NDUFB8, ADAM10, NDUFA1, NDUFA10, NDUFS8, CYC1, ATP5O, NDUFS6, APH1A, NDUFS2, NDUFB6, ATP5B, COX7C, NDUFS3, NDUFC1
CASORELLI ACUTE PROMYELOCYTIC LEUKEMIA DNSQLE, HSP90AB1, YBX1, SDHA, TM7SF2, GMPPB, STOM, CYC1, MRPL28, CTNNBL1, NSDHL, UQCRC1, MCM3, TUBB, GP1BB /// SEPT5, TUFM, BCAP31, EBP, CDC45L, ILKAP, PSMB6, RANGAP1, CMAS, COIL, ETFB, ACAT1, INSIG1, NUDT1, ACAT2, HADHA, CDC25C, GLO1, NUP93, MVD, LMAN2, GPSM2, TARDBP, IDI1, HSD17B4, STIP1, KIF2C, MGAT3, XRCC6
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UPIFRD2, ILF2, CSTF2, CETN2, HSP90AB1, COPE, DYNLRB1, DHX29, SDF2L1, SDF2, UFC1, HSPA14, PSMB5, APEX1, MCM3, GMPS, ACP1, SSR2, PIGT, HAX1, GPKOW, COPB2, SURF1, SERPINH1, PAPSS1, OXA1L, RFC4, NEDD8, UFM1, CUL2, PSMB2, NHP2L1, PSMD2, PSMD6, NUDT1, SFRS2, IDH1, TMCO3, APEX2, IDI1, TRAPPC4, MRPL48, TFG, XRCC6
BORCZUK MALIGNANT MESOTHELIOMA UPSCCPDH, COPS5, ILF2, HSP90AB1, PRPS2, PSMA2, CDK4, RAN, YKT6, NCBP2, PPP4C, AP2S1, MRPL28, DBI, FNTA, EMG1, ATP5A1, NDUFS2, BET1, SLC25A3, SDHB, PSMB6, PARK7, CCNG1, PSMB7, RFC4, PSMD2, DNAJA1, TPX2, NUDT1, GLO1, PGRMC1, H2AFV, DDOST, STIP1
REACTOME CELL CYCLE MITOTICKIF20A, PSMC5, SSNA1, CDK5RAP2, CETN2, PSMA2, DBF4, PSMB6, PPP2CA, CDK4, RANGAP1, PSMD11, PSMB7, PSMD4, RFC4, ANAPC5, RFC5, CENPF, NUP85, MNAT1, PSMD14, PSMB2, PSMD2, MCM3, PSMB5, PSMD6, TUBB, PSMD12, PSMB3, KNTC1, KIF2C
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 14SERPINH1, APEX1, PSMB5, PSMD6, HDLBP, SMYD2, SSR2, CDK4, PDIA4, SNRPD3, PREP, SEC61A1, LMAN2, BANF1
REACTOME S PHASEPSMC5, PSMA2, PSMB6, PSMC3, CDK4, PSMD11, PSMB7, RFC4, PSMD4, CCNA2, RFC5, MNAT1, PSMB2, PSMD2, PSMB5, MCM3, PSMD6, PSMD3, PSMD12, PSMB3
MISSIAGLIA REGULATED BY METHYLATION DNITGB4, GMPS, ACAT2, STMN1, CBARA1, NDUFS3, RFC5, KNTC1, EBP
REACTOME CELL CYCLE CHECKPOINTSPSMC5, PSMA2, PSMB6, PSMD11, PSMB7, RFC4, PSMD4, ANAPC5, RFC5, PSMD14, PSMB2, PSMB5, MCM3, PSMD2, PSMD6, PSMD3, PSMD12, CDC25C, PSMB3
BIDUS METASTASIS UPSQLE, YBX1, DBF4, PPP2CA, BCL7A, CENPA, RRM1, CKAP5, PBK, NCBP2, RFC4, HMGB3, PCBP1, RFC5, CENPF, RAE1, TPX2, SFRS2, TARDBP
FOURNIER ACINAR DEVELOPMENT LATE 2SQLE, RAI14, POLE3, LDLR, CLPB, CDC45L, UCHL5, PTPLAD1, COL4A2, NUP85, CDCA3, PSMB2, MCM3, TUBG1, PITRM1, TIPIN, PRDX3, H2AFV, IDI1, KIF2C, NT5DC2, HMBS
REACTOME SYNTHESIS OF DNAPSMC5, PSMA2, PSMB6, PSMC3, PSMD11, PSMB7, PSMD4, RFC4, CCNA2, RFC5, PSMB2, PSMB5, MCM3, PSMD2, PSMD6, PSMD12, PSMB3
REACTOME DNA REPLICATION PRE INITIATIONPSMC5, PSMA2, PSMB6, DBF4, PSMC3, PSMD11, PSMB7, PSMD4, PSMD14, PSMB2, PSMB5, MCM3, PSMD2, PSMD6, PSMD3, PSMD12, PSMB3
KOBAYASHI EGFR SIGNALING 24HR DNCDC45L, RANGAP1, PBK, HMMR, RFC5, CDCA3, HSPA14, EZH2, MCM3, TUBG1, TUBB, TPX2, TIPIN, TUBB2C, GPSM2, POLR3K, PRC1, TUBB6, KIF2C
WHITEFORD PEDIATRIC CANCER MARKERSRFC4, ILF2, NUDT1, CENPF, CDK4, STMN1
PELLICCIOTTA HDAC IN ANTIGEN PRESENTATION UPPSMD2, PSMD6, COPE, PDIA4, YIPF5, PSMB7, PSMD4, PSMB3, TRAPPC4, COPZ1, COPB2, BCAP31
SOTIRIOU BREAST CANCER GRADE 1 VS 3 UPKIF20A, CDC45L, STMN1, MRPL15, HMMR, CDCA3, EZH2, MCM3, CDC20, GMPS, NUDT1, PSMD12, PFDN6, NUP93, TACC3, PRC1, STIP1
KEGG STEROID BIOSYNTHESIS
LI WILMS TUMOR VS FETAL KIDNEY 1 DN
MITSIADES RESPONSE TO APLIDIN DN
RAMALHO STEMNESS UP
MORI IMMATURE B LYMPHOCYTE DN
REACTOME TELOMERE MAINTENANCE
MOLENAAR TARGETS OF CCND1 AND CDK4 DN
ZHAN MULTIPLE MYELOMA PR UP
SCHUHMACHER MYC TARGETS UP
REACTOME INTEGRATION OF ENERGY METABOLISM
MOREAUX B LYMPHOCYTE MATURATION BY TACI DN
REACTOME GLOBAL GENOMIC NER
LASTOWSKA NEUROBLASTOMA COPY NUMBER DN
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 10
REACTOME DNA STRAND ELONGATION
TOYOTA TARGETS OF MIR34B AND MIR34C
CORUM 39S RIBOSOMAL SUBUNIT MITOCHONDRIALMRPL34, MRPL16, MRPL46, MRPL28, MRPL35
DAIRKEE TERT TARGETS UP
MANALO HYPOXIA DN
MOOTHA FFA OXYDATION
REACTOME EXTENSION OF TELOMERES
RICKMAN TUMOR DIFFERENTIATED MODERATELY VS POORLY DN
RICKMAN METASTASIS UP
REN BOUND BY E2F
REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS
WEST ADRENOCORTICAL TUMOR UP
CROONQUIST NRAS SIGNALING DN
CORUM 55S RIBOSOME MITOCHONDRIALMRPS7, MRPS16, MRPS12, MRPS11, MRPL35, DAP3, MRPL15, MRPL16, MRPL34, MRPL46, MRPL28
NCI ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS
WEI MYCN TARGETS WITH E BOX
REACTOME DNA REPAIR
ZHANG RESPONSE TO CANTHARIDIN DN
ACEVEDO NORMAL TISSUE ADJACENT TO LIVER TUMOR DN
CORUM 28S RIBOSOMAL SUBUNIT MITOCHONDRIAL
RHODES CANCER META SIGNATURE
SHEDDEN LUNG CANCER POOR SURVIVAL A6
KAUFFMANN DNA REPAIR GENES
AMUNDSON GAMMA RADIATION RESPONSE
RICKMAN TUMOR DIFFERENTIATED MODERATELY VS POORLY UP
FUJII YBX1 TARGETS DN
REACTOME G2 M CHECKPOINTS
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
staphylococcus aureusporphyromonas gingivalishelicobacter pylori kx1 npgecehrlichia chaffeensis libertyGeneSet Name
-0.00014 -0.00288 -0.00291 -0.05744KEGG_OXIDATIVE_PHOSPHORYLATION
-0.00034 -0.00196 -0.00043 -0.11182KEGG_PARKINSONS_DISEASE
-0.00320 -0.01132 -0.00043 -0.16087KEGG_HUNTINGTONS_DISEASE
-0.01796 -0.01096 -0.00047 -0.19611KEGG_ALZHEIMERS_DISEASE
-0.00290 -0.00446 -0.00349 -0.12436CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_DN
-0.00628 -0.00366 -0.00733 -0.17557ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.00005 -0.00191 -0.00038 -0.08517BORCZUK_MALIGNANT_MESOTHELIOMA_UP
-0.01121 -0.00002 -0.00054 -0.14637REACTOME_CELL_CYCLE_MITOTIC
-0.00091 -0.00019 -0.00074 -0.08312YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_14
-0.00011 -0.00004 -0.00088 -0.16739REACTOME_S_PHASE
-0.01077 -0.00095 -0.00244 -0.08244MISSIAGLIA_REGULATED_BY_METHYLATION_DN
-0.00010 -0.00004 -0.00086 -0.05832REACTOME_CELL_CYCLE_CHECKPOINTS
-0.00266 -0.03629 -0.00728 -0.12771BIDUS_METASTASIS_UP
-0.00173 -0.00037 -0.00300 -0.02119FOURNIER_ACINAR_DEVELOPMENT_LATE_2
-0.00014 -0.00002 -0.00059 -0.11584REACTOME_SYNTHESIS_OF_DNA
-0.00420 -0.00014 -0.00239 -0.19897REACTOME_DNA_REPLICATION_PRE_INITIATION
-0.00470 -0.00406 -0.00610 -0.16719KOBAYASHI_EGFR_SIGNALING_24HR_DN
-0.00027 -0.02713 -0.00303 -0.11563WHITEFORD_PEDIATRIC_CANCER_MARKERS
-0.01422 -0.03570 -0.00027 -0.16078PELLICCIOTTA_HDAC_IN_ANTIGEN_PRESENTATION_UP
-0.00001 -0.00005 -0.00041 -0.10983SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP
-0.15098 -0.15823 -0.13314 -0.00012KEGG_STEROID_BIOSYNTHESIS
-0.09147 -0.18322 -0.01328 -0.12543LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN
-0.00224 -0.02682 -0.00925 -0.08816MITSIADES_RESPONSE_TO_APLIDIN_DN
-0.01055 -0.03607 -0.01531 -0.11352RAMALHO_STEMNESS_UP
-0.11163 -0.02597 -0.00202 -0.07682MORI_IMMATURE_B_LYMPHOCYTE_DN
-0.06646 -0.04272 -0.01607 -0.05461REACTOME_TELOMERE_MAINTENANCE
-0.08972 -0.02688 -0.01373 -0.08292MOLENAAR_TARGETS_OF_CCND1_AND_CDK4_DN
-0.19936 -0.10560 -0.06738 -0.12250ZHAN_MULTIPLE_MYELOMA_PR_UP
-0.02687 -0.02335 -0.06234 -0.17991SCHUHMACHER_MYC_TARGETS_UP
-0.00301 -0.09551 -0.00853 -0.19962REACTOME_INTEGRATION_OF_ENERGY_METABOLISM
-0.00074 -0.00539 -0.03248 -0.03538MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_DN
-0.14825 -0.00963 -0.06173 -0.14181REACTOME_GLOBAL_GENOMIC_NER
-0.08375 -0.00531 -0.02063 -0.13498LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN
-0.00041 -0.01436 -0.01346 -0.16767YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_10
-0.04971 -0.01190 -0.03689 -0.02104REACTOME_DNA_STRAND_ELONGATION
-0.11217 -0.08221 -0.02530 -0.17694TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C
-0.01119 -0.00197 -0.00209 -0.00159CORUM_39S_RIBOSOMAL_SUBUNIT_MITOCHONDRIAL
-0.03442 -0.00004 -0.01232 -0.13845DAIRKEE_TERT_TARGETS_UP
-0.00136 -0.00004 -0.05884 -0.00680MANALO_HYPOXIA_DN
-0.15207 -0.11974 -0.00080 -0.00063MOOTHA_FFA_OXYDATION
-0.14338 -0.04101 -0.03806 -0.12466REACTOME_EXTENSION_OF_TELOMERES
-0.05196 -0.00533 -0.19171 -0.19117RICKMAN_TUMOR_DIFFERENTIATED_MODERATELY_VS_POORLY_DN
-0.09474 -0.02769 -0.05493 -0.17550RICKMAN_METASTASIS_UP
-0.01841 -0.03123 -0.01817 -0.08737REN_BOUND_BY_E2F
-0.08541 -0.10564 -0.17124 -0.00432REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS
-0.00049 -0.04057 -0.00298 -0.00510WEST_ADRENOCORTICAL_TUMOR_UP
-0.00461 -0.04603 -0.00331 -0.17610CROONQUIST_NRAS_SIGNALING_DN
-0.00036 -0.00004 -0.00234 -0.00012CORUM_55S_RIBOSOME_MITOCHONDRIAL
-0.06912 -0.08676 -0.06478 -0.00865NCI_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS
-0.04063 -0.00804 -0.05065 -0.19281WEI_MYCN_TARGETS_WITH_E_BOX
-0.05043 -0.00081 -0.04418 -0.10973REACTOME_DNA_REPAIR
-0.00142 -0.07046 -0.05914 -0.07561ZHANG_RESPONSE_TO_CANTHARIDIN_DN
-0.18244 -0.03871 -0.01327 -0.01637ACEVEDO_NORMAL_TISSUE_ADJACENT_TO_LIVER_TUMOR_DN
-0.04839 -0.00279 -0.02531 -0.04573CORUM_28S_RIBOSOMAL_SUBUNIT_MITOCHONDRIAL
-0.01707 -0.06689 -0.03118 -0.08287RHODES_CANCER_META_SIGNATURE
-0.00265 -0.00219 -0.03282 -0.14253SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6
-0.11135 -0.03015 -0.06811 -0.08733KAUFFMANN_DNA_REPAIR_GENES
-0.08951 -0.00349 -0.00300 -0.18224AMUNDSON_GAMMA_RADIATION_RESPONSE
-0.04323 -0.00488 -0.19142 -0.19186RICKMAN_TUMOR_DIFFERENTIATED_MODERATELY_VS_POORLY_UP
-0.12728 -0.11857 -0.00344 -0.05731FUJII_YBX1_TARGETS_DN
-0.04680 -0.05896 -0.14113 -0.00372REACTOME_G2_M_CHECKPOINTS