BICLUSTER_ID : DNREG-174
PATHOGENS /4/ : pseudomonas aeruginosa,bifidobacterium bifidum,lactobacillus acidophilus,burkholderia pseudomallei
TARGETS /18/ : CAD, MTHFD1, NDUFB8, CSNK1G2, AHCY, SRM, AURKA, SLC1A5, ATIC, NDUFS8, NDUFA2, UQCRC1, NDUFB7, APRT, HAGH, PEBP1, LIG1, FASN
Gene SetLeading Edge Genes
SPIELMAN LYMPHOBLAST EUROPEAN VS ASIAN UPPCK2, DEAF1, NDUFB8, AHCY, CSNK1G2, MRPL23, AURKA, NDUFS8, TOP2A, CENPF, DBI, NDUFB7, UQCRC1, APRT, STIM1, HAGH, MBD3, UBE2C, PEBP1, ATP5J2, RPS8, LSM4, ARHGAP1, DUS1L, NDUFB11, HMBS, EBP, MACF1, ATPIF1, NENF, H2AFX, NDUFA2, PGLS, FKBP2, CDC20, SNRPD1, UQCRQ, H2AFV
WELCSH BRCA1 TARGETS 1 DNCCNE1, ALG3, CAD, SLC19A1, MTHFD1, EIF4G1, SRM, SF3B2, SSRP1, SLC1A5, ATIC, FASN, POLD1
REACTOME TRANSCRIPTION COUPLED NERPOLR2L, POLE2, POLR2H, LIG1, RFC4, RPA1, RPA3, POLD1
LOPEZ MESOTELIOMA SURVIVAL TIME UP
GRADE COLON CANCER UP
CORUM RESPIRATORY CHAIN COMPLEX I INCOMPLETE INTERMEDIATE MITOCHONDRIAL
MONTERO THYROID CANCER POOR SURVIVAL UP
KUMAMOTO RESPONSE TO NUTLIN 3A DN
CORUM 18S U11/U12 SNRNP
NCI TRANSCRIPTION COUPLED NER TC NER
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 13
KEGG PARKINSONS DISEASE
PRAMOONJAGO SOX4 TARGETS DN
REACTOME NUCLEOTIDE EXCISION REPAIR
KEGG HUNTINGTONS DISEASE
CORUM RESPIRATORY CHAIN COMPLEX I BETA SUBUNIT MITOCHONDRIAL
CORUM F1F0-ATP SYNTHASE EC 3.6.3.14 MITOCHONDRIAL
REACTOME INTEGRATION OF ENERGY METABOLISM
CORUM RNA POLYMERASE II CORE COMPLEX
MODY HIPPOCAMPUS PRENATAL
NCI FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX
CORUM BRCA1-CORE RNA POLYMERASE II COMPLEX
WONG MITOCHONDRIA GENE MODULE
NCI DNA REPLICATION
REACTOME DIABETES PATHWAYS
MOOTHA MITOCHONDRIA
LUI THYROID CANCER CLUSTER 3
REACTOME G2 M TRANSITION
REACTOME GLUCOSE REGULATION OF INSULIN SECRETION
CHEN HOXA5 TARGETS 9HR DN
POMEROY MEDULLOBLASTOMA PROGNOSIS DN
MULLIGHAN MLL SIGNATURE 2 UP
REACTOME REGULATION OF INSULIN SECRETION
MORI MATURE B LYMPHOCYTE DN
CORUM RESPIRATORY CHAIN COMPLEX I GAMMA SUBUNIT MITOCHONDRIAL
CORUM RESPIRATORY CHAIN COMPLEX I LAMBDA SUBUNIT MITOCHONDRIAL
SCHLOSSER MYC AND SERUM RESPONSE SYNERGY
REACTOME BASE EXCISION REPAIR
REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING
STARK PREFRONTAL CORTEX 22Q11 DELETION DN
NCI UNWINDING OF DNA
PENG LEUCINE DEPRIVATION DN
PENG GLUTAMINE DEPRIVATION UP
KEGG BASE EXCISION REPAIR
REACTOME DUAL INCISION REACTION IN TC NER
JEON SMAD6 TARGETS DN
TANG SENESCENCE TP53 TARGETS DN
NCI FORMATION OF ATP BY CHEMIOSMOTIC COUPLING
REACTOME SYNTHESIS OF DNA
NCI SYNTHESIS OF DNA
KAUFFMANN DNA REPAIR GENES
NCI DUAL INCISION REACTION IN TC NER
CORUM 12S U11 SNRNP
REACTOME UNWINDING OF DNA
NCI MICRORNA MIRNA BIOGENESIS
CORUM MCM COMPLEX
REACTOME HOMOLOGOUS RECOMBINATION REPAIR
MOOTHA PGC
KEGG NUCLEOTIDE EXCISION REPAIR
REACTOME INFLUENZA LIFE CYCLE
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
burkholderia pseudomalleipseudomonas aeruginosa fdr1lactobacillus acidophilusbifidobacterium bifidumGeneSet Name
-0.00050 -0.11916 -0.00055 -0.00023SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP
-0.00177 -0.09315 -0.00034 -0.00001WELCSH_BRCA1_TARGETS_1_DN
-0.00209 -0.06252 -0.00076 -0.00003REACTOME_TRANSCRIPTION_COUPLED_NER
-0.04587 -0.09998 -0.00399 -0.00051LOPEZ_MESOTELIOMA_SURVIVAL_TIME_UP
-0.00534 -0.08909 -0.00308 -0.00153GRADE_COLON_CANCER_UP
-0.07629 -0.02847 -0.03113 -0.02293CORUM_RESPIRATORY_CHAIN_COMPLEX_I_INCOMPLETE_INTERMEDIATE_MITOCHONDRIAL
-0.00042 -0.09087 -0.00006 -0.00022MONTERO_THYROID_CANCER_POOR_SURVIVAL_UP
-0.00073 -0.12079 -0.00892 -0.02902KUMAMOTO_RESPONSE_TO_NUTLIN_3A_DN
-0.00540 -0.06906 -0.00096 -0.03082CORUM_18S_U11/U12_SNRNP
-0.06424 -0.01290 -0.04150 -0.11001NCI_TRANSCRIPTION_COUPLED_NER__TC_NER_
-0.00001 -0.04394 -0.00617 -0.01617YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_13
-0.00001 -0.00002 -0.06903 -0.01713KEGG_PARKINSONS_DISEASE
-0.00016 -0.02511 -0.01315 -0.00435PRAMOONJAGO_SOX4_TARGETS_DN
-0.00208 -0.05776 -0.00033 -0.00004REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.00796 -0.00484 -0.03486 -0.00740KEGG_HUNTINGTONS_DISEASE
-0.02240 -0.00379 -0.01687 -0.00893CORUM_RESPIRATORY_CHAIN_COMPLEX_I_BETA_SUBUNIT_MITOCHONDRIAL
-0.03491 -0.11026 -0.07899 -0.00390CORUM_F1F0-ATP_SYNTHASE_EC_3.6.3.14_MITOCHONDRIAL
-0.00518 -0.05182 -0.03769 -0.02481REACTOME_INTEGRATION_OF_ENERGY_METABOLISM
-0.16600 -0.06943 -0.00654 -0.02452CORUM_RNA_POLYMERASE_II_CORE_COMPLEX
-0.16652 -0.15095 -0.04371 -0.01217MODY_HIPPOCAMPUS_PRENATAL
-0.05508 -0.01468 -0.04376 -0.11951NCI_FORMATION_OF_TRANSCRIPTION_COUPLED_NER__TC_NER__REPAIR_COMPLEX
-0.12436 -0.11564 -0.00634 -0.01355CORUM_BRCA1-CORE_RNA_POLYMERASE_II_COMPLEX
-0.00046 -0.00001 -0.00183 -0.00930WONG_MITOCHONDRIA_GENE_MODULE
-0.03407 -0.04030 -0.03064 -0.01085NCI_DNA_REPLICATION
-0.04260 -0.03497 -0.04967 -0.07164REACTOME_DIABETES_PATHWAYS
-0.00178 -0.04809 -0.00039 -0.00104MOOTHA_MITOCHONDRIA
-0.07686 -0.18948 -0.03374 -0.09579LUI_THYROID_CANCER_CLUSTER_3
-0.03193 -0.14856 -0.00886 -0.00061REACTOME_G2_M_TRANSITION
-0.00096 -0.00004 -0.00063 -0.00038REACTOME_GLUCOSE_REGULATION_OF_INSULIN_SECRETION
-0.00246 -0.01450 -0.03992 -0.02064CHEN_HOXA5_TARGETS_9HR_DN
-0.00119 -0.11974 -0.00167 -0.02061POMEROY_MEDULLOBLASTOMA_PROGNOSIS_DN
-0.00015 -0.18966 -0.09184 -0.01883MULLIGHAN_MLL_SIGNATURE_2_UP
-0.00728 -0.00836 -0.01819 -0.01366REACTOME_REGULATION_OF_INSULIN_SECRETION
-0.00680 -0.10445 -0.05857 -0.00292MORI_MATURE_B_LYMPHOCYTE_DN
-0.08354 -0.06316 -0.08784 -0.07070CORUM_RESPIRATORY_CHAIN_COMPLEX_I_GAMMA_SUBUNIT_MITOCHONDRIAL
-0.04865 -0.00538 -0.01714 -0.01698CORUM_RESPIRATORY_CHAIN_COMPLEX_I_LAMBDA_SUBUNIT_MITOCHONDRIAL
-0.00102 -0.15433 -0.00809 -0.01125SCHLOSSER_MYC_AND_SERUM_RESPONSE_SYNERGY
-0.09416 -0.10176 -0.01351 -0.00624REACTOME_BASE_EXCISION_REPAIR
-0.05144 -0.14878 -0.08618 -0.00556REACTOME_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING
-0.00725 -0.14836 -0.00020 -0.00785STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN
-0.00072 -0.04166 -0.00096 -0.00503NCI_UNWINDING_OF_DNA
-0.03319 -0.12045 -0.00030 -0.00823PENG_LEUCINE_DEPRIVATION_DN
-0.07132 -0.18238 -0.13436 -0.05347PENG_GLUTAMINE_DEPRIVATION_UP
-0.00205 -0.19014 -0.00130 -0.00058KEGG_BASE_EXCISION_REPAIR
-0.00676 -0.01495 -0.04348 -0.11668REACTOME_DUAL_INCISION_REACTION_IN_TC_NER
-0.00740 -0.18213 -0.00003 -0.00006JEON_SMAD6_TARGETS_DN
-0.00127 -0.00161 -0.00887 -0.00022TANG_SENESCENCE_TP53_TARGETS_DN
-0.05126 -0.16134 -0.08124 -0.00693NCI_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING
-0.04929 -0.10092 -0.03098 -0.00140REACTOME_SYNTHESIS_OF_DNA
-0.03312 -0.03219 -0.02542 -0.01158NCI_SYNTHESIS_OF_DNA
-0.00140 -0.15224 -0.00009 -0.00001KAUFFMANN_DNA_REPAIR_GENES
-0.06425 -0.01495 -0.04224 -0.10993NCI_DUAL_INCISION_REACTION_IN_TC_NER
-0.01094 -0.14958 -0.05741 -0.07567CORUM_12S_U11_SNRNP
-0.00279 -0.04258 -0.01181 -0.00453REACTOME_UNWINDING_OF_DNA
-0.06554 -0.16345 -0.00152 -0.00706NCI_MICRORNA__MIRNA__BIOGENESIS
-0.00534 -0.18877 -0.00509 -0.00700CORUM_MCM_COMPLEX
-0.04299 -0.03726 -0.02116 -0.00040REACTOME_HOMOLOGOUS_RECOMBINATION_REPAIR
-0.02598 -0.19581 -0.01653 -0.06925MOOTHA_PGC
-0.01443 -0.10245 -0.00448 -0.00238KEGG_NUCLEOTIDE_EXCISION_REPAIR
-0.10807 -0.00127 -0.03007 -0.02512REACTOME_INFLUENZA_LIFE_CYCLE