BICLUSTER_ID : DNREG-180
PATHOGENS /5/ : pseudomonas aeruginosa,staphylococcus aureus,aggregatibacter actinomycetemcomitans,lactobacillus acidophilus,helicobacter pylori
TARGETS /4/ : SQLE, HDAC2, MGST3, ACAT2
Gene SetLeading Edge Genes
SANA RESPONSE TO IFNG DNRAN, HDAC2, ILF2, SNRPD2, MGST3, CCT5, SMYD2
WEST ADRENOCORTICAL TUMOR UPBUB1B, SQLE, SC5DL, BUB1, ACAT2, CDC25C, TCP1, CCNB1, MELK, TOP2A, CENPF, KIF2C
CHEMNITZ RESPONSE TO PROSTAGLANDIN E2 UP
NAKAMURA TUMOR ZONE PERIPHERAL VS CENTRAL UP
JIANG HYPOXIA CANCER
PUJANA BRCA1 PCC NETWORK
BOYAULT LIVER CANCER SUBCLASS G123 UP
BENPORATH CYCLING GENES
BHATTACHARYA EMBRYONIC STEM CELL
REACTOME CELL CYCLE CHECKPOINTS
RHODES UNDIFFERENTIATED CANCER
ALONSO METASTASIS UP
DING LUNG CANCER EXPRESSION BY COPY NUMBER
KEGG OXIDATIVE PHOSPHORYLATION
NCI PLK1 PATHWAY
CAFFAREL RESPONSE TO THC 24HR 5 UP
KEGG PARKINSONS DISEASE
MOREAUX B LYMPHOCYTE MATURATION BY TACI DN
LEE LIVER CANCER SURVIVAL DN
NCI REPAIR SYNTHESIS FOR GAP FILLING BY DNA POLYMERASE IN TC NER
GARY CD5 TARGETS DN
RODRIGUES THYROID CARCINOMA ANAPLASTIC UP
ZHAN VARIABLE EARLY DIFFERENTIATION GENES DN
REN BOUND BY E2FMSH2, TOP2A, CENPA
FINETTI BREAST CANCER BASAL VS LUMINAL
NCI PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC
NCI MITOTIC PROMETAPHASE
GOLDRATH HOMEOSTATIC PROLIFERATION
BOYAULT LIVER CANCER SUBCLASS G23 UP
REACTOME G1 S TRANSITION
WELCSH BRCA1 TARGETS 1 UP
BLALOCK ALZHEIMERS DISEASE DN
MOHANKUMAR TLX1 TARGETS UP
REACTOME S PHASE
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UP
FINETTI BREAST CANCER KINOME RED
MOREAUX MULTIPLE MYELOMA BY TACI DN
FARMER BREAST CANCER CLUSTER 2
REACTOME CYCLIN A1 ASSOCIATED EVENTS DURING G2 M TRANSITION
RHODES CANCER META SIGNATURE
VANTVEER BREAST CANCER METASTASIS DN
MARTINEZ RESPONSE TO TRABECTEDIN DN
REACTOME SYNTHESIS OF DNA
SCIBETTA KDM5B TARGETS DN
REACTOME DNA REPLICATION PRE INITIATION
DODD NASOPHARYNGEAL CARCINOMA DN
GOLDRATH ANTIGEN RESPONSE
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
helicobacter pylori kx2 npgeclactobacillus acidophilusstaphylococcus aureuspseudomonas aeruginosaaggregatibacter actinomycetemcomitansGeneSet Name
-0.00979 -0.00201 -0.00065 -0.01466 -0.03439SANA_RESPONSE_TO_IFNG_DN
-0.00769 -0.00173 -0.00049 -0.01510 -0.03574WEST_ADRENOCORTICAL_TUMOR_UP
-0.01724 -0.00001 -0.04929 -0.18697 -0.12795CHEMNITZ_RESPONSE_TO_PROSTAGLANDIN_E2_UP
-0.00115 -0.00268 -0.04316 -0.15840 -0.00022NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_UP
-0.00238 -0.09610 -0.00599 -0.02512 -0.12287JIANG_HYPOXIA_CANCER
-0.04039 -0.00009 -0.00645 -0.01546 -0.12299PUJANA_BRCA1_PCC_NETWORK
-0.06351 -0.09604 -0.03982 -0.01718 -0.18306BOYAULT_LIVER_CANCER_SUBCLASS_G123_UP
-0.02705 -0.00012 -0.03303 -0.01705 -0.00307BENPORATH_CYCLING_GENES
-0.01840 -0.04152 -0.01053 -0.03178 -0.19173BHATTACHARYA_EMBRYONIC_STEM_CELL
-0.00003 -0.00613 -0.00010 -0.00423 -0.02580REACTOME_CELL_CYCLE_CHECKPOINTS
-0.00065 -0.00080 -0.16035 -0.02924 -0.00010RHODES_UNDIFFERENTIATED_CANCER
-0.01661 -0.09912 -0.00010 -0.01131 -0.00933ALONSO_METASTASIS_UP
-0.07293 -0.19751 -0.05197 -0.00113 -0.12832DING_LUNG_CANCER_EXPRESSION_BY_COPY_NUMBER
-0.02319 -0.02616 -0.00014 -0.04935 -0.01268KEGG_OXIDATIVE_PHOSPHORYLATION
-0.00213 -0.00001 -0.11266 -0.01327 -0.09503NCI_PLK1_PATHWAY
-0.11056 -0.02056 -0.02005 -0.14486 -0.03560CAFFAREL_RESPONSE_TO_THC_24HR_5_UP
-0.00236 -0.06903 -0.00034 -0.04469 -0.01663KEGG_PARKINSONS_DISEASE
-0.04233 -0.03986 -0.00074 -0.07235 -0.03024MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_DN
-0.00657 -0.00627 -0.00026 -0.00284 -0.00031LEE_LIVER_CANCER_SURVIVAL_DN
-0.01553 -0.00254 -0.14370 -0.18027 -0.12874NCI_REPAIR_SYNTHESIS_FOR_GAP_FILLING_BY_DNA_POLYMERASE_IN_TC_NER
-0.04586 -0.00608 -0.00522 -0.01258 -0.00636GARY_CD5_TARGETS_DN
-0.13148 -0.00988 -0.11758 -0.16016 -0.02535RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP
-0.06031 -0.13352 -0.04161 -0.07862 -0.00076ZHAN_VARIABLE_EARLY_DIFFERENTIATION_GENES_DN
-0.01436 -0.00002 -0.01841 -0.00642 -0.02215REN_BOUND_BY_E2F
-0.03351 -0.00058 -0.11750 -0.12915 -0.01024FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL
-0.14286 -0.01049 -0.08969 -0.09104 -0.02748NCI_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE__TO_CCT_TRIC
-0.00583 -0.00003 -0.05445 -0.00094 -0.16560NCI_MITOTIC_PROMETAPHASE
-0.00903 -0.00229 -0.03440 -0.18933 -0.08614GOLDRATH_HOMEOSTATIC_PROLIFERATION
-0.17014 -0.00067 -0.04362 -0.17995 -0.12897BOYAULT_LIVER_CANCER_SUBCLASS_G23_UP
-0.00214 -0.00092 -0.00036 -0.05329 -0.01052REACTOME_G1_S_TRANSITION
-0.00630 -0.19359 -0.00959 -0.00404 -0.04485WELCSH_BRCA1_TARGETS_1_UP
-0.01929 -0.08398 -0.01207 -0.00026 -0.18332BLALOCK_ALZHEIMERS_DISEASE_DN
-0.02038 -0.03991 -0.04446 -0.02157 -0.18750MOHANKUMAR_TLX1_TARGETS_UP
-0.00017 -0.00260 -0.00011 -0.10989 -0.00982REACTOME_S_PHASE
-0.00489 -0.00129 -0.00628 -0.01279 -0.07824ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.02908 -0.00052 -0.08255 -0.09937 -0.02729FINETTI_BREAST_CANCER_KINOME_RED
-0.10216 -0.01167 -0.00030 -0.01021 -0.01891MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.00412 -0.00003 -0.10371 -0.00958 -0.00225FARMER_BREAST_CANCER_CLUSTER_2
-0.00945 -0.00020 -0.15793 -0.03396 -0.13915REACTOME_CYCLIN_A1_ASSOCIATED_EVENTS_DURING_G2_M_TRANSITION
-0.04160 -0.03156 -0.01707 -0.02762 -0.18769RHODES_CANCER_META_SIGNATURE
-0.11662 -0.00002 -0.13046 -0.00024 -0.06593VANTVEER_BREAST_CANCER_METASTASIS_DN
-0.12049 -0.00324 -0.02178 -0.00098 -0.02048MARTINEZ_RESPONSE_TO_TRABECTEDIN_DN
-0.00016 -0.03098 -0.00014 -0.12476 -0.02170REACTOME_SYNTHESIS_OF_DNA
-0.00149 -0.00009 -0.11866 -0.02302 -0.04657SCIBETTA_KDM5B_TARGETS_DN
-0.00061 -0.01571 -0.00420 -0.08852 -0.07063REACTOME_DNA_REPLICATION_PRE_INITIATION
-0.03870 -0.00002 -0.00626 -0.00288 -0.07577DODD_NASOPHARYNGEAL_CARCINOMA_DN
-0.02222 -0.00286 -0.03417 -0.11188 -0.14192GOLDRATH_ANTIGEN_RESPONSE