BICLUSTER_ID : DNREG-190
PATHOGENS /1/ : pseudomonas aeruginosa
TARGETS /55/ : SQLE, SYK, HMGCR, ALDH3A2, PPP1CC, NARS, TARS, PSMB1, AURKA, ASNS, CANX, ADSL, NDUFS1, SDHC, ADH5, CALM2, NDUFA6, EPRS, GMPS, SV2A, MUT, WEE1, NDUFS2, MCM6, FYN, SLC5A6, LTA4H, MTHFD1, ALDH7A1, VDAC3, MAPK14, HSP90AA1, CAT, RRM1, ADRBK2, ATIC, ALDH9A1, NDUFB3, DUT, CTH, SC4MOL, PTDSS1, PCMT1, NDUFA9, PCCB, PARP1, ACAT2, NR3C1, HADH, HADHA, SLC25A5, BAAT, ALDH5A1, GLUL, IARS
Gene SetLeading Edge Genes
CASORELLI ACUTE PROMYELOCYTIC LEUKEMIA DNHMGCR, DLEU1, RAB3GAP1, HSPD1, NOLC1, ARID5B, CENPA, INPP4B, SCD, GINS1, EPRS, BLMH, NCAPH, TAF15, SV2A, SSRP1, WDHD1, TMEM97, MKI67, ASH2L, POLD3, MAPK14, DLC1, NUP155, CSE1L, EED, TBC1D4, EPB41L2, SC4MOL, ACAT2, HADHA, HADH, CCT5, PLEKHB2, FDFT1, SMC4, KIF2C, GLUL, SQLE, DKC1, CCNB1, ARHGAP19, TOP2A, CENPF, RABGAP1, PPID, C7ORF44, RAD23B, SAMM50, NEK9, EXOSC2, GTF2H3, BUB1B, SNX17, TIMELESS, NDN, HSP90AA1, MLLT3, SPAG5, ATIC, RFC4, SERINC3, ACTR2, CTDSPL, CD24, CCNB2, HEXIM1, CDC25C, LMO4, NONO, ACLY, ELOVL5, SRPK2
CAIRO HEPATOBLASTOMA CLASSES UPSQLE, ANGEL1, MTDH, EEF1B2, HSPD1, NOLC1, DKC1, TMPO, CCNB1, PPP1CC, RPN2, CENPA, ATP2B1, ADSL, RPL22, TOP2A, CENPF, GINS1, EPRS, BLMH, SMARCC1, DDX1, MDN1, MCM6, CREB3L2, SSRP1, NUP205, EXOSC2, HDHD1A, BUB1B, LRPPRC, TMEM97, TIMELESS, LTA4H, FXR1, MKI67, TMEM5, CCT6A, ZNHIT3, SPAG5, CSE1L, RRM1, SF3B3, ATIC, RFC4, OIP5, PTDSS1, CCNB2, TTK, MSH6, SSB, TPX2, CDC25C, CCT5, PMS1, C18ORF10, NONO, DOPEY2, SUPT4H1, ACLY, SMC4, HUWE1, KIF2C, IARS, HMGB2
WONG EMBRYONIC STEM CELL CORESQLE, SET, CTNNA1, PRPS1, ADSL, FH, RPL22, TOP2A, SDHC, ADH5, NCAPH, RAD23B, WEE1, AMOTL2, WDHD1, BLM, PABPC1, BUB1B, LMNB1, SPAG5, CSE1L, RRM1, NDUFA9, TTK, CCNB2, SSB, HADH, POLE2, CCT5, SLC25A5, NONO, SMC4, IARS, PRIM1, HMGB2
HORIUCHI WTAP TARGETS DNSQLE, SEPHS1, HMGCR, NCAPD2, EEF1B2, TMPO, CCNB1, CENPA, CANX, TOP2A, RFC5, COX7B, PAPOLA, KIF14, PGRMC2, BUB1B, TMEM97, PPM1A, LMNB1, MKI67, SPAG5, HSP90AA1, CAT, RRM1, OIP5, PEG10, TTK, CCNB2, MBNL1, ACAT2, TPX2, UNG, SLC25A5, FDFT1, H2AFV, NMT2, KIF2C, HMGB2
KEGG PARKINSONS DISEASEVDAC3, NDUFS1, SDHC, COX7B, ATP5O, NDUFA6, NDUFB3, NDUFA9, PPID, GPR37, ATP5G1, COX4I1, SLC25A5, ATP5J, COX6B1, NDUFS2, UQCRC2, COX6C
KEGG PROPANOATE METABOLISMALDH9A1, PCCB, ACAT2, ALDH3A2, ALDH7A1, HADHA, MUT
MANALO HYPOXIA DNTMEM5, DKC1, MTHFD1, NOLC1, FANCG, CSE1L, RRM1, ATIC, MRPL40, PRPS1, PARP2, OIP5, RFC5, GINS1, EXOSC8, ACAT2, POLE2, GPD1L, MCM6, SLC5A6, NUP205, IARS, EXOSC2
PUJANA BRCA2 PCC NETWORKNCAPD2, TMPO, HDAC4, RFC5, GINS1, BLMH, NCAPH, EXOSC8, GMPS, CDKN2C, MCM6, COPS3, SSRP1, ZNF184, PPP2R5C, WDHD1, MKI67, MLH1, FZD2, POLD3, ZNHIT3, SMC1A, GNPAT, PHF20, KIAA0922, OGT, CD1E, PCCB, ACAT2, UNG, FDFT1, RPA1, SMC4, KIF2C, HMGB2, SEPHS1, CCNB1, RAD51C, PRPS1, ARHGAP19, TOPBP1, TOP2A, CENPF, NFATC2IP, CDC23, CASP2, KIF14, DDX46, NUP205, BLM, EXOSC2, BUB1B, ATR, LMNB1, TIMELESS, CASP6, FANCG, SPAG5, RRM1, RFC4, TTF1, PSIP1, PTDSS1, CCNB2, TTK, HMGN1, CDC25C, POLE2, H2AFV, WDR67, H2AFY, ELOVL5, SYCP2, PRIM1
GEORGES TARGETS OF MIR192 AND MIR215UBL3, TMEM66, MTDH, COBLL1, TMPO, PRPS2, PLCE1, CENPA, MAPK9, RHOBTB3, ARHGAP19, PARN, TOPBP1, CENPF, ENC1, SCD, NCAPH, ZFP161, KIF14, MCM6, CIT, ZNF184, UQCRC2, PODXL, BLM, BUB1B, MEIS2, MXI1, PPM1A, LMNB1, MKI67, CHML, RAB40B, TMED10, ZNHIT3, TCEB3, ADRBK2, ALDH9A1, RFC4, ACTR2, ALCAM, CTH, TOR1AIP1, TTK, NSF, MSH6, LRRFIP1, GPR37, C5ORF13, UNG, HADH, KIAA0240, ALDH5A1, MDC1, TBL1X, C18ORF10, C14ORF143, WDR67, SMC4, ZMYND11, ELOVL5, ATP5L, PRIM1, DEGS1
REACTOME CELL CYCLE MITOTICBUB1B, PSMC5, CETN2, POLD3, CCNB1, PPP1CC, HSP90AA1, AZI1, CENPA, PSMB1, SMC1A, RFC4, STAG1, SMC3, RFC5, CENPF, GINS1, CCNB2, CDC23, CDC25C, POLE2, WEE1, MCM6, ZW10, PSMC2, PPP2R5C, KIF2C, PRIM1
BLUM RESPONSE TO SALIRASIB DNDPYSL3, TOP2B, TMPO, GALNT1, CENPA, PRPS1, TOP2A, TOPBP1, RFC5, ENC1, CENPF, RGS2, ADCY9, CDKN2C, MCM6, YWHAQ, IRS1, MEST, MEIS2, BUB1B, TIMELESS, MKI67, MTHFD1, FZD2, H2AFZ, VDAC3, RAB40B, HSP90AA1, SPAG5, SMC1A, CSE1L, RRM1, RFC4, CCNB2, TTK, MSH6, NR2F1, TPX2, CDC25C, POLE2, UBE2E3, PRDX3, GTF2I /// GTF2IP1 //, H2AFV, ACLY, H2AFY, KIF2C, PRIM1
GENTILE UV RESPONSE CLUSTER D8SQLE, HMGCR, PARP1, C5ORF13, MAPK14, NR2F2, STK24, FYN, IRS1, MN1, CDYL, TOP2A
LINDGREN BLADDER CANCER CLUSTER 3 UPDYNLT3, HSPD1, TMPO, H2AFZ, PRPS2, CCNB1, RAD51C, LOC81691, STMN1, CENPA, TARS, SERP1, GNPAT, RFC4, ALDH9A1, TOP2A, CENPF, CCNB2, NDUFA9, TOM1L1, CDKN2C, CPD, PTPLB, MDC1, MCM6, YWHAQ, H2AFV, ANXA4, WDHD1, KIF2C, HMGB2
BENPORATH CYCLING GENESSNUPN, ARL4A, SEPHS1, DKC1, TMPO, RAD51C, KIAA0182, RHOBTB3, STAG1, ARHGAP19, TOP2A, TOPBP1, CENPF, MYCBP2, CDKN2C, MCM6, CIT, FYN, BUB1B, LMNB1, MKI67, POLD3, SPAG5, RRM1, LARP1, RERE, RFC4, CD24, OGT, CCNB2, CDC25C, NR3C1, MNT, UNG, BRD8, MDC1, LMO4, MITF, ANP32B, SMC4, KIF2C, PRIM1, HMGB2
MUELLER PLURINETBUB1B, SET, ARL4A, SEPHS1, CASP6, HSPD1, MTHFD1, NOLC1, TMPO, CCNB1, SPAG5, ATIC, RFC4, MYST2, ERCC5, PSIP1, CCNB2, SMARCC1, MSH6, PPID, EXOSC8, SSB, CDC25C, UNG, WEE1, MCM6, COPS3, PPM1B, PTMA, BLM
VANTVEER BREAST CANCER METASTASIS DNPTDSS1, CCNB2, MTDH, GMPS, RAB6B, CENPA, STMN1, MCM6, KIF14, ASNS, RFC4, GBE1, SMC4, ESM1, DEGS1
NCI CYTOSOLIC TRNA AMINOACYLATIONEPRS, IARS, NARS, RARS
GRAHAM NORMAL QUIESCENT VS NORMAL DIVIDING DNBUB1B, GINS1, CCNB2, POLE2, VDAC3, MCM6, CSE1L, RRM1, RFC4, OIP5, TOP2A, KIF2C
REACTOME CYTOSOLIC TRNA AMINOACYLATIONEPRS, IARS, NARS, RARS
NUYTTEN EZH2 TARGETS DNSET, NCAPD2, TMPO, CETN3, CENPA, GLT8D1, INPP4B, CANX, RFC5, POLR2G, NCAPH, SP3, EXOSC8, ADCY9, AUH, EIF4EBP2, ZNF185, NUP88, YWHAQ, SSRP1, CCT4, PTMA, GAPVD1, WDHD1, TMEM97, PPM1A, GYG1, NUP155, CSE1L, GNPAT, DPY19L4, TPX2, BRD8, WIPI2, TBL1X, MDC1, PPM1B, SMC4, KIF2C, HMGB2, XRCC1, DKC1, ALDH3A2, PRPS2, RAD51C, CCNB1, TOPBP1, TOP2A, CENPF, CNOT1, TRIM37, PAPOLA, WEE1, KIF14, TMEM30B, NEK9, BLM, EXOSC2, TIMELESS, LMNB1, CASP6, RBBP5, FANCG, SPAG5, AZI1, DDHD2, LARP1, RFC4, PATZ1, GALK2, OIP5, CCNB2, TTK, PPP3CB, CDC25C, C14ORF143, H2AFV, WDR67, PRIM1
REACTOME TRNA AMINOACYLATIONEPRS, IARS, NARS, RARS
REN BOUND BY E2FDUT, RFC3, TTK, MLH1, UNG, H2AFZ, CENPA, MCM6, RRM1, SUPT4H1, RFC4, TOP2A
NAKAMURA CANCER MICROENVIRONMENT DNCTH, CCNB2, NDUFA9, RFC4, KIF2C, IARS, SPAG5
KEGG AMINOACYL TRNA BIOSYNTHESISEPRS, IARS, NARS, RARS
SHEDDEN LUNG CANCER POOR SURVIVAL A6IGF2BP3, SEPHS1, NOLC1, ATP2B1, MTIF2, PRPS1, TOP2A, CENPF, SCD, GINS1, PPID, CDKN2C, KIF14, MCM6, WDHD1, EXOSC2, BUB1B, LRPPRC, LMNB1, MKI67, SPAG5, CSE1L, RFC4, OIP5, NDUFA9, PCMT1, CCNB2, GPR37, MSH6, CDC25C, HEXIM1, POLE2, ESM1, KIF2C, PRIM1, HMGB2
PUJANA XPRSS INT NETWORKRFC3, NCAPD2, TMPO, RAD51C, PRPS1, TOPBP1, TOP2A, NFATC2IP, GINS1, BLMH, EXOSC8, MTF2, CDKN2C, MCM6, CASP2, COPS3, DDX46, PPP2R5C, BLM, TIMELESS, LMNB1, MKI67, ZNHIT3, SMC1A, RRM1, KIAA0922, RFC4, HMMR, PSIP1, DUT, HMGN1, UNG, GTSE1, DNAJC9, MRE11A, H2AFV, RPA1, SMC4, HMGB2
PUJANA BRCA CENTERED NETWORKRFC3, LMNB1, TIMELESS, TMPO, RAD51C, RRM1, RFC4, PRPS1, TOPBP1, TOP2A, DUT, UNG, MCM6, COPS3, MRE11A, RPA1, PPP2R5C, BLM, HMGB2
MORI LARGE PRE BII LYMPHOCYTE UPNCAPH, SMARCC1, TTK, LMNB1, CDKN2C, H2AFZ, CENPA, MCM6, RRM1, H2AFV, SMC4, TOP2A, CALM2
REACTOME MITOTIC M M G1 PHASESBUB1B, PSMC5, PPP1CC, CENPA, PSMB1, SMC1A, MCM6, ZW10, STAG1, SMC3, PSMC2, PPP2R5C, KIF2C, CENPF
REACTOME CELL CYCLE CHECKPOINTSBUB1B, PSMC5, CCNB2, ATR, CDC23, CDC25C, WEE1, CCNB1, MCM6, RFC4, PSMC2
SLEBOS HEAD AND NECK CANCER WITH HPV UPINPP5B, CDKN2C, MLH1, CELSR3, WEE1, MCM6, DNAJC13, RFC4, TOPBP1, SYCP2
KOBAYASHI EGFR SIGNALING 24HR DNNOLC1, TMPO, CCNB1, CENPA, PRPS1, PARP2, TOP2A, RFC5, GINS1, EXOSC8, MCM6, BLM, BUB1B, TIMELESS, LMNB1, MKI67, ETV1, H2AFZ, SPAG5, CSE1L, RRM1, RFC4, TTK, MSH6, TPX2, STEAP1, UNG, POLE2, ETV5, KIF2C, HMGB2, PRIM1
KANG DOXORUBICIN RESISTANCE UPBUB1B, LMNB1, MKI67, ZWINT, CENPA, FOXM1, BARD1, AURKA, RRM1, RFC4, OIP5, HMMR, TOP2A, GINS1, KIAA0101, TPX2, CDC6, BIRC5, HMGB2
IIZUKA LIVER CANCER PROGRESSION G2 G3 UPPRDX6, PPM1A, RAPGEF2, COBLL1, HADH, BAAT
REACTOME G2 M CHECKPOINTSMCM6, CCNB2, ATR, RFC4, CDC25C, WEE1, CCNB1
MORI IMMATURE B LYMPHOCYTE DNNCAPH, TTK, LMNB1, CDKN2C, CCNB1, CENPA, MCM6, RRM1, H2AFV, SMC4, TOP2A, PRIM1
CORUM MULTISYNTHETASE COMPLEXEPRS, IARS, RARS
AMUNDSON GAMMA RADIATION RESPONSECCNB2, TTK, LBR, CDKN2C, CDC25C, CCNB1, WEE1, CENPA, AURKA, CKS2, CENPF
LEE EARLY T LYMPHOCYTE UPBUB1B, GINS1, CCNB2, TTK, SYK, MKI67, CCNB1, CENPA, KIAA0182, OIP5, TOP2A, KIF2C, CD1E
NCI AURORA B PATHWAYNCAPH, NCAPD2, EVI5, PPP1CC, TACC1, CENPA, STMN1, SMC4, KIF2C, NPM1
ODONNELL TARGETS OF MYC AND TFRC DNBUB1B, POLE2, CCNB1, FOXM1, AURKA, TOP2A, SCD, CENPF
ZHAN MULTIPLE MYELOMA PR UPBUB1B, CCNB2, TTK, TPX2, CCNB1, KIF14, AURKA, FOXM1, RFC4, TOP2A
MARKEY RB1 ACUTE LOF DNCAV1, SET, MKI67, HSPD1, TMPO, H2AFZ, CCNB1, CENPA, CSE1L, RFC4, ADSL, TOPBP1, RFC5, OGT, YLPM1, PSIP1, CCNB2, TRIM37, CDC25C, H2AFV, ZMYND11, RBMX, PRIM1
KAUFFMANN MELANOMA RELAPSE UPGTF2H3, MSH6, FANCG, MCM6, RFC4, TOP2A, CENPF, BLM
NCI MITOTIC PROMETAPHASEBUB1B, APITD1, ZWINT, PPP1CC, CENPA, SMC1A, ZW10, STAG1, XPO1, SMC3, KIF2C
CROONQUIST NRAS SIGNALING DNBUB1B, MKI67, POLD3, CCNB1, RAD51C, SPAG5, CENPA, CSE1L, OIP5, TOP2A, NCAPH, GINS1, CCNB2, TPX2, CDC25C, BRD8, WEE1, SMC4, KIF2C, HMGB2
SOTIRIOU BREAST CANCER GRADE 1 VS 3 UPBUB1B, TIMELESS, LMNB1, MKI67, TMPO, H2AFZ, CCNB1, SPAG5, STMN1, CENPA, RFC4, OIP5, TOP2A, CENPF, NCAPH, GINS1, CCNB2, TTK, TPX2, CCT5, MCM6, H2AFV, SNRPG, KIF2C, BLM
KAUFFMANN DNA REPAIR GENESGTF2H3, ATR, POLE3, XRCC1, CETN2, TOP2B, MLH1, XPA, POLD3, CETN3, FANCG, RAD51C, RRM1, RAD50, RFC4, TOP2A, TOPBP1, RFC5, ERCC5, TP53BP1, MSH6, RAD23B, UNG, POLE2, PMS1, SSRP1, FANCL, RPA1, BLM, GTF2H5, HMGB2
REACTOME MITOTIC PROMETAPHASEBUB1B, APITD1, ZWINT, PPP1CC, CENPA, SMC1A, ZW10, STAG1, XPO1, SMC3, PPP2R5C, KIF2C, CENPF
RICKMAN TUMOR DIFFERENTIATED WELL VS POORLY UPCHD1L, C6ORF130, TMEM97, SEPHS1, TMPO, SPAG5, ARHGAP19, OGT, CENPF, GINS1, GFPT1, MSH6, NR2F1, POGZ, ETV5, LMO4, PPM1B, SLC5A6, SMC4, STARD7
SILIGAN TARGETS OF EWS FLI1 FUSION DNASNS, LRBA, TBL1X
REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESSMCM6, RFC3, ATR, RPA1, RFC4, CDC25C
FERREIRA EWINGS SARCOMA UNSTABLE VS STABLE UPPSIP1, NDUFA9, LMNB1, NCAPD2, TMPO, POLE2, RGS6, WDR67, TOP2A, WDHD1, H2AFY, KIF2C, CENPF, BLM, HMGB2
CROONQUIST IL6 DEPRIVATION DNBUB1B, SEPHS1, MKI67, SPP1, CCNB1, SPAG5, CENPA, OIP5, TOP2A, NCAPH, GINS1, CCNB2, TPX2, WEE1, POLE2, SMC4, KIF2C, HMGB2
NAKAMURA LUNG CANCERMCM6, TM4SF4, TOP2A
CHANG CYCLING GENESCCNB2, ARL4A, LMNB1, DKC1, CDC25C, CENPA, CKS2, FOXM1, AURKA, TOP2A
MISSIAGLIA REGULATED BY METHYLATION DNBUB1B, LMNB1, MKI67, TMPO, POLD3, CSE1L, RRM1, RFC4, CENPF, PSIP1, MSH6, LANCL1, CDKN2C, CDC25C, MDC1, ANP32B, RBMX, PRIM1, HMGB2
FUJII YBX1 TARGETS DNBUB1B, ERCC8, LMNB1, CDC23, RAD23B, CDC25C, UNG, POLE2, MCM6, CASP2, RFC4, PRIM1
GRAHAM CML DIVIDING VS NORMAL QUIESCENT UP
KUMAMOTO RESPONSE TO NUTLIN 3A DNCCNB1, CENPF, KIF2C, SPAG5
CORUM BRAFT COMPLEXFANCL, RPA1, MLH1, BLM, FANCG
NCI ASSOCIATION OF LICENSING FACTORS WITH THE PRE REPLICATIVE COMPLEX
MOLENAAR TARGETS OF CCND1 AND CDK4 DN
BENPORATH ES 1
REACTOME PEROXISOMAL LIPID METABOLISM
CORUM F1F0-ATP SYNTHASE EC 3.6.3.14 MITOCHONDRIAL
NCI REPAIR SYNTHESIS FOR GAP FILLING BY DNA POLYMERASE IN TC NER
CORUM CCT MICRO-COMPLEX
FRASOR RESPONSE TO SERM OR FULVESTRANT DN
CORUM PCNA-MSH2-MSH6 COMPLEX
HOFFMANN LARGE TO SMALL PRE BII LYMPHOCYTE UP
ZHANG RESPONSE TO IKK INHIBITOR AND TNF DNCSTF2T, MSH6, ZNF451, DLEU1, NR2F2, GCNT1, MTUS1, KIAA0922, NUMA1, RFC4, AUTS2, WDHD1
BOYAULT LIVER CANCER SUBCLASS G23 UP
KEGG MISMATCH REPAIR
MANN RESPONSE TO AMIFOSTINE DN
FAELT B CLL WITH VH3 21 DNDDX1, YWHAB, MXI1, TBL1X, SERP1, LMO4, CTNNA1, RNF13, CTDSP2
JISON SICKLE CELL DISEASE DN
CORUM DNA SYNTHESOME COMPLEX 13 SUBUNITS
BIOCARTA ATRBRCA PATHWAY
CORUM BRM-SIN3A COMPLEXACTL6A, SMARCC1
PYEON HPV POSITIVE TUMORS UP
JEON SMAD6 TARGETS DN
REACTOME SYNTHESIS OF DNA
GINESTIER BREAST CANCER 20Q13 AMPLIFICATION UP
PYEON CANCER HEAD AND NECK VS CERVICAL UP
CORUM BASC AB 80 COMPLEX BRCA1-ASSOCIATED GENOME SURVEILLANCE COMPLEXMSH6, RFC4, MLH1, BLM
CORUM BASC COMPLEX BRCA1-ASSOCIATED GENOME SURVEILLANCE COMPLEXRAD50, MSH6, RFC4, MLH1, BLM
VANTVEER BREAST CANCER ESR1 UP
MOOTHA VOXPHOS
CHEMNITZ RESPONSE TO PROSTAGLANDIN E2 UP
FERRANDO T ALL WITH MLL ENL FUSION DN
REACTOME ELECTRON TRANSPORT CHAIN
CORUM 18S U11/U12 SNRNP
CORUM DNA SYNTHESOME COMPLEX 17 SUBUNITSPOLE3, RPA1, TOP2B, TOP2A, POLD3, POLE2, PRIM1
NCI FOLDING OF ACTIN BY CCT TRIC
WAKASUGI HAVE ZNF143 BINDING SITES
NCI COOPERATION OF PREFOLDIN AND TRIC CCT IN ACTIN AND TUBULIN FOLDING
NAKAMURA LUNG CANCER MARKERS
NCI CHAPERONIN MEDIATED PROTEIN FOLDING
CORUM BRM-SIN3A-HDAC COMPLEX
YU MYC TARGETS UP
CORUM PCNA-MUTS-ALPHA-MUTL-ALPHA-DNA COMPLEX
ZHONG RESPONSE TO AZACITIDINE AND TSA DN
CHIANG LIVER CANCER SUBCLASS PROLIFERATION UPBUB1B, CCNB2, TTK, LMNB1, MKI67, TPX2, CCNB1, SLC7A7, GPD1L, RFC4, OIP5, TOP2A, KIF2C, CD24, CENPF, HMGB2
NCI ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS
REACTOME G1 S TRANSITION
FOURNIER ACINAR DEVELOPMENT LATE 2
REACTOME S PHASE
KEGG CELL CYCLE
ROSTY CERVICAL CANCER PROLIFERATION CLUSTERBUB1B, LMNB1, MKI67, TMPO, H2AFZ, CCNB1, SPAG5, CENPA, OIP5, TOP2A, CENPF, NCAPH, GINS1, TTK, CCNB2, TPX2, CELSR3, C18ORF10, KIF14, SMC4, KIF2C, HMGB2
FAELT B CLL WITH VH REARRANGEMENTS DNVPS13B, DDX1, PFN2, GTF3A, LDOC1, TMED10, TSPYL4, YWHAQ, MRPL40, PRPS1, KIAA1012, ZMYND11
NCI FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC
CORUM CONDENSIN I-PARP-1-XRCC1 COMPLEXNCAPH, NCAPD2, XRCC1, SMC4
SONG TARGETS OF IE86 CMV PROTEIN
KEGG NUCLEOTIDE EXCISION REPAIRGTF2H3, RFC3, ERCC8, POLE3, CETN2, RAD23B, XPA, POLD3, POLE2, XPC, RPA1, RFC4, ERCC5, RFC5, CUL4B, GTF2H5
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
pseudomonas aeruginosa fdr440pseudomonas aeruginosaGeneSet Name
-0.08117 -0.01995CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_DN
-0.05619 -0.00726CAIRO_HEPATOBLASTOMA_CLASSES_UP
-0.11079 -0.00224WONG_EMBRYONIC_STEM_CELL_CORE
-0.05527 -0.00235HORIUCHI_WTAP_TARGETS_DN
-0.17643 -0.04469KEGG_PARKINSONS_DISEASE
-0.07647 -0.03223KEGG_PROPANOATE_METABOLISM
-0.14929 -0.03027MANALO_HYPOXIA_DN
-0.00002 -0.00097PUJANA_BRCA2_PCC_NETWORK
-0.09879 -0.01016GEORGES_TARGETS_OF_MIR192_AND_MIR215
-0.00616 -0.00096REACTOME_CELL_CYCLE_MITOTIC
-0.01451 -0.00107BLUM_RESPONSE_TO_SALIRASIB_DN
-0.08683 -0.00006GENTILE_UV_RESPONSE_CLUSTER_D8
-0.10513 -0.01432LINDGREN_BLADDER_CANCER_CLUSTER_3_UP
-0.04557 -0.01705BENPORATH_CYCLING_GENES
-0.14959 -0.07862MUELLER_PLURINET
-0.01534 -0.00024VANTVEER_BREAST_CANCER_METASTASIS_DN
-0.07213 -0.00429NCI_CYTOSOLIC_TRNA_AMINOACYLATION
-0.00001 -0.01597GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_DN
-0.04935 -0.00732REACTOME_CYTOSOLIC_TRNA_AMINOACYLATION
-0.00193 -0.00115NUYTTEN_EZH2_TARGETS_DN
-0.08433 -0.00473REACTOME_TRNA_AMINOACYLATION
-0.00103 -0.00642REN_BOUND_BY_E2F
-0.16748 -0.01378NAKAMURA_CANCER_MICROENVIRONMENT_DN
-0.09228 -0.00922KEGG_AMINOACYL_TRNA_BIOSYNTHESIS
-0.16572 -0.01610SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6
-0.00019 -0.00097PUJANA_XPRSS_INT_NETWORK
-0.00050 -0.01365PUJANA_BRCA_CENTERED_NETWORK
-0.00134 -0.02813MORI_LARGE_PRE_BII_LYMPHOCYTE_UP
-0.16003 -0.00227REACTOME_MITOTIC_M_M_G1_PHASES
-0.08869 -0.00423REACTOME_CELL_CYCLE_CHECKPOINTS
-0.12801 -0.02942SLEBOS_HEAD_AND_NECK_CANCER_WITH_HPV_UP
-0.05049 -0.08946KOBAYASHI_EGFR_SIGNALING_24HR_DN
-0.00002 -0.02272KANG_DOXORUBICIN_RESISTANCE_UP
-0.06333 -0.02284IIZUKA_LIVER_CANCER_PROGRESSION_G2_G3_UP
-0.00021 -0.01177REACTOME_G2_M_CHECKPOINTS
-0.00193 -0.07989MORI_IMMATURE_B_LYMPHOCYTE_DN
-0.08216 -0.04214CORUM_MULTISYNTHETASE_COMPLEX
-0.04433 -0.00099AMUNDSON_GAMMA_RADIATION_RESPONSE
-0.00127 -0.00995LEE_EARLY_T_LYMPHOCYTE_UP
-0.13036 -0.00008NCI_AURORA_B_PATHWAY
-0.00593 -0.09189ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN
-0.00846 -0.00283ZHAN_MULTIPLE_MYELOMA_PR_UP
-0.07746 -0.08917MARKEY_RB1_ACUTE_LOF_DN
-0.00001 -0.00004KAUFFMANN_MELANOMA_RELAPSE_UP
-0.17181 -0.00094NCI_MITOTIC_PROMETAPHASE
-0.00026 -0.00118CROONQUIST_NRAS_SIGNALING_DN
-0.00004 -0.02364SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP
-0.00283 -0.04560KAUFFMANN_DNA_REPAIR_GENES
-0.16847 -0.00072REACTOME_MITOTIC_PROMETAPHASE
-0.14858 -0.00868RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_UP
-0.10495 -0.03966SILIGAN_TARGETS_OF_EWS_FLI1_FUSION_DN
-0.00025 -0.06489REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS
-0.00810 -0.05357FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS_STABLE_UP
-0.00002 -0.03272CROONQUIST_IL6_DEPRIVATION_DN
-0.16984 -0.10500NAKAMURA_LUNG_CANCER
-0.05122 -0.01964CHANG_CYCLING_GENES
-0.00001 -0.00099MISSIAGLIA_REGULATED_BY_METHYLATION_DN
-0.00037 -0.02050FUJII_YBX1_TARGETS_DN
-0.02525 -0.18953GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP
-0.04882 -0.07193KUMAMOTO_RESPONSE_TO_NUTLIN_3A_DN
-0.07690 -0.07528CORUM_BRAFT_COMPLEX
-0.11003 -0.15812NCI_ASSOCIATION_OF_LICENSING_FACTORS_WITH_THE_PRE_REPLICATIVE_COMPLEX
-0.07519 -0.16096MOLENAAR_TARGETS_OF_CCND1_AND_CDK4_DN
-0.10814 -0.10956BENPORATH_ES_1
-0.18888 -0.07680REACTOME_PEROXISOMAL_LIPID_METABOLISM
-0.19532 -0.02675CORUM_F1F0-ATP_SYNTHASE_EC_3.6.3.14_MITOCHONDRIAL
-0.12007 -0.18027NCI_REPAIR_SYNTHESIS_FOR_GAP_FILLING_BY_DNA_POLYMERASE_IN_TC_NER
-0.17059 -0.13616CORUM_CCT_MICRO-COMPLEX
-0.07775 -0.10952FRASOR_RESPONSE_TO_SERM_OR_FULVESTRANT_DN
-0.19890 -0.18484CORUM_PCNA-MSH2-MSH6_COMPLEX
-0.02516 -0.11187HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP
-0.01852 -0.04466ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_DN
-0.15757 -0.17995BOYAULT_LIVER_CANCER_SUBCLASS_G23_UP
-0.00771 -0.13621KEGG_MISMATCH_REPAIR
-0.11136 -0.14582MANN_RESPONSE_TO_AMIFOSTINE_DN
-0.06367 -0.00018FAELT_B_CLL_WITH_VH3_21_DN
-0.08956 -0.18163JISON_SICKLE_CELL_DISEASE_DN
-0.09845 -0.19900CORUM_DNA_SYNTHESOME_COMPLEX_13_SUBUNITS
-0.15004 -0.11007BIOCARTA_ATRBRCA_PATHWAY
-0.15138 -0.08935CORUM_BRM-SIN3A_COMPLEX
-0.03239 -0.11517PYEON_HPV_POSITIVE_TUMORS_UP
-0.00748 -0.13834JEON_SMAD6_TARGETS_DN
-0.02563 -0.12476REACTOME_SYNTHESIS_OF_DNA
-0.13059 -0.16257GINESTIER_BREAST_CANCER_20Q13_AMPLIFICATION_UP
-0.00754 -0.11840PYEON_CANCER_HEAD_AND_NECK_VS_CERVICAL_UP
-0.02258 -0.04581CORUM_BASC_AB_80_COMPLEX_BRCA1-ASSOCIATED_GENOME_SURVEILLANCE_COMPLEX
-0.00022 -0.09605CORUM_BASC_COMPLEX_BRCA1-ASSOCIATED_GENOME_SURVEILLANCE_COMPLEX
-0.06714 -0.15651VANTVEER_BREAST_CANCER_ESR1_UP
-0.19906 -0.07540MOOTHA_VOXPHOS
-0.01049 -0.18697CHEMNITZ_RESPONSE_TO_PROSTAGLANDIN_E2_UP
-0.03099 -0.18356FERRANDO_T_ALL_WITH_MLL_ENL_FUSION_DN
-0.17936 -0.07078REACTOME_ELECTRON_TRANSPORT_CHAIN
-0.19494 -0.14234CORUM_18S_U11/U12_SNRNP
-0.03113 -0.07338CORUM_DNA_SYNTHESOME_COMPLEX_17_SUBUNITS
-0.13307 -0.12921NCI_FOLDING_OF_ACTIN_BY_CCT_TRIC
-0.06683 -0.19894WAKASUGI_HAVE_ZNF143_BINDING_SITES
-0.16963 -0.12248NCI_COOPERATION_OF_PREFOLDIN_AND_TRIC_CCT__IN_ACTIN_AND_TUBULIN_FOLDING
-0.16756 -0.11871NAKAMURA_LUNG_CANCER_MARKERS
-0.17039 -0.12159NCI_CHAPERONIN_MEDIATED_PROTEIN_FOLDING
-0.15841 -0.18679CORUM_BRM-SIN3A-HDAC_COMPLEX
-0.04480 -0.12022YU_MYC_TARGETS_UP
-0.12561 -0.13369CORUM_PCNA-MUTS-ALPHA-MUTL-ALPHA-DNA_COMPLEX
-0.07111 -0.10608ZHONG_RESPONSE_TO_AZACITIDINE_AND_TSA_DN
-0.09011 -0.05367CHIANG_LIVER_CANCER_SUBCLASS_PROLIFERATION_UP
-0.14506 -0.10707NCI_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS
-0.18368 -0.05329REACTOME_G1_S_TRANSITION
-0.16190 -0.11866FOURNIER_ACINAR_DEVELOPMENT_LATE_2
-0.01808 -0.10989REACTOME_S_PHASE
-0.18558 -0.00226KEGG_CELL_CYCLE
-0.00002 -0.00901ROSTY_CERVICAL_CANCER_PROLIFERATION_CLUSTER
-0.08878 -0.01766FAELT_B_CLL_WITH_VH_REARRANGEMENTS_DN
-0.16898 -0.13118NCI_FORMATION_OF_TUBULIN_FOLDING_INTERMEDIATES_BY_CCT_TRIC
-0.12452 -0.10103CORUM_CONDENSIN_I-PARP-1-XRCC1_COMPLEX
-0.00237 -0.13343SONG_TARGETS_OF_IE86_CMV_PROTEIN
-0.00033 -0.03758KEGG_NUCLEOTIDE_EXCISION_REPAIR