BICLUSTER_ID : DNREG-196
PATHOGENS /3/ : escherichia coli,aeromonas caviae,mycobacterium tuberculosis
TARGETS /27/ : KIF11, CAD, SLC1A4, DCK, VDAC3, IARS2, NARS2, PSAT1, ALAD, ASRGL1, OXCT1, ALDH9A1, CACNB3, SNRPA, TYMS, DUT, EPRS, PCMT1, APEX1, GAMT, DCXR, GMPS, ADSS, TK1, LIAS, FASN, SLC25A10
Gene SetLeading Edge Genes
KINSEY TARGETS OF EWSR1 FLII FUSION UPRFC3, ESPL1, PCNA, POLE3, RBBP4, SLC1A4, TMPO, BRCA1, CENPA, PSAT1, E2F8, OXCT1, CDCA3, BOLA1, TYMS, FTSJ2, MCM3, EIF4EBP1, MCM5, COPS3, CHEK1, ACYP1, GMCL1, RNASEH2A, TK1, LIAS, KIF2A, TMEM97, KIF11, ATAD2, SKP2, MCM2, ZWILCH, ASRGL1, TMEM48, RUVBL1, NFYB, MCM4, DTL, MAZ, KIF18A, XPO7, SFRS1, GTF2A2, DNAJC9, GPSM2, RPA1, KIF15, MRPL48, BIRC5, PKP4, PHF17, ZWINT, DCK, PLK1, CCNB1, NARS2, CCDC99, SMC2, ASF1B, HTATSF1, MCM10, ORC5L, NAP1L4, SIP1, STAU2, CEP152, ACN9, KNTC1, BUB1B, MAD2L1, TPRKB, PHF20L1, PLK4, ITGB3BP, RFC4, HMMR, PRKDC, SNRPA, TTK, TUBG1, CCNB2, MSH6, CCNE2, CACYBP, POLE2, NET1, ARMC1, ADSS, PRIM1, POLR3F
PUJANA CHEK2 PCC NETWORKRFC3, ESPL1, PCNA, POLE3, RBBP4, FXN, ZWINT, SLC1A4, TMPO, PLK1, DCK, BRCA1, CCNB1, CENPA, IARS2, MRPL3, SMC2, SLBP, FTSJ1, ORC5L, COX11, TOPBP1, ICT1, POLR2G, TYMS, OGG1, ACTL6A, MCM3, METAP1, RECQL4, GMPS, MTX2, COPS3, CHEK1, RNASEH2A, KNTC1, KIF11, CAD, AGL, CENPI, MAD2L1, SKP2, TAF5L, PLK4, CSE1L, ITGB3BP, MPHOSPH6, RFC4, RUVBL1, RPA3, CCNA2, DUT, TTK, PCMT1, CCNB2, MSH6, POLR3G, UNG, CCNE2, SFRS1, POLE2, DNAJC9, RCN2
BLUM RESPONSE TO SALIRASIB DNRFC3, ESPL1, PCNA, NME4, ZWINT, TMPO, PLK1, DCK, BRCA1, CENPA, SMC2, SFRS6, PBK, TOPBP1, HSPA14, TYMS, ABCD3, GAMT, MCM3, ADCY9, RECQL4, MCM5, CHEK1, RAB4A, TK1, RNASEH2A, SLC25A10, BUB1B, KIF11, MAD2L1, SKP2, MCM2, VDAC3, RAB40B, RBBP7, PLK4, ITGB3BP, NFYB, RFC4, RPA3, HMMR, PRKDC, CCNA2, DUT, CCNB2, TUBG1, TTK, MSH6, SFRS1, CCNE2, POLE2, UBE2E3, MRE11A, GPSM2, RPA1, KIF15, FASN, PRIM1
SHEDDEN LUNG CANCER POOR SURVIVAL A6PCNA, ZWINT, DCK, CCNB1, CENPA, SMC2, PBK, PSAT1, MCM10, E2F8, SHCBP1, CDCA3, TYMS, EIF4EBP1, RECQL4, MCM5, CHEK1, TK1, WDR62, KNTC1, SLC25A10, KIF2A, CENPI, ATAD2, KIF11, CAD, MAD2L1, TPRKB, PLK4, RFC4, HMMR, PRKDC, CCNA2, MCM4, DTL, PCMT1, CCNB2, KIF18A, TUBG1, TTK, MSH6, CCNE2, POLE2, DNAJC9, GPSM2, KIF15, XRCC3, BIRC5
RHEIN ALL GLUCOCORTICOID THERAPY DNPCNA, MLF1IP, ZWINT, MRPS33, IARS2, SMC2, E2F8, OXCT1, COX11, TYMS, EPRS, APEX1, PDCD2, GMPS, MCM5, TMEM14A, RAD51, CHEK1, BUB1B, TMEM97, KIF11, MAD2L1, MCM2, ITGB3BP, RFC4, HMMR, PRKDC, MCM4, DUT, DTL, CCNB2, TTK, UNG, POLE2, RPA1, KIF15, PRIM1, BIRC5
HORIUCHI WTAP TARGETS DNKIF20A, ESPL1, BUB1, TMPO, PLK1, CCNB1, CENPA, ASF1B, PBK, CDCA3, TYMS, ABCD3, DCXR, LSM4, TK1, DRG2, BUB1B, TMEM97, KIF11, MAD2L1, CNN2, H2AFX, OIP5, HMMR, POLD1, CCNA2, TRIP13, TTK, CCNB2, TSNAX, POLR3G, UNG, FASN, CDCA8, BIRC5
KOBAYASHI EGFR SIGNALING 24HR DNRFC3, ESPL1, PCNA, ZWINT, TMPO, PLK1, BRCA1, CCNB1, CENPA, CCDC99, SMC2, PBK, ASF1B, PSAT1, MCM10, E2F8, SHCBP1, CDCA3, HSPA14, TYMS, MCM3, MCM5, TK1, RNASEH2A, BUB1B, ATAD2, KIF11, MAD2L1, MCM2, CSE1L, PLK4, ZWILCH, RFC4, HMMR, CCNA2, MCM4, DUT, DTL, TUBG1, TTK, MSH6, UNG, CCNE2, POLE2, DNAJC9, GPSM2, POLR3K, KIF15, BIRC5, PRIM1
WINNEPENNINCKX MELANOMA METASTASIS UPPCNA, KIF11, ZWINT, CCNB1, CENPA, SMC2, RFC4, SHCBP1, RPA3, TYMS, OGG1, CCNB2, MSH6, GMPS, CHEK1, TK1, KNTC1, BIRC5
ZHANG BREAST CANCER PROGENITORS UPPHF17, ACTR6, TMPO, DCK, CETN3, BRCA1, MRPS33, LPHN3, SMC2, PBK, PSAT1, SHCBP1, OXCT1, ORC5L, TOPBP1, ACTL6A, ACYP1, CHEK1, NVL, ATAD2, SKP2, MCM2, VDAC3, RPA3, CCNA2, GMNN, UNG, DNAJC9, HISPPD1, GPSM2, POLR3K, RPA1, PCYOX1, PKP4
MARKEY RB1 ACUTE LOF DNKIF2A, PCNA, KIF11, MAD2L1, TMPO, PLK1, CCNB1, BRCA1, CENPA, SMC2, ALAD, E2F8, RFC4, CCNA2, CDCA3, DTL, CCNB2, DNAJC9, TK1, ZMYND11, BIRC5
BASAKI YBX1 TARGETS UPESPL1, ZWINT, PLK1, CCNB1, CENPA, SMC2, PBK, MCM10, SHCBP1, COTL1, CDCA3, TYMS, MCM3, CDK2AP2, PDLIM7, MCM5, CHEK1, TK1, CAD, CENPI, TPRKB, MAD2L1, MCM2, ZWILCH, PRKDC, CCNA2, SAC3D1, MCM4, DTL, CCNB2, UNG, DNAJC9, BIRC5
LINDGREN BLADDER CANCER CLUSTER 3 UPTMEM97, PCNA, ATAD2, KIF11, MAD2L1, ZWINT, TMPO, PLK1, CCNB1, BRCA1, RBM38, CENPA, PLK4, RBBP7, E2F8, RFC4, ALDH9A1, RPA3, MCM4, SAC3D1, TYMS, CCNB2, MCM5, RNASEH2A, GMCL1, XPOT, BIRC5
MUELLER PLURINETPCNA, TMPO, STXBP2, CCNB1, MCM10, HSPA14, SIP1, MCM3, APEX1, GMPS, MCM5, COPS3, CHEK1, TK1, BUB1B, CASP6, MCM2, ITGB3BP, RFC4, RUVBL1, HMMR, RPA3, CCNA2, POLD1, MCM4, TRIP13, GMNN, CCNB2, MSH6, UNG, MRE11A, RPA1, BIRC5
LI WILMS TUMOR VS FETAL KIDNEY 1 DNESPL1, PCNA, KIF11, POLE3, MAD2L1, BRCA1, PLK4, CACNB3, TOPBP1, CCNB2, TTK, MSH6, UNG, DNAJC9, RNASEH2A, XPOT
REACTOME CELL CYCLE MITOTICRFC3, PCNA, ZWINT, PLK1, CCNB1, CENPA, MCM10, NUP133, TYMS, MCM3, MCM5, CEP152, KNTC1, BUB1B, KIF2A, CENPI, SKP2, MAD2L1, MCM2, PLK4, ITGB3BP, RFC4, RPA3, CCNA2, MCM4, KIF18A, TUBG1, CCNB2, CCNE2, POLE2, RPA1, BIRC5, PRIM1
BOYAULT LIVER CANCER SUBCLASS G23 UPSMC2, MCM3, TUBG1, CCNE2, TYMS, CENPA
REACTOME DNA REPAIROGG1, RFC3, APEX1, PCNA, POLE2, BRCA1, MRE11A, RPA1, RFC4, RPA3, PRKDC, POLR2G
BIDUS METASTASIS UPKIF11, RBBP4, MAD2L1, CCNB1, CENPA, PLK4, PBK, ASF1B, MCM10, RFC4, CCNA2, PRKDC, CCNB2, SFRS1, CHEK1, ZNF318, BIRC5
MOREAUX MULTIPLE MYELOMA BY TACI DNACTL6A, DDX18, ACTR6, PEX1, TMEM135, HISPPD1, DHX29, CHEK1, ORC5L, LSM5, TYMS
BENPORATH PROLIFERATIONDTL, CCNB2, TTK, MCM3, PCNA, MAD2L1, TMEM14A, CENPA, GPSM2, RFC4, BIRC5, TYMS
FERRANDO HOX11 NEIGHBORS
LIEN BREAST CARCINOMA METAPLASTIC VS DUCTAL DN
BOYAULT LIVER CANCER SUBCLASS G123 UPCCNB2, ATAD2, RFC4, TMPO, PRKDC, NT5DC2, SAC3D1
RHODES UNDIFFERENTIATED CANCER
PAL PRMT5 TARGETS UP
ODONNELL TARGETS OF MYC AND TFRC DN
REACTOME NUCLEOTIDE EXCISION REPAIRERCC8, PCNA, RPA1, RFC4, RPA3, POLE2, POLR2G
NCI VIRAL MESSENGER RNA SYNTHESIS
REACTOME GLOBAL GENOMIC NER
HOFFMANN LARGE TO SMALL PRE BII LYMPHOCYTE UP
REACTOME TRANSCRIPTION COUPLED NERPCNA, RPA1, RFC4, RPA3, POLD1, POLE2, POLR2G
NCI MITOTIC PROMETAPHASE
LE EGR2 TARGETS UP
KEGG BUTANOATE METABOLISM
NCI UNWINDING OF DNA
CORUM BRG1-ASSOCIATED COMPLEX I
REACTOME SYNTHESIS OF DNA
NCI SYNTHESIS OF DNA
NCI DUAL INCISION REACTION IN TC NER
REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA
MORI EMU MYC LYMPHOMA BY ONSET TIME UP
GARCIA TARGETS OF FLI1 AND DAX1 DN
FURUKAWA DUSP6 TARGETS PCI35 DN
BIOCARTA RANMS PATHWAY
NCI SNRNP ASSEMBLY
REACTOME E2F MEDIATED REGULATION OF DNA REPLICATION
NCI TRANSCRIPTION COUPLED NER TC NER
REACTOME MITOTIC PROMETAPHASEBUB1B, KIF18A, KIF2A, CENPI, MAD2L1, ZWINT, PLK1, CENPA, CCDC99, ITGB3BP, ZWILCH, NUP133, KNTC1, NDE1, BIRC5
NCI FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX
TOYOTA TARGETS OF MIR34B AND MIR34C
NCI DNA REPLICATION
NCI E2F TRANSCRIPTIONAL TARGETS AT G1 S
RICKMAN TUMOR DIFFERENTIATED WELL VS POORLY UP
NCI ACTIVATION OF THE PRE REPLICATIVE COMPLEX
NCI E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION
STEIN ESRRA TARGETS RESPONSIVE TO ESTROGEN DNDTL, PCNA, ATAD2, SKP2, MCM5, MLF1IP, TMPO, MANEA, CCNE2, MCM2, POLE2, MCM10
CORUM BRG1-SIN3A COMPLEX
NCI PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA
YU MYC TARGETS UPDTL, CCNB2, PCNA, E2F8, PLK1, CCNB1, BIRC5
FERREIRA EWINGS SARCOMA UNSTABLE VS STABLE UP
CHIANG LIVER CANCER SUBCLASS UNANNOTATED DN
REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION
FOURNIER ACINAR DEVELOPMENT LATE 2
REACTOME S PHASE
REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX
KEGG CELL CYCLE
MORI LARGE PRE BII LYMPHOCYTE UP
REACTOME DUAL INCISION REACTION IN TC NER
CORUM SRCAP-ASSOCIATED CHROMATIN REMODELING COMPLEX
VANTVEER BREAST CANCER METASTASIS DN
GAZDA DIAMOND BLACKFAN ANEMIA PROGENITOR DN
CORUM BRM-ASSOCIATED COMPLEX
REACTOME MITOTIC M M G1 PHASESBUB1B, KIF2A, CENPI, MAD2L1, ZWINT, MCM2, PLK1, CENPA, CCDC99, ITGB3BP, ZWILCH, NUP133, ORC5L, MCM4, KIF18A, MCM3, MCM5, KNTC1, BIRC5, NDE1
NCI MRNA SPLICING MINOR PATHWAY
STEIN ESR1 TARGETS
KEGG NUCLEOTIDE EXCISION REPAIRPCNA, POLE3, RFC4, RPA1, RPA3, POLE2
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
mycobacterium tuberculosisaeromonas caviaescherichia coliGeneSet Name
-0.00940 -0.00039 -0.00210KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP
-0.00144 -0.00037 -0.01673PUJANA_CHEK2_PCC_NETWORK
-0.00002 -0.01909 -0.00015BLUM_RESPONSE_TO_SALIRASIB_DN
-0.00051 -0.00092 -0.00959SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6
-0.01386 -0.00008 -0.01385RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN
-0.00035 -0.02805 -0.00204HORIUCHI_WTAP_TARGETS_DN
-0.00020 -0.00012 -0.00476KOBAYASHI_EGFR_SIGNALING_24HR_DN
-0.00002 -0.00221 -0.00007WINNEPENNINCKX_MELANOMA_METASTASIS_UP
-0.00038 -0.02211 -0.00029ZHANG_BREAST_CANCER_PROGENITORS_UP
-0.00002 -0.03439 -0.02897MARKEY_RB1_ACUTE_LOF_DN
-0.00260 -0.00186 -0.01283BASAKI_YBX1_TARGETS_UP
-0.00491 -0.00804 -0.00009LINDGREN_BLADDER_CANCER_CLUSTER_3_UP
-0.00113 -0.01895 -0.01491MUELLER_PLURINET
-0.00014 -0.04133 -0.00499LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN
-0.00028 -0.01738 -0.00008REACTOME_CELL_CYCLE_MITOTIC
-0.07599 -0.01335 -0.00057BOYAULT_LIVER_CANCER_SUBCLASS_G23_UP
-0.00002 -0.03706 -0.00022REACTOME_DNA_REPAIR
-0.00806 -0.00743 -0.00302BIDUS_METASTASIS_UP
-0.00807 -0.00005 -0.02459MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.03741 -0.01238 -0.00825BENPORATH_PROLIFERATION
-0.04603 -0.18908 -0.09138FERRANDO_HOX11_NEIGHBORS
-0.11834 -0.11622 -0.19434LIEN_BREAST_CARCINOMA_METAPLASTIC_VS_DUCTAL_DN
-0.00026 -0.02327 -0.02103BOYAULT_LIVER_CANCER_SUBCLASS_G123_UP
-0.00660 -0.08510 -0.01515RHODES_UNDIFFERENTIATED_CANCER
-0.01450 -0.00510 -0.10772PAL_PRMT5_TARGETS_UP
-0.03017 -0.10956 -0.00028ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN
-0.00034 -0.02788 -0.00018REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.10798 -0.00344 -0.19475NCI_VIRAL_MESSENGER_RNA_SYNTHESIS
-0.00003 -0.14426 -0.00018REACTOME_GLOBAL_GENOMIC_NER
-0.00013 -0.08582 -0.00032HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP
-0.00065 -0.01564 -0.00131REACTOME_TRANSCRIPTION_COUPLED_NER
-0.00003 -0.05777 -0.00007NCI_MITOTIC_PROMETAPHASE
-0.04583 -0.05330 -0.08018LE_EGR2_TARGETS_UP
-0.19029 -0.17445 -0.00391KEGG_BUTANOATE_METABOLISM
-0.00261 -0.09060 -0.02928NCI_UNWINDING_OF_DNA
-0.11037 -0.00745 -0.07600CORUM_BRG1-ASSOCIATED_COMPLEX_I
-0.18874 -0.13465 -0.17829REACTOME_SYNTHESIS_OF_DNA
-0.02330 -0.15502 -0.14619NCI_SYNTHESIS_OF_DNA
-0.03560 -0.01903 -0.17487NCI_DUAL_INCISION_REACTION_IN_TC_NER
-0.02022 -0.00110 -0.19953REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
-0.12221 -0.03498 -0.01552MORI_EMU_MYC_LYMPHOMA_BY_ONSET_TIME_UP
-0.06620 -0.08280 -0.00496GARCIA_TARGETS_OF_FLI1_AND_DAX1_DN
-0.00012 -0.06045 -0.00007FURUKAWA_DUSP6_TARGETS_PCI35_DN
-0.05280 -0.12223 -0.14200BIOCARTA_RANMS_PATHWAY
-0.03485 -0.00701 -0.18300NCI_SNRNP_ASSEMBLY
-0.03699 -0.12581 -0.01488REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION
-0.03470 -0.01764 -0.17458NCI_TRANSCRIPTION_COUPLED_NER__TC_NER_
-0.00015 -0.01572 -0.00002REACTOME_MITOTIC_PROMETAPHASE
-0.04537 -0.01902 -0.19313NCI_FORMATION_OF_TRANSCRIPTION_COUPLED_NER__TC_NER__REPAIR_COMPLEX
-0.00441 -0.19413 -0.00006TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C
-0.02671 -0.15125 -0.14152NCI_DNA_REPLICATION
-0.10456 -0.09146 -0.18074NCI_E2F_TRANSCRIPTIONAL_TARGETS_AT_G1_S
-0.05761 -0.17884 -0.05317RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_UP
-0.00002 -0.14042 -0.00008NCI_ACTIVATION_OF_THE_PRE_REPLICATIVE_COMPLEX
-0.08439 -0.17335 -0.03248NCI_E2F_ENABLED_INHIBITION_OF_PRE_REPLICATION_COMPLEX_FORMATION
-0.00090 -0.01329 -0.02462STEIN_ESRRA_TARGETS_RESPONSIVE_TO_ESTROGEN_DN
-0.05240 -0.09286 -0.01671CORUM_BRG1-SIN3A_COMPLEX
-0.10453 -0.01716 -0.19450NCI_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
-0.00255 -0.00075 -0.00179YU_MYC_TARGETS_UP
-0.00357 -0.15511 -0.00253FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS_STABLE_UP
-0.14510 -0.00408 -0.01548CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN
-0.18277 -0.05536 -0.00961REACTOME_E2F_ENABLED_INHIBITION_OF_PRE_REPLICATION_COMPLEX_FORMATION
-0.09804 -0.00027 -0.09170FOURNIER_ACINAR_DEVELOPMENT_LATE_2
-0.14471 -0.05997 -0.17828REACTOME_S_PHASE
-0.00006 -0.13010 -0.00002REACTOME_ACTIVATION_OF_THE_PRE_REPLICATIVE_COMPLEX
-0.06629 -0.16594 -0.01211KEGG_CELL_CYCLE
-0.00009 -0.08123 -0.00006MORI_LARGE_PRE_BII_LYMPHOCYTE_UP
-0.04734 -0.01915 -0.19277REACTOME_DUAL_INCISION_REACTION_IN_TC_NER
-0.01842 -0.03485 -0.14194CORUM_SRCAP-ASSOCIATED_CHROMATIN_REMODELING_COMPLEX
-0.15585 -0.00876 -0.00298VANTVEER_BREAST_CANCER_METASTASIS_DN
-0.00051 -0.09718 -0.10960GAZDA_DIAMOND_BLACKFAN_ANEMIA_PROGENITOR_DN
-0.09784 -0.06934 -0.02469CORUM_BRM-ASSOCIATED_COMPLEX
-0.06598 -0.02749 -0.00211REACTOME_MITOTIC_M_M_G1_PHASES
-0.01368 -0.00883 -0.16916NCI_MRNA_SPLICING___MINOR_PATHWAY
-0.07771 -0.05930 -0.07123STEIN_ESR1_TARGETS
-0.00038 -0.02124 -0.00032KEGG_NUCLEOTIDE_EXCISION_REPAIR