BICLUSTER_ID : DNREG-198
PATHOGENS /5/ : pseudomonas aeruginosa,staphylococcus aureus,aggregatibacter actinomycetemcomitans,mycobacterium tuberculosis,helicobacter pylori
TARGETS /0/ :
Gene SetLeading Edge Genes
LINDGREN BLADDER CANCER CLUSTER 3 UPPCNA, MLF1IP, TMPO, CCNB1, STMN1, CENPA, TOP2A, CENPF, RACGAP1, CCNB2, MNS1, H2AFV, TACC3, PRC1, KIF2C, BIRC5
REACTOME CELL CYCLE MITOTICBUB1B, KIF20A, PCNA, MLF1IP, CCNB1, CENPA, ODF2, KIF2C, CENPF, BIRC5
CHEMNITZ RESPONSE TO PROSTAGLANDIN E2 UP
WU APOPTOSIS BY CDKN1A VIA TP53
LI WILMS TUMOR VS FETAL KIDNEY 1 DN
BENPORATH CYCLING GENES
REACTOME REPAIR SYNTHESIS OF PATCH 27 30 BASES LONG BY DNA POLYMERASE
NCI AURORA B PATHWAY
ODONNELL TARGETS OF MYC AND TFRC DN
MOLENAAR TARGETS OF CCND1 AND CDK4 DN
REACTOME NUCLEOTIDE EXCISION REPAIR
REACTOME MITOTIC PROMETAPHASE
WINNEPENNINCKX MELANOMA METASTASIS UP
REACTOME GLOBAL GENOMIC NER
NCI REPAIR SYNTHESIS FOR GAP FILLING BY DNA POLYMERASE IN TC NER
MUELLER PLURINET
MARKEY RB1 ACUTE LOF DNKIF20A, NUSAP1, RACGAP1, PCNA, TMPO, CCNB1, CENPA, DNAJC9, H2AFV, PRC1, BIRC5
MANALO HYPOXIA DN
ZHANG BREAST CANCER PROGENITORS UP
BLUM RESPONSE TO SALIRASIB DNPXMP2, BUB1B, KIF20A, RFC3, PCNA, TMPO, GALNT1, CENPA, PBK, HMMR, TOP2A, CENPF, NUSAP1, TPX2, CDC25C, H2AFV, PRC1, KIF2C
HOFFMANN LARGE TO SMALL PRE BII LYMPHOCYTE UP
REACTOME TRANSCRIPTION COUPLED NER
REN BOUND BY E2F
YU MYC TARGETS UPCDKN3, KIF20A, RACGAP1, PCNA, CCNB1, BIRC5
NCI MITOTIC PROMETAPHASE
BOYAULT LIVER CANCER SUBCLASS G23 UP
CHIANG LIVER CANCER SUBCLASS PROLIFERATION UP
RUIZ TNC TARGETS DN
FOURNIER ACINAR DEVELOPMENT LATE 2
NCI REPAIR SYNTHESIS OF PATCH 27 30 BASES LONG BY DNA POLYMERASE
REACTOME S PHASE
MORI LARGE PRE BII LYMPHOCYTE UP
CHANG CYCLING GENESTACC3, CENPA
VANTVEER BREAST CANCER METASTASIS DN
REACTOME SYNTHESIS OF DNA
SHEDDEN LUNG CANCER POOR SURVIVAL A6
PUJANA BREAST CANCER WITH BRCA1 MUTATED UP
AMUNDSON GAMMA RADIATION RESPONSE
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
helicobacter pylori kx2 npgecpseudomonas aeruginosa fdr440staphylococcus aureusmycobacterium tuberculosishelicobacter pylori kx1 npgecaggregatibacter actinomycetemcomitansGeneSet Name
-0.00379 -0.10513 -0.00561 -0.00491 -0.00109 -0.00227LINDGREN_BLADDER_CANCER_CLUSTER_3_UP
-0.00105 -0.00616 -0.01121 -0.00028 -0.00054 -0.01005REACTOME_CELL_CYCLE_MITOTIC
-0.01724 -0.01049 -0.04929 -0.00932 -0.01143 -0.12795CHEMNITZ_RESPONSE_TO_PROSTAGLANDIN_E2_UP
-0.07492 -0.05184 -0.07330 -0.00107 -0.01536 -0.02023WU_APOPTOSIS_BY_CDKN1A_VIA_TP53
-0.02224 -0.03186 -0.09147 -0.00014 -0.01328 -0.14017LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN
-0.02705 -0.04557 -0.03303 -0.04552 -0.01003 -0.00307BENPORATH_CYCLING_GENES
-0.01594 -0.11126 -0.13738 -0.00001 -0.05940 -0.12570REACTOME_REPAIR_SYNTHESIS_OF_PATCH_27_30_BASES_LONG_BY_DNA_POLYMERASE
-0.01193 -0.13036 -0.13467 -0.00991 -0.02493 -0.00072NCI_AURORA_B_PATHWAY
-0.08707 -0.00593 -0.19943 -0.03017 -0.02871 -0.00563ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN
-0.00059 -0.07519 -0.08972 -0.00064 -0.01373 -0.03509MOLENAAR_TARGETS_OF_CCND1_AND_CDK4_DN
-0.09745 -0.00513 -0.09375 -0.00034 -0.07672 -0.00561REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.00148 -0.16847 -0.05490 -0.00015 -0.00233 -0.06546REACTOME_MITOTIC_PROMETAPHASE
-0.00153 -0.00990 -0.00025 -0.00002 -0.00684 -0.00130WINNEPENNINCKX_MELANOMA_METASTASIS_UP
-0.08982 -0.00065 -0.14825 -0.00003 -0.06173 -0.12872REACTOME_GLOBAL_GENOMIC_NER
-0.01553 -0.12007 -0.14370 -0.00004 -0.05413 -0.12874NCI_REPAIR_SYNTHESIS_FOR_GAP_FILLING_BY_DNA_POLYMERASE_IN_TC_NER
-0.07611 -0.14959 -0.00302 -0.00113 -0.10442 -0.04867MUELLER_PLURINET
-0.00537 -0.07746 -0.01122 -0.00002 -0.00100 -0.00587MARKEY_RB1_ACUTE_LOF_DN
-0.02679 -0.14929 -0.00136 -0.00001 -0.05884 -0.09773MANALO_HYPOXIA_DN
-0.04272 -0.02082 -0.01024 -0.00038 -0.01156 -0.01073ZHANG_BREAST_CANCER_PROGENITORS_UP
-0.01232 -0.01451 -0.00293 -0.00002 -0.00297 -0.00008BLUM_RESPONSE_TO_SALIRASIB_DN
-0.00203 -0.02516 -0.04241 -0.00013 -0.00059 -0.02363HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP
-0.12290 -0.01975 -0.10346 -0.00065 -0.06469 -0.00673REACTOME_TRANSCRIPTION_COUPLED_NER
-0.01436 -0.00103 -0.01841 -0.00002 -0.01817 -0.02215REN_BOUND_BY_E2F
-0.00132 -0.04480 -0.01271 -0.00255 -0.00084 -0.00022YU_MYC_TARGETS_UP
-0.00583 -0.17181 -0.05445 -0.00003 -0.00299 -0.16560NCI_MITOTIC_PROMETAPHASE
-0.17014 -0.15757 -0.04362 -0.07599 -0.02927 -0.12897BOYAULT_LIVER_CANCER_SUBCLASS_G23_UP
-0.00492 -0.09011 -0.08872 -0.05889 -0.00105 -0.00051CHIANG_LIVER_CANCER_SUBCLASS_PROLIFERATION_UP
-0.05075 -0.14933 -0.01626 -0.06158 -0.02163 -0.00315RUIZ_TNC_TARGETS_DN
-0.00795 -0.16190 -0.00173 -0.09804 -0.00300 -0.07933FOURNIER_ACINAR_DEVELOPMENT_LATE_2
-0.01622 -0.11166 -0.13754 -0.00004 -0.05073 -0.12589NCI_REPAIR_SYNTHESIS_OF_PATCH__27_30_BASES_LONG__BY_DNA_POLYMERASE
-0.00017 -0.01808 -0.00011 -0.14471 -0.00088 -0.00982REACTOME_S_PHASE
-0.01198 -0.00134 -0.06142 -0.00009 -0.01648 -0.04933MORI_LARGE_PRE_BII_LYMPHOCYTE_UP
-0.00078 -0.05122 -0.00670 -0.01938 -0.00462 -0.00321CHANG_CYCLING_GENES
-0.11662 -0.01534 -0.13046 -0.15585 -0.08145 -0.06593VANTVEER_BREAST_CANCER_METASTASIS_DN
-0.00016 -0.02563 -0.00014 -0.18874 -0.00059 -0.02170REACTOME_SYNTHESIS_OF_DNA
-0.02761 -0.16572 -0.00265 -0.00051 -0.03282 -0.00025SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6
-0.02447 -0.00698 -0.10581 -0.00001 -0.00905 -0.06379PUJANA_BREAST_CANCER_WITH_BRCA1_MUTATED_UP
-0.00005 -0.04433 -0.08951 -0.00291 -0.00300 -0.00661AMUNDSON_GAMMA_RADIATION_RESPONSE