BICLUSTER_ID : DNREG-200
PATHOGENS /4/ : escherichia coli,bifidobacterium bifidum,lactobacillus acidophilus,aeromonas caviae
TARGETS /19/ : MGST3, HPRT1, PYCR2, IARS2, GMDS, PSAT1, NDUFB5, UQCRC1, APEX1, PET112L, SLC29A1, IFNGR1, ME2, IDH1, NAGS, TK1, HSD17B4, NDUFA12, DHCR7
Gene SetLeading Edge Genes
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UPELOVL6, MGST3, NUDCD2, ZMAT3, PYCR2, IARS2, RIOK2, GMDS, ZCCHC17, HTATSF1, NDUFB5, UCHL5, ICT1, HSPA14, BOLA1, MID1IP1, LGTN, APEX1, MCM3, ACTL6A, CHCHD1, YIF1B, MCM5, MRPS18B, CKS2, NAGS, TERF2, RNASEH2A, TK1, XRCC6BP1, STT3B, TSPAN14, ARV1, NDUFA12, RANBP6, RPP21, HPRT1, LMNA, RBBP7, RFC4, RPA3, CCNA2, CD93, MCM4, MRPL18, DTL, SLC9A6, GMNN, EIF2B1, MSH6, DNAJC19, IDH1, MDC1, DNAJC9, RPA1, RCN2, DEPDC6, TMEM14C
SPIELMAN LYMPHOBLAST EUROPEAN VS ASIAN UPGIPC1, UCP2, TXN2, UQCRC1, PET112L, ACTL6A, RECQL4, IFNGR1, DHCR24, PSMC3IP, TM6SF1, CKS2, ARHGAP1, HSD17B4, DHCR7, EBP, HMBS
UDAYAKUMAR MED1 TARGETS UPOGG1, MTDH, SLC29A1, ME2, POLR3G, DICER1, THOP1, PSAT1, MRPL12, NUBP2, SDF2L1, DUS1L, EML4, ZMYND11, ANP32E
CHIANG LIVER CANCER SUBCLASS UNANNOTATED DNCCNB2, GMNN, FKBP11, ACTR6, MAD2L1, SLC29A1, ME2, POLE2, PBK, RNASEH2A, RFC4, RPA3, BAG2, RCN2
NCI TRANSFORMATION OF LANOSTEROL TO CHOLESTEROL
BENPORATH MYC MAX TARGETS
FERRANDO HOX11 NEIGHBORS
BORCZUK MALIGNANT MESOTHELIOMA UP
KEGG PEROXISOME
BOYAULT LIVER CANCER SUBCLASS G123 UP
BIOCARTA RANMS PATHWAY
REACTOME CELL CYCLE CHECKPOINTS
RHODES UNDIFFERENTIATED CANCER
DING LUNG CANCER EXPRESSION BY COPY NUMBER
NCI TRANSCRIPTION COUPLED NER TC NER
STEIN ESRRA TARGETS
REACTOME NUCLEOTIDE EXCISION REPAIRRPA1, RFC4, RPA3, POLE2, CCNH
CAFFAREL RESPONSE TO THC DN
NCI FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX
REACTOME GLOBAL GENOMIC NER
KEGG PROPANOATE METABOLISM
NCI DNA REPLICATION
NCI E2F TRANSCRIPTIONAL TARGETS AT G1 S
RICKMAN TUMOR DIFFERENTIATED WELL VS POORLY UP
NCI E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION
REACTOME METABOLISM OF CARBOHYDRATES
RICKMAN METASTASIS UP
REACTOME TRANSCRIPTION COUPLED NERRPA1, RFC4, RPA3, POLD1, POLE2, CCNH
NCI PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA
KEGG N GLYCAN BIOSYNTHESIS
NCI CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION
MORI MATURE B LYMPHOCYTE DN
WEST ADRENOCORTICAL TUMOR UP
KEGG BIOSYNTHESIS OF UNSATURATED FATTY ACIDS
CORUM RNASE/MRP COMPLEX
REACTOME CHOLESTEROL BIOSYNTHESIS
BOYAULT LIVER CANCER SUBCLASS G23 UPSMC2, TUBG1, MCM3, SLC38A1, CCNE2, DBF4, CENPA
REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION
REACTOME G1 S TRANSITION
NCI UNWINDING OF DNA
REACTOME PYRUVATE METABOLISM AND TCA CYCLE
REACTOME DUAL INCISION REACTION IN TC NER
AGUIRRE PANCREATIC CANCER COPY NUMBER UP
MOREAUX MULTIPLE MYELOMA BY TACI DN
BIOCARTA AKAP95 PATHWAY
CORUM SRCAP-ASSOCIATED CHROMATIN REMODELING COMPLEX
BOYAULT LIVER CANCER SUBCLASS G3 UPTTK, ACTL6A, TBL1XR1, MAD2L1, DUSP3, ZWILCH, HMMR, EML4, TOPBP1, CCNA2, ANP32E
SESTO RESPONSE TO UV C6
REACTOME SYNTHESIS OF DNA
NCI SYNTHESIS OF DNA
REACTOME DNA REPLICATION PRE INITIATION
REACTOME TRANSFORMATION OF LANOSTEROL TO CHOLESTEROL
NCI DUAL INCISION REACTION IN TC NER
STEIN ESR1 TARGETS
MORI EMU MYC LYMPHOMA BY ONSET TIME UP
KEGG NUCLEOTIDE EXCISION REPAIR
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
lactobacillus acidophilusbifidobacterium bifidumaeromonas caviaescherichia coliGeneSet Name
-0.00129 -0.00072 -0.00040 -0.03431ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.00055 -0.00023 -0.00479 -0.10364SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP
-0.00066 -0.00182 -0.00134 -0.07354UDAYAKUMAR_MED1_TARGETS_UP
-0.00561 -0.00019 -0.00408 -0.01548CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN
-0.00124 -0.00385 -0.03487 -0.03360NCI_TRANSFORMATION_OF_LANOSTEROL_TO_CHOLESTEROL
-0.01279 -0.01077 -0.02326 -0.12362BENPORATH_MYC_MAX_TARGETS
-0.02052 -0.00477 -0.18908 -0.09138FERRANDO_HOX11_NEIGHBORS
-0.00187 -0.00139 -0.00026 -0.14538BORCZUK_MALIGNANT_MESOTHELIOMA_UP
-0.10237 -0.17256 -0.06760 -0.00379KEGG_PEROXISOME
-0.09604 -0.05508 -0.02327 -0.02103BOYAULT_LIVER_CANCER_SUBCLASS_G123_UP
-0.09587 -0.02126 -0.12223 -0.14200BIOCARTA_RANMS_PATHWAY
-0.00613 -0.00026 -0.12741 -0.03627REACTOME_CELL_CYCLE_CHECKPOINTS
-0.00080 -0.00003 -0.08510 -0.01515RHODES_UNDIFFERENTIATED_CANCER
-0.19751 -0.07736 -0.01153 -0.06348DING_LUNG_CANCER_EXPRESSION_BY_COPY_NUMBER
-0.04150 -0.11001 -0.01764 -0.17458NCI_TRANSCRIPTION_COUPLED_NER__TC_NER_
-0.00110 -0.00423 -0.00014 -0.16117STEIN_ESRRA_TARGETS
-0.00033 -0.00004 -0.02788 -0.00018REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.01395 -0.00190 -0.00401 -0.16909CAFFAREL_RESPONSE_TO_THC_DN
-0.04376 -0.11951 -0.01902 -0.19313NCI_FORMATION_OF_TRANSCRIPTION_COUPLED_NER__TC_NER__REPAIR_COMPLEX
-0.00101 -0.00003 -0.14426 -0.00018REACTOME_GLOBAL_GENOMIC_NER
-0.02277 -0.09374 -0.01907 -0.00176KEGG_PROPANOATE_METABOLISM
-0.03064 -0.01085 -0.15125 -0.14152NCI_DNA_REPLICATION
-0.01184 -0.00002 -0.09146 -0.18074NCI_E2F_TRANSCRIPTIONAL_TARGETS_AT_G1_S
-0.06171 -0.02139 -0.17884 -0.05317RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_UP
-0.03972 -0.19704 -0.17335 -0.03248NCI_E2F_ENABLED_INHIBITION_OF_PRE_REPLICATION_COMPLEX_FORMATION
-0.03923 -0.07444 -0.02017 -0.02659REACTOME_METABOLISM_OF_CARBOHYDRATES
-0.02371 -0.06510 -0.04631 -0.01546RICKMAN_METASTASIS_UP
-0.00076 -0.00003 -0.01564 -0.00131REACTOME_TRANSCRIPTION_COUPLED_NER
-0.00512 -0.00077 -0.01716 -0.19450NCI_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
-0.00334 -0.02164 -0.08195 -0.12549KEGG_N_GLYCAN_BIOSYNTHESIS
-0.01573 -0.00695 -0.10842 -0.17317NCI_CYCLIN_A_B1_ASSOCIATED_EVENTS_DURING_G2_M_TRANSITION
-0.05857 -0.00292 -0.04616 -0.10957MORI_MATURE_B_LYMPHOCYTE_DN
-0.00173 -0.00673 -0.00123 -0.10340WEST_ADRENOCORTICAL_TUMOR_UP
-0.01320 -0.06641 -0.05335 -0.15291KEGG_BIOSYNTHESIS_OF_UNSATURATED_FATTY_ACIDS
-0.03299 -0.06701 -0.09097 -0.03878CORUM_RNASE/MRP_COMPLEX
-0.00604 -0.06933 -0.00074 -0.01316REACTOME_CHOLESTEROL_BIOSYNTHESIS
-0.00067 -0.00003 -0.01335 -0.00057BOYAULT_LIVER_CANCER_SUBCLASS_G23_UP
-0.02385 -0.12386 -0.05536 -0.00961REACTOME_E2F_ENABLED_INHIBITION_OF_PRE_REPLICATION_COMPLEX_FORMATION
-0.00092 -0.00002 -0.03437 -0.15306REACTOME_G1_S_TRANSITION
-0.00096 -0.00503 -0.09060 -0.02928NCI_UNWINDING_OF_DNA
-0.00014 -0.00015 -0.00003 -0.16770REACTOME_PYRUVATE_METABOLISM_AND_TCA_CYCLE
-0.04348 -0.11668 -0.01915 -0.19277REACTOME_DUAL_INCISION_REACTION_IN_TC_NER
-0.09091 -0.05690 -0.19010 -0.14397AGUIRRE_PANCREATIC_CANCER_COPY_NUMBER_UP
-0.01167 -0.00105 -0.00005 -0.02459MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.12246 -0.13191 -0.12028 -0.09967BIOCARTA_AKAP95_PATHWAY
-0.08399 -0.04765 -0.03485 -0.14194CORUM_SRCAP-ASSOCIATED_CHROMATIN_REMODELING_COMPLEX
-0.00011 -0.00018 -0.00003 -0.05717BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP
-0.01350 -0.00481 -0.00501 -0.19455SESTO_RESPONSE_TO_UV_C6
-0.03098 -0.00140 -0.13465 -0.17829REACTOME_SYNTHESIS_OF_DNA
-0.02542 -0.01158 -0.15502 -0.14619NCI_SYNTHESIS_OF_DNA
-0.01571 -0.00189 -0.12621 -0.19797REACTOME_DNA_REPLICATION_PRE_INITIATION
-0.00068 -0.00352 -0.03465 -0.03446REACTOME_TRANSFORMATION_OF_LANOSTEROL_TO_CHOLESTEROL
-0.04224 -0.10993 -0.01903 -0.17487NCI_DUAL_INCISION_REACTION_IN_TC_NER
-0.01528 -0.00142 -0.05930 -0.07123STEIN_ESR1_TARGETS
-0.02388 -0.00150 -0.03498 -0.01552MORI_EMU_MYC_LYMPHOMA_BY_ONSET_TIME_UP
-0.00448 -0.00238 -0.02124 -0.00032KEGG_NUCLEOTIDE_EXCISION_REPAIR