BICLUSTER_ID : DNREG-212
PATHOGENS /3/ : staphylococcus aureus,aggregatibacter actinomycetemcomitans,helicobacter pylori
TARGETS /18/ : HDAC1, CKB, TGFBR2, BACE1, CALM3, PAPSS1, NDUFB8, S100A13, TUBB3, CYB5A, NDUFB3, APEX1, GAMT, TUBB, NQO1, SUCLG1, TUBB2C, TK1
Gene SetLeading Edge Genes
BLUM RESPONSE TO SALIRASIB DNKIF20A, HDAC1, HN1, TMPO, PLK1, HSPA2, GALNT1, STMN1, TUBB3, AURKB, CENPA, CENPF, GAMT, MSH2, TUBB, UBE2C, DHCR24, RNASEH2A, TK1, PXMP2, CKB, BUB1B, MAPRE2, CCNA2, CYB5A, NDUFB3, CDC20, ID1, TPX2, CDC25C, ATP5G3, TUBB2C, PRDX3, H2AFV, CRIP2, TWSG1, SLC9A3R1, KIF2C
REN ALVEOLAR RHABDOMYOSARCOMA DNBACE1, TGFBR2, CLIC1, SEC61B, PAPSS1, PTRF, S100A13, GALNT1, ADAM10, ACTR2, AP2M1, ARPC5, NTAN1, ARPC3, NQO1, TUSC3, LXN
PAL PRMT5 TARGETS UPKIF20A, ARL2BP, HN1, CALM3, CETN2, TMPO, NDUFB8, PSMC3, STMN1, AURKB, H2AFX, EMP3, RACGAP1, APEX1, CDC20, PSMD6, CDC25C, SPCS2, H2AFV, TACC3, TUBB2A
LINDGREN BLADDER CANCER CLUSTER 3 UPTMPO, PLK1, CCNB1, STMN1, CENPA, CENPF, DBI, CCNB2, RACGAP1, NEDD9, INSIG1, MSH2, UBE2C, SUCLG1, H2AFV, MELK, RNASEH2A, TK1, TACC3, IDH2, TWSG1, KIF2C, TFG, BIRC5
GRAHAM CML DIVIDING VS NORMAL QUIESCENT UPBUB1B, KIF20A, CCNB1, STMN1, AURKB, CENPA, H2AFX, MRPS15, CCNA2, RACGAP1, CDC20, TPX2, UBE2C, ATP5G3, RNASEH2A, TK1, TUBB6, IDH2, NT5DC2, KIF2C, BIRC5, ASPM
REACTOME CELL CYCLE MITOTIC
BORCZUK MALIGNANT MESOTHELIOMA UP
BENPORATH CYCLING GENES
BHATTACHARYA EMBRYONIC STEM CELL
MITSIADES RESPONSE TO APLIDIN DN
RHODES UNDIFFERENTIATED CANCER
WHITEFORD PEDIATRIC CANCER MARKERS
ALONSO METASTASIS UP
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 12
MORI IMMATURE B LYMPHOCYTE DN
NCI AURORA B PATHWAY
ODONNELL TARGETS OF MYC AND TFRC DN
NCI PLK1 PATHWAY
KEGG PARKINSONS DISEASE
ZHAN MULTIPLE MYELOMA PR UP
SANA RESPONSE TO IFNG DN
KEGG HUNTINGTONS DISEASE
NATSUME RESPONSE TO INTERFERON BETA DN
LEE LIVER CANCER SURVIVAL DN
NUYTTEN EZH2 TARGETS DN
MARKEY RB1 ACUTE LOF DN
MUELLER PLURINET
HOFFMANN LARGE TO SMALL PRE BII LYMPHOCYTE UP
CORUM PA28-20S PROTEASOME
FINETTI BREAST CANCER BASAL VS LUMINAL
YU MYC TARGETS UP
CROONQUIST NRAS SIGNALING DN
CROONQUIST IL6 DEPRIVATION DN
CHIANG LIVER CANCER SUBCLASS PROLIFERATION UP
MORI LARGE PRE BII LYMPHOCYTE UP
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UP
FINETTI BREAST CANCER KINOME RED
REACTOME RNA POLYMERASE I PROMOTER OPENING
CHANG CYCLING GENESMELK, TACC3, ILF2, UBE2C, TSN, CENPA
FARMER BREAST CANCER CLUSTER 2
SCIBETTA KDM5B TARGETS DN
BENPORATH PROLIFERATION
GOLDRATH ANTIGEN RESPONSE
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
helicobacter pylori kx2 npgecstaphylococcus aureushelicobacter pylori kx2 mgephelicobacter pylori kx1 npgecaggregatibacter actinomycetemcomitansGeneSet Name
-0.01232 -0.00293 -0.01179 -0.00297 -0.00008BLUM_RESPONSE_TO_SALIRASIB_DN
-0.00002 -0.01031 -0.00154 -0.00034 -0.04272REN_ALVEOLAR_RHABDOMYOSARCOMA_DN
-0.00055 -0.00128 -0.01474 -0.00038 -0.00051PAL_PRMT5_TARGETS_UP
-0.00379 -0.00561 -0.06290 -0.00109 -0.00227LINDGREN_BLADDER_CANCER_CLUSTER_3_UP
-0.00187 -0.00589 -0.08392 -0.00058 -0.00007GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP
-0.00105 -0.01121 -0.13703 -0.00054 -0.01005REACTOME_CELL_CYCLE_MITOTIC
-0.00017 -0.00005 -0.04124 -0.00038 -0.00036BORCZUK_MALIGNANT_MESOTHELIOMA_UP
-0.02705 -0.03303 -0.16095 -0.01003 -0.00307BENPORATH_CYCLING_GENES
-0.01840 -0.01053 -0.12498 -0.02516 -0.19173BHATTACHARYA_EMBRYONIC_STEM_CELL
-0.00683 -0.00224 -0.07340 -0.00925 -0.06871MITSIADES_RESPONSE_TO_APLIDIN_DN
-0.00065 -0.16035 -0.05496 -0.00202 -0.00010RHODES_UNDIFFERENTIATED_CANCER
-0.00648 -0.00027 -0.10659 -0.00303 -0.00052WHITEFORD_PEDIATRIC_CANCER_MARKERS
-0.01661 -0.00010 -0.19829 -0.00963 -0.00933ALONSO_METASTASIS_UP
-0.00372 -0.02687 -0.00021 -0.00233 -0.19389YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_12
-0.02413 -0.11163 -0.05716 -0.00202 -0.00118MORI_IMMATURE_B_LYMPHOCYTE_DN
-0.01193 -0.13467 -0.02249 -0.02493 -0.00072NCI_AURORA_B_PATHWAY
-0.08707 -0.19943 -0.07147 -0.02871 -0.00563ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN
-0.00213 -0.11266 -0.10251 -0.01899 -0.09503NCI_PLK1_PATHWAY
-0.00236 -0.00034 -0.01552 -0.00043 -0.01663KEGG_PARKINSONS_DISEASE
-0.06073 -0.19936 -0.07914 -0.06738 -0.00046ZHAN_MULTIPLE_MYELOMA_PR_UP
-0.00979 -0.00065 -0.15550 -0.00182 -0.03439SANA_RESPONSE_TO_IFNG_DN
-0.00684 -0.00320 -0.08702 -0.00043 -0.00352KEGG_HUNTINGTONS_DISEASE
-0.01399 -0.02307 -0.12425 -0.01163 -0.18087NATSUME_RESPONSE_TO_INTERFERON_BETA_DN
-0.00657 -0.00026 -0.06341 -0.00959 -0.00031LEE_LIVER_CANCER_SURVIVAL_DN
-0.01414 -0.01504 -0.08461 -0.00564 -0.12376NUYTTEN_EZH2_TARGETS_DN
-0.00537 -0.01122 -0.17066 -0.00100 -0.00587MARKEY_RB1_ACUTE_LOF_DN
-0.07611 -0.00302 -0.19639 -0.10442 -0.04867MUELLER_PLURINET
-0.00203 -0.04241 -0.06999 -0.00059 -0.02363HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP
-0.00004 -0.00358 -0.12052 -0.00585 -0.01214CORUM_PA28-20S_PROTEASOME
-0.03351 -0.11750 -0.08225 -0.07930 -0.01024FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL
-0.00132 -0.01271 -0.18499 -0.00084 -0.00022YU_MYC_TARGETS_UP
-0.00729 -0.00461 -0.13075 -0.00331 -0.00156CROONQUIST_NRAS_SIGNALING_DN
-0.00206 -0.01378 -0.07941 -0.00330 -0.00045CROONQUIST_IL6_DEPRIVATION_DN
-0.00492 -0.08872 -0.00777 -0.00105 -0.00051CHIANG_LIVER_CANCER_SUBCLASS_PROLIFERATION_UP
-0.01198 -0.06142 -0.00633 -0.01648 -0.04933MORI_LARGE_PRE_BII_LYMPHOCYTE_UP
-0.00489 -0.00628 -0.06916 -0.00733 -0.07824ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.02908 -0.08255 -0.08048 -0.07132 -0.02729FINETTI_BREAST_CANCER_KINOME_RED
-0.04833 -0.03547 -0.08453 -0.00298 -0.04269REACTOME_RNA_POLYMERASE_I_PROMOTER_OPENING
-0.00078 -0.00670 -0.01360 -0.00462 -0.00321CHANG_CYCLING_GENES
-0.00412 -0.10371 -0.08721 -0.00939 -0.00225FARMER_BREAST_CANCER_CLUSTER_2
-0.00149 -0.11866 -0.12404 -0.00090 -0.04657SCIBETTA_KDM5B_TARGETS_DN
-0.00449 -0.00003 -0.17038 -0.00727 -0.00048BENPORATH_PROLIFERATION
-0.02222 -0.03417 -0.08413 -0.00903 -0.14192GOLDRATH_ANTIGEN_RESPONSE