BICLUSTER_ID : DNREG-244
PATHOGENS /4/ : pseudomonas aeruginosa,staphylococcus aureus,helicobacter pylori,burkholderia pseudomallei
TARGETS /14/ : SQLE, SC4MOL, DDAH1, GMPS, ACAT2, HADHA, ERGIC2, SDHA, MCM6, GLO1, ASRGL1, TK1, DCI, DHCR7
Gene SetLeading Edge Genes
CASORELLI ACUTE PROMYELOCYTIC LEUKEMIA DNKIF20A, SQLE, RFC3, RRM2, PRDX4, CCNB1, SDHA, CENPA, TOP2A, CENPF, SCD, NGFRAP1, NCAPH, NUSAP1, DDAH1, MCM3, GMPS, CDC6, TUFM, TK1, CIRBP, ASPM, BUB1B, ASH2L, HIRIP3, CDC45L, CSE1L, HMMR, DCI, PDIA3, CCNB2, SC4MOL, RAD54L, ACAT2, NUDT1, CDC25C, HADHA, CCT5, GLO1, DNAJC9, NONO, FDFT1, RPA1, PRC1, ACLY, ELOVL5, KIF2C, DHCR7, BIRC5
NUYTTEN EZH2 TARGETS DNKIF20A, SET, RRM2, MLF1IP, TMPO, PRPS2, RAD51C, CCNB1, GLT8D1, CENPA, PBK, GIT2, RFC5, TOP2A, TOPBP1, CENPF, CNOT1, NCAPH, DDAH1, SP3, EXOSC8, EIF4EBP2, MRP63, NDUFB11, HMBS, ASPM, ERGIC2, FANCG, DDHD2, CSE1L, GNPAT, ASRGL1, MDFIC, H2AFX, RFC4, HMMR, GALK2, HMGB1, ADD3, GMNN, CCNB2, RACGAP1, PSPH, TPX2, TBL1X, MBTPS1, H2AFV, PRC1, KIF2C, OSGEPL1, PRIM1, BIRC5
REACTOME CELL CYCLE CHECKPOINTSBUB1B, RFC3, CCNB2, MCM3, CDC25C, CDC6, CCNB1, MCM6, RPA1, RFC4, ANAPC5
REACTOME CELL CYCLE MITOTIC
REACTOME LAGGING STRAND SYNTHESIS
WU APOPTOSIS BY CDKN1A VIA TP53
MONTERO THYROID CANCER POOR SURVIVAL UP
BENPORATH CYCLING GENES
NCI REMOVAL OF THE FLAP INTERMEDIATE
REACTOME REPAIR SYNTHESIS OF PATCH 27 30 BASES LONG BY DNA POLYMERASE
ODONNELL TARGETS OF MYC AND TFRC DN
WAKASUGI HAVE ZNF143 BINDING SITES
KEGG PARKINSONS DISEASE
REACTOME NUCLEOTIDE EXCISION REPAIR
REACTOME MITOTIC PROMETAPHASE
CORUM F1F0-ATP SYNTHASE EC 3.6.3.14 MITOCHONDRIAL
MODY HIPPOCAMPUS PRENATAL
REACTOME GLOBAL GENOMIC NER
NCI REPAIR SYNTHESIS FOR GAP FILLING BY DNA POLYMERASE IN TC NER
REACTOME DNA STRAND ELONGATION
MUELLER PLURINET
KEGG PROPANOATE METABOLISM
TOYOTA TARGETS OF MIR34B AND MIR34C
RICKMAN TUMOR DIFFERENTIATED WELL VS POORLY UP
REACTOME EXTENSION OF TELOMERES
REACTOME TRANSCRIPTION COUPLED NER
POMEROY MEDULLOBLASTOMA PROGNOSIS DN
VERNELL RETINOBLASTOMA PATHWAY UP
REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS
NCI LEADING STRAND SYNTHESIS
NCI MITOTIC PROMETAPHASE
REACTOME REMOVAL OF THE FLAP INTERMEDIATE
RUIZ TNC TARGETS DN
ZHONG RESPONSE TO AZACITIDINE AND TSA DN
REACTOME G1 S TRANSITION
CORUM DNA SYNTHESOME COMPLEX 13 SUBUNITS
NCI TELOMERE C STRAND LAGGING STRAND SYNTHESIS
NCI REPAIR SYNTHESIS OF PATCH 27 30 BASES LONG BY DNA POLYMERASE
NCI ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS
REACTOME S PHASEMCM3, PCNA, RPA1, RFC4, CDC6
REACTOME DNA REPAIR
VANTVEER BREAST CANCER METASTASIS DN
REACTOME SYNTHESIS OF DNA
SHEDDEN LUNG CANCER POOR SURVIVAL A6
PROVENZANI METASTASIS UP
KAUFFMANN DNA REPAIR GENES
REACTOME G2 M CHECKPOINTS
NCI BARD1PATHWAY
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
burkholderia pseudomalleipseudomonas aeruginosa fdr440staphylococcus aureushelicobacter pylori kx1 npgecGeneSet Name
-0.00038 -0.08117 -0.00290 -0.00349CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_DN
-0.00050 -0.00193 -0.01504 -0.00564NUYTTEN_EZH2_TARGETS_DN
-0.02029 -0.08869 -0.00010 -0.00086REACTOME_CELL_CYCLE_CHECKPOINTS
-0.00064 -0.00616 -0.01121 -0.00054REACTOME_CELL_CYCLE_MITOTIC
-0.00432 -0.03053 -0.11265 -0.04820REACTOME_LAGGING_STRAND_SYNTHESIS
-0.00015 -0.05184 -0.07330 -0.01536WU_APOPTOSIS_BY_CDKN1A_VIA_TP53
-0.00042 -0.02697 -0.08099 -0.00349MONTERO_THYROID_CANCER_POOR_SURVIVAL_UP
-0.00026 -0.04557 -0.03303 -0.01003BENPORATH_CYCLING_GENES
-0.00092 -0.12443 -0.15003 -0.10589NCI_REMOVAL_OF_THE_FLAP_INTERMEDIATE
-0.00197 -0.11126 -0.13738 -0.05940REACTOME_REPAIR_SYNTHESIS_OF_PATCH_27_30_BASES_LONG_BY_DNA_POLYMERASE
-0.00005 -0.00593 -0.19943 -0.02871ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN
-0.01482 -0.06683 -0.08474 -0.04323WAKASUGI_HAVE_ZNF143_BINDING_SITES
-0.00001 -0.17643 -0.00034 -0.00043KEGG_PARKINSONS_DISEASE
-0.00208 -0.00513 -0.09375 -0.07672REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.00003 -0.16847 -0.05490 -0.00233REACTOME_MITOTIC_PROMETAPHASE
-0.03491 -0.19532 -0.05150 -0.00206CORUM_F1F0-ATP_SYNTHASE_EC_3.6.3.14_MITOCHONDRIAL
-0.16652 -0.06516 -0.13690 -0.13404MODY_HIPPOCAMPUS_PRENATAL
-0.01224 -0.00065 -0.14825 -0.06173REACTOME_GLOBAL_GENOMIC_NER
-0.00243 -0.12007 -0.14370 -0.05413NCI_REPAIR_SYNTHESIS_FOR_GAP_FILLING_BY_DNA_POLYMERASE_IN_TC_NER
-0.00004 -0.00002 -0.04971 -0.03689REACTOME_DNA_STRAND_ELONGATION
-0.00002 -0.14959 -0.00302 -0.10442MUELLER_PLURINET
-0.12766 -0.07647 -0.16328 -0.00444KEGG_PROPANOATE_METABOLISM
-0.00288 -0.01706 -0.11217 -0.02530TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C
-0.01642 -0.14858 -0.11278 -0.03512RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_UP
-0.00082 -0.06304 -0.14338 -0.03806REACTOME_EXTENSION_OF_TELOMERES
-0.00209 -0.01975 -0.10346 -0.06469REACTOME_TRANSCRIPTION_COUPLED_NER
-0.00119 -0.17962 -0.00540 -0.02279POMEROY_MEDULLOBLASTOMA_PROGNOSIS_DN
-0.00019 -0.07874 -0.03692 -0.19689VERNELL_RETINOBLASTOMA_PATHWAY_UP
-0.00178 -0.00025 -0.08541 -0.17124REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS
-0.10597 -0.19907 -0.16670 -0.18356NCI_LEADING_STRAND_SYNTHESIS
-0.00002 -0.17181 -0.05445 -0.00299NCI_MITOTIC_PROMETAPHASE
-0.00365 -0.05993 -0.11783 -0.14811REACTOME_REMOVAL_OF_THE_FLAP_INTERMEDIATE
-0.00008 -0.14933 -0.01626 -0.02163RUIZ_TNC_TARGETS_DN
-0.00012 -0.07111 -0.00093 -0.03620ZHONG_RESPONSE_TO_AZACITIDINE_AND_TSA_DN
-0.04051 -0.18368 -0.00036 -0.00298REACTOME_G1_S_TRANSITION
-0.01432 -0.09845 -0.15728 -0.07647CORUM_DNA_SYNTHESOME_COMPLEX_13_SUBUNITS
-0.10843 -0.19900 -0.18360 -0.06192NCI_TELOMERE_C_STRAND__LAGGING_STRAND__SYNTHESIS
-0.00235 -0.11166 -0.13754 -0.05073NCI_REPAIR_SYNTHESIS_OF_PATCH__27_30_BASES_LONG__BY_DNA_POLYMERASE
-0.00190 -0.00005 -0.06912 -0.06478NCI_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS
-0.01960 -0.01808 -0.00011 -0.00088REACTOME_S_PHASE
-0.00513 -0.00009 -0.05043 -0.04418REACTOME_DNA_REPAIR
-0.00020 -0.01534 -0.13046 -0.08145VANTVEER_BREAST_CANCER_METASTASIS_DN
-0.04929 -0.02563 -0.00014 -0.00059REACTOME_SYNTHESIS_OF_DNA
-0.00001 -0.16572 -0.00265 -0.03282SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6
-0.00028 -0.16239 -0.14744 -0.05014PROVENZANI_METASTASIS_UP
-0.00140 -0.00283 -0.11135 -0.06811KAUFFMANN_DNA_REPAIR_GENES
-0.00044 -0.00021 -0.04680 -0.14113REACTOME_G2_M_CHECKPOINTS
-0.00861 -0.00646 -0.08493 -0.05432NCI_BARD1PATHWAY