BICLUSTER_ID : DNREG-250
PATHOGENS /4/ : pseudomonas aeruginosa,staphylococcus aureus,helicobacter pylori,ehrlichia chaffeensis
TARGETS /24/ : SQLE, NNT, PAPSS1, HSP90AB1, HPRT1, PPP2CA, HSP90AA1, FARS2, AURKA, RRM1, PSMD1, PPIC, SPTLC1, NDUFB5, SDHC, PSMB2, NDUFB3, SC4MOL, PSMB5, GMPS, ACAT2, IDH1, FDPS, CDK2
Gene SetLeading Edge Genes
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UPAP3S1, SET, CETN2, ILF2, HSP90AB1, AURKA, NDUFB5, TIPRL, SDHC, PSMB5, GMPS, PDIA6, ACP1, SSR2, TBCE, CNIH, HAX1, SSR1, COPB2, PAPSS1, HPRT1, OXA1L, FARS2, PPIC, GNPAT, MAPRE1, NDUFB3, PSMB2, NHP2L1, MSH6, IDH1, PEX19, KDELR2
WEST ADRENOCORTICAL TUMOR UPBUB1B, SQLE, SC5DL, NNT, POLE3, ELOVL6, RPN2, AURKA, PSMB7, SPTLC1, VPS41, PSMA3, MAPRE1, RFC5, CENPF, SCD, SC4MOL, TPX2, ACAT2, CDC23, PTTG1, TMEM106C, CDC25C, TMED9, ZMPSTE24, FDPS, ANXA4, KIF2C, EBP
REACTOME CELL CYCLE MITOTICBUB1B, PSMC5, CDC16, UBE2D1, CETN2, PSMA5, PSMA2, PPP2CA, HSP90AA1, CENPA, PSMB7, MAPRE1, RFC5, CENPF, PSMB2, PSMB5, CDC23, PTTG1, CDK2, PPP2R5C, KIF2C
REACTOME CELL CYCLE CHECKPOINTSPSMB2, BUB1B, PSMC5, PSMB5, CDC16, UBE2D1, CDC23, CDC25C, PSMA2, PSMD1, PSMB7, RFC5
REACTOME DNA REPLICATION PRE INITIATIONPSMB2, PSMC5, PSMD1, PSMB5, PSMB7, PSMA2
REN BOUND BY E2FRFC3, TTK, RRM1, CDK2, UMPS, PTTG1, CENPA
SOTIRIOU BREAST CANCER GRADE 1 VS 3 UPBUB1B, TTK, TPX2, PTTG1, STMN1, CENPA, AURKA, H2AFV, OIP5, CDK2, KIF2C, CENPF, TRIP13
MISSIAGLIA REGULATED BY METHYLATION DNPSIP1, BUB1B, MSH6, ACAT2, STMN1, CSE1L, RRM1, RFC5, CENPF, EBP
CROONQUIST NRAS SIGNALING DNCSE1L, BUB1B, AURKA, TPX2, OIP5, CDC25C, KIF2C, TRIP13, CENPA
NCI TRANSFORMATION OF LANOSTEROL TO CHOLESTEROL
NAKAMURA TUMOR ZONE PERIPHERAL VS CENTRAL UP
NCI CITRIC ACID CYCLE TCA CYCLE
RAMALHO STEMNESS UP
MORI IMMATURE B LYMPHOCYTE DN
KEGG OXIDATIVE PHOSPHORYLATION
WAKASUGI HAVE ZNF143 BINDING SITES
KEGG PARKINSONS DISEASE
MOLENAAR TARGETS OF CCND1 AND CDK4 DN
ZHAN MULTIPLE MYELOMA PR UP
REACTOME PEROXISOMAL LIPID METABOLISM
KEGG PROTEIN EXPORT
MOREAUX B LYMPHOCYTE MATURATION BY TACI DN
NCI APC C CDC20 MEDIATED DEGRADATION OF MITOTIC PROTEINS
LASTOWSKA NEUROBLASTOMA COPY NUMBER DN
KEGG PROPANOATE METABOLISM
NCI APC CDC20 MEDIATED DEGRADATION OF NEK2A
MANALO HYPOXIA DN
HOSHIDA LIVER CANCER SUBCLASS S2
BYSTRYKH HEMATOPOIESIS STEM CELL AND BRAIN QTL CIS
RICKMAN METASTASIS UP
CASORELLI ACUTE PROMYELOCYTIC LEUKEMIA DN
KOBAYASHI EGFR SIGNALING 24HR DN
REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING
FOURNIER ACINAR DEVELOPMENT LATE 2
REACTOME S PHASE
KEGG AMINOACYL TRNA BIOSYNTHESIS
RHODES CANCER META SIGNATURE
NCI FORMATION OF ATP BY CHEMIOSMOTIC COUPLING
REACTOME SYNTHESIS OF DNA
SHEDDEN LUNG CANCER POOR SURVIVAL A6
SCIBETTA KDM5B TARGETS DN
KAUFFMANN DNA REPAIR GENES
REACTOME TRANSFORMATION OF LANOSTEROL TO CHOLESTEROL
REACTOME CITRIC ACID CYCLE
AMUNDSON GAMMA RADIATION RESPONSE
FUJII YBX1 TARGETS DN
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
helicobacter pylori kx2 npgecstaphylococcus aureuspseudomonas aeruginosaehrlichia chaffeensis libertyGeneSet Name
-0.00489 -0.00628 -0.01279 -0.17557ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.00769 -0.00049 -0.01510 -0.00510WEST_ADRENOCORTICAL_TUMOR_UP
-0.00105 -0.01121 -0.00096 -0.14637REACTOME_CELL_CYCLE_MITOTIC
-0.00003 -0.00010 -0.00423 -0.05832REACTOME_CELL_CYCLE_CHECKPOINTS
-0.00061 -0.00420 -0.08852 -0.19897REACTOME_DNA_REPLICATION_PRE_INITIATION
-0.01436 -0.01841 -0.00642 -0.08737REN_BOUND_BY_E2F
-0.00042 -0.00001 -0.02364 -0.10983SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP
-0.00300 -0.01077 -0.00099 -0.08244MISSIAGLIA_REGULATED_BY_METHYLATION_DN
-0.00729 -0.00461 -0.00118 -0.17610CROONQUIST_NRAS_SIGNALING_DN
-0.00718 -0.04585 -0.12550 -0.00025NCI_TRANSFORMATION_OF_LANOSTEROL_TO_CHOLESTEROL
-0.00115 -0.04316 -0.15840 -0.18558NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_UP
-0.00868 -0.08269 -0.08092 -0.14602NCI_CITRIC_ACID_CYCLE__TCA_CYCLE_
-0.02836 -0.01055 -0.00090 -0.11352RAMALHO_STEMNESS_UP
-0.02413 -0.11163 -0.07989 -0.07682MORI_IMMATURE_B_LYMPHOCYTE_DN
-0.02319 -0.00014 -0.04935 -0.05744KEGG_OXIDATIVE_PHOSPHORYLATION
-0.13870 -0.08474 -0.19894 -0.09953WAKASUGI_HAVE_ZNF143_BINDING_SITES
-0.00236 -0.00034 -0.04469 -0.11182KEGG_PARKINSONS_DISEASE
-0.00059 -0.08972 -0.16096 -0.08292MOLENAAR_TARGETS_OF_CCND1_AND_CDK4_DN
-0.06073 -0.19936 -0.00283 -0.12250ZHAN_MULTIPLE_MYELOMA_PR_UP
-0.00494 -0.11279 -0.07680 -0.02794REACTOME_PEROXISOMAL_LIPID_METABOLISM
-0.01560 -0.12668 -0.05275 -0.07237KEGG_PROTEIN_EXPORT
-0.04233 -0.00074 -0.07235 -0.03538MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_DN
-0.00684 -0.11266 -0.02050 -0.13475NCI_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS
-0.05828 -0.08375 -0.11040 -0.13498LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN
-0.01525 -0.16328 -0.03223 -0.00135KEGG_PROPANOATE_METABOLISM
-0.01433 -0.10861 -0.01596 -0.09350NCI_APC_CDC20_MEDIATED_DEGRADATION_OF_NEK2A
-0.02679 -0.00136 -0.03027 -0.00680MANALO_HYPOXIA_DN
-0.18921 -0.05221 -0.04741 -0.07316HOSHIDA_LIVER_CANCER_SUBCLASS_S2
-0.13754 -0.04469 -0.13558 -0.10546BYSTRYKH_HEMATOPOIESIS_STEM_CELL_AND_BRAIN_QTL_CIS
-0.09744 -0.09474 -0.00225 -0.17550RICKMAN_METASTASIS_UP
-0.01247 -0.00290 -0.01995 -0.12436CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_DN
-0.04230 -0.00470 -0.08946 -0.16719KOBAYASHI_EGFR_SIGNALING_24HR_DN
-0.01571 -0.07131 -0.02813 -0.11053REACTOME_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING
-0.00795 -0.00173 -0.11866 -0.02119FOURNIER_ACINAR_DEVELOPMENT_LATE_2
-0.00017 -0.00011 -0.10989 -0.16739REACTOME_S_PHASE
-0.10289 -0.15999 -0.00922 -0.00338KEGG_AMINOACYL_TRNA_BIOSYNTHESIS
-0.04160 -0.01707 -0.02762 -0.08287RHODES_CANCER_META_SIGNATURE
-0.00171 -0.05454 -0.02984 -0.10869NCI_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING
-0.00016 -0.00014 -0.12476 -0.11584REACTOME_SYNTHESIS_OF_DNA
-0.02761 -0.00265 -0.01610 -0.14253SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6
-0.00149 -0.11866 -0.02302 -0.16023SCIBETTA_KDM5B_TARGETS_DN
-0.09101 -0.11135 -0.04560 -0.08733KAUFFMANN_DNA_REPAIR_GENES
-0.05807 -0.04367 -0.14211 -0.00039REACTOME_TRANSFORMATION_OF_LANOSTEROL_TO_CHOLESTEROL
-0.00139 -0.03412 -0.10992 -0.08753REACTOME_CITRIC_ACID_CYCLE
-0.00005 -0.08951 -0.00099 -0.18224AMUNDSON_GAMMA_RADIATION_RESPONSE
-0.01337 -0.12728 -0.02050 -0.05731FUJII_YBX1_TARGETS_DN