BICLUSTER_ID : DNREG-26
PATHOGENS /4/ : staphylococcus aureus,aggregatibacter actinomycetemcomitans,aeromonas caviae,porphyromonas gingivalis
TARGETS /47/ : SQLE, MMP12, HMGCR, PPP2CB, NDUFB8, NDUFB5, MIF, PCTP, TYMS, UQCRC1, NDUFB7, NDUFA6, PSMB5, NDUFS6, APEX1, GAMT, TRAPPC3, SLC25A4, PDHA1, NDUFAB1, IDE, SUCLA2, NDUFS3, NDUFC1, NDUFA13, NDUFV2, EPHA2, SDHB, LCMT2, PAPSS1, HPRT1, PPP2CA, AMD1, ASRGL1, NDUFA2, CYB5A, AASS, PSMB2, PSMD2, GSTZ1, NDUFS4, HADHA, SUCLG1, CALM1, NDUFB6, HINT1, QDPR
Gene SetLeading Edge Genes
DIAZ CHRONIC MEYLOGENOUS LEUKEMIA UPPRDX6, MAGOH, POLE3, COPS5, HMGCR, PPP2CB, ALG5, CCT3, YKT6, PTPLA, SLBP, ITPA, PSMA3, TXNL1, ICT1, UBE2V2, ATP5O, PSMB5, TRAPPC3, ACTR1A, GTF2B, ALKBH1, PDHA1, CRIP1, DHCR24, IDE, COPS3, SUCLA2, BNIP3, LSM8, PDCD6, NDUFV2, UBAP2, PAPSS1, TCEB1, CCT6A, MED6, AMD1, NHP2L1, NDUFS4, PSMD3, KHDRBS1, HADHA, SFRS1, HEBP2, RANBP1, NDUFB6, DCTN6, XRCC5, PRDX3, CFDP1, POLR2C, EIF5, SQLE, SNX3, NMD3, DBF4, POLR2K, NDUFB5, MIF, UCHL5, PCTP, EMP3, UQCRC1, ACP1, TCP1, SSBP1, ST13, RNF14, NDUFAB1, BCKDHB, AK2, RAB4A, DPP3, DRG2, GTPBP4, LSM5, PSMC6, SNX5, DRAP1, HPRT1, COPS2, LASS2, TOMM22, PSMC3, MTCH2, RER1, RAB11A, PABPN1, UBE2N, SNRPB2, PSMB2, PSMD2, CPOX, PSMD12, SUCLG1, DRG1, PSMD8, CALM1, GTF2H1, SRP19, MRPS31, QDPR
KEGG PARKINSONS DISEASENDUFA6, UQCRC1, ATP5O, NDUFB7, NDUFS6, SDHB, NDUFS4, NDUFB8, UQCRH, UQCRQ, NDUFB6, NDUFAB1, COX7C, NDUFS3, NDUFA2, NDUFC1
KEGG HUNTINGTONS DISEASENDUFB8, POLR2K, NDUFA2, POLR2G, NDUFB7, ATP5O, UQCRC1, NDUFA6, NDUFS4, CLTB, NDUFB6, POLR2H, NDUFAB1, DCTN2, NDUFS3, POLR2C, NDUFC1
REACTOME CELL CYCLE MITOTICPSMC5, PCNA, RRM2, PPP2CB, RFC2, ZWINT, PLK1, DBF4, CCNB1, PSMB6, PSMC3, PPP2CA, CCDC99, ITGB3BP, PSMB7, RPA3, PSMA3, CCNA2, MNAT1, PSMB2, PSMD2, KIF18A, PSMB5, PSMD6, PSMD12, PSMD8, DCTN2, PSMC6, BIRC5
PAL PRMT5 TARGETS UPNDUFA13, CD99, TMPO, NDUFB8, PSMC3, SLBP, LOXL1, TMEM93, EMP3, PSMB5, APEX1, EIF1AY, GSTZ1, LSM3, PSMD6, ST7, CKS2, COPS3, CFDP1, MRPL48
REACTOME MITOTIC M M G1 PHASESPSMC5, PPP2CB, MLF1IP, ZWINT, PLK1, PSMB6, PSMC3, PPP2CA, CCDC99, ITGB3BP, PSMB7, PSMA3, PSMB2, PSMD2, PSMB5, KIF18A, PSMD6, PSMD12, PSMD8, PSMC6, BIRC5
TARTE PLASMA CELL VS PLASMABLAST DNPSMC5, NDUFV2, PCNA, UCHL3, RRM2, SDHB, TMPO, TCEB1, CCNB1, PAK2, HSPE1, PSMA3, PHB, CCNA2, ICT1, SNRPB2, TYMS, NDUFB7, ATP5O, PSMB2, CPOX, NASP, CCT5, TCP1, DHCR24, CKS2, IDH2, EIF5
KINSEY TARGETS OF EWSR1 FLII FUSION UPSQLE, PCNA, MAGOH, SNX3, RRM2, POLE3, TMPO, PLK1, ATG5, DBF4, CCNB1, PAK2, CCDC99, SLBP, POLR2K, UCHL5, TMEM93, CDCA3, ACP1, CYB5B, TCP1, MAP3K7, TIPIN, COPS3, AK2, RNASEH2A, SUCLA2, TPRKB, RFC2, TCEB1, TOMM22, MED6, PSMC3, ITGB3BP, GGA2, ASRGL1, COX4NB, THAP1, MRPL15, TMEM70, HMMR, CYB5A, E2F6, KIF18A, GTF2A1, SFRS2, GORASP2, GTF2A2, RANBP1, CALM1, GPD2, PRDX3, UBE3A, MRPL48, BIRC5
GARY CD5 TARGETS DNPSMC5, RRM2, PAK1IP1, CCNB1, RAN, HSPA14, SAP18, NDUFB7, PSMB5, LANCL2, PQBP1, CYB5B, ASNSD1, MAP3K7, TIPIN, MGAT2, BXDC5, PMPCA, GTPBP4, PSMC6, RFC2, LCMT2, PSMC3, MRPL35, MRPS11, PFDN1, MRPL15, UFM1, OIP5, PDCD5, DNAJA1, SFRS2, DRG1, GTF2H1, HINT1, EIF5, BIRC5
WEI MYCN TARGETS WITH E BOXTIMM10, ARPC5L, PKNOX1, UCHL3, RRM2, POLE3, RPP30, CCDC99, CSRP2, PSMA3, ICT1, HSPA14, PMM2, TIPIN, COPS3, ZBTB38, TUBB6, PDCD6, MRPL22, TPRKB, GOLT1B, TCEB1, MRPL35, AMD1, GGA2, MTCH2, MRPL15, HMMR, TMEM70, PABPN1, PTS, MRPL18, VRK1, PSMD2, PSMD12, SUCLG1, CALM1, POP7, GPD2, POLR3K, SRP19, IDI1, EIF5, MRPL39, BIRC5
REACTOME HIV INFECTIONPSMC5, TCEB2, TCEB1, PSMB6, PSMC3, PAK2, RAN, POLR2K, PSMB7, PSMA3, POLR2G, MNAT1, PSMB2, RBX1, ERCC3, PSMD2, PSMB5, PSMD6, SLC25A4, RAE1, GTF2B, GTF2A1, PSMD12, PSMD8, RANBP1, POLR2H, NUP93, GTF2H1, BANF1, POLR2C, PSMC6
SHEDDEN LUNG CANCER POOR SURVIVAL A6PCNA, MMP12, RRM2, ZWINT, DBF4, ATG5, CCNB1, RAN, YKT6, PBK, SLBP, MIF, CDCA3, RECQL4, ACP1, TCP1, CKS2, MRPL13, RASAL2, RFC2, TPRKB, MTCH2, HMMR, CCNA2, PSMB2, DNAJA1, KIF18A, PSMD12, HEXIM1, CCT5, GPD2, BIRC5
BLUM RESPONSE TO SALIRASIB DNPCNA, RRM2, RFC2, TMPO, PLK1, PRSS23, ITGB3BP, PBK, HMMR, CCNA2, NDUFA2, HSPA14, CYB5A, RBX1, GAMT, VRK1, RECQL4, RANBP1, DHCR24, CKS2, PRDX3, CHST12, RNASEH2A, RAB4A, CRIP2, LSM5
ZHANG BREAST CANCER PROGENITORS UPRRM2, NVL, TMPO, DBF4, TULP3, MRPS33, MED6, PBK, RPA3, CCNA2, RNF7, DNAJA1, NDUFS4, SSBP1, SUCLA2, LSM5, PUS7L, NDUFC1
CORUM PA700-20S-PA28 COMPLEXPSMB2, PSMC5, PSMD2, PSMB5, PSMD6, PSMD3, PSMD12, PSMB6, PSMD8, PSMC3, PSMB7, PSMB3, PSMA3, PSMC6
BASAKI YBX1 TARGETS UPARPC5L, EPHA2, TPRKB, RFC2, PLK1, PRSS23, CCNB1, PSMB6, CCDC99, PBK, CCNA2, CDCA3, PSMD2, TNFRSF12A, NUP93, HINT1, BIRC5, SNX5
MOREAUX B LYMPHOCYTE MATURATION BY TACI DNNDUFA13, TTRAP, NASP, CCT5, MRPS12, PSMD8, SSBP1, RAN, LSM5, TYMS
BIOCARTA PROTEASOME PATHWAYPSMB2, PSMB5, PSMB7, PSMA3, PSMB3, PSMB6
LINDGREN BLADDER CANCER CLUSTER 3 UPPCNA, RRM2, TMPO, PLK1, PAK1IP1, PEPD, DBF4, ATG5, MRPS12, CCNB1, RPA3, TYMS, VRK1, INSIG1, NASP, SUCLG1, CKS2, RNASEH2A, AK2, IDH2, MRPL48, TFG, BIRC5
DANG MYC TARGETS UPAPEX1, SLC25A3, PCNA, RFC2, H2AFZ, CCNB1, CCT5, CKS2, HSPE1, PHB, UXT, TYMS
REACTOME G1 S TRANSITIONPSMC5, PSMD2, PSMB5, PCNA, RRM2, PSMD6, PSMB6, CCNB1, DBF4, PSMD8, PSMC3, PSMB7, RPA3, CCNA2, PSMC6
CORUM 26S PROTEASOMEPSMB2, PSMC5, PSMB5, PSMB6, PSMC3, PSMB7, PSMA3, PSMB3, PSMC6
BORCZUK MALIGNANT MESOTHELIOMA UPPDCD6, PCNA, SLC25A3, SCCPDH, COPS5, H2AFZ, TCEB1, CCNB1, PSMB6, PAK2, CCT3, RAN, YKT6, PSMB7, BRP44, PSMD2, DNAJA1, SFRS1, RAB32, CCT5, SSBP1, PSMD8, CKS2, XRCC5, SEC61G, RAB4A
MUELLER PLURINETPCNA, TTRAP, RFC2, TMPO, CCNB1, ITGB3BP, HSPE1, RPA3, PSMA3, HMMR, CCNA2, HSPA14, MNAT1, APEX1, RECQL4, LSM3, SFRS2, DHCR24, POP7, CKS2, COPS3, U2AF1, LSM5, BIRC5
CROONQUIST IL6 DEPRIVATION DNPCNA, NASP, PLK1, CCNB1, CKS2, HMMR, OIP5, CCNA2, AASS
MOREAUX MULTIPLE MYELOMA BY TACI DNPDCD6, TTRAP, PAK1IP1, NASP, ANKRD49, MRPS12, DBF4, CCT5, PSMD8, SSBP1, RAN, COMMD4, SHFM1, LSM5, TYMS
GRAHAM CML DIVIDING VS NORMAL QUIESCENT UP
NCI PAUSING AND RECOVERY OF ELONGATION
PUJANA BRCA1 PCC NETWORK
LI WILMS TUMOR VS FETAL KIDNEY 1 DN
REACTOME RNA POL II CTD PHOSPHORYLATION AND INTERACTION WITH CE
NCI RNA POLYMERASE II TRANSCRIPTION PRE INITIATION
REACTOME NUCLEOTIDE EXCISION REPAIR
SANA RESPONSE TO IFNG DN
CORUM DDB2 COMPLEX
NCI HOST INTERACTIONS OF HIV FACTORS
NCI VIRAL MESSENGER RNA SYNTHESISHNRPM, POLR2F, CD2BP2, SFRS2, POLR2H, POLR2K, U2AF1, POLR2C, PCBP1, RBMX, POLR2J, POLR2G, HNRPF
NUYTTEN EZH2 TARGETS DN
NCI ORC1 REMOVAL FROM CHROMATIN
ZHAN VARIABLE EARLY DIFFERENTIATION GENES DN
KEGG SPLICEOSOMEMAGOH, RBM22, BUD31, PRPF4, PCBP1, SNRPB2, LSM3, PQBP1, SFRS2, SFRS1, LSM6, U2AF1, RBM8A, SNRPD2, RBMX, LSM5
NCI SCF SKP2 MEDIATED DEGRADATION OF P27 P21
REACTOME SCF SKP2 MEDIATED DEGRADATION OF P27 P21
NCI FORMATION OF THE EARLY ELONGATION COMPLEX
REACTOME SCF BETA TRCP MEDIATED DEGRADATION OF EMI1
NCI RNA POLYMERASE II TRANSCRIPTION ELONGATIONERCC3, TCEB1, TCEB2, POLR2H, GTF2H1, POLR2K, POLR2C, POLR2G, MNAT1
CORUM PA700 COMPLEX
LE EGR2 TARGETS UP
CORUM PA28GAMMA-20S PROTEASOME
REACTOME HOST INTERACTIONS OF HIV FACTORS
REACTOME CDT1 ASSOCIATION WITH THE CDC6 ORC ORIGIN COMPLEX
REACTOME SYNTHESIS OF DNA
REACTOME TAT MEDIATED HIV1 ELONGATION ARREST AND RECOVERY
NCI APC C CDH1 MEDIATED DEGRADATION OF CDC20 AND OTHER APC C CDH1 TARGETED PROTEINS IN LATE MITOSIS EARLY G1
REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNAMAGOH, POLR2L, SLBP, POLR2B, POLR2K, PRPF4, PCBP1, PABPN1, POLR2J, POLR2G, NUDT21, SNRPB2, POLR2F, CD2BP2, RAE1, SFRS2, SFRS1, NUP37, POLR2H, NUP93, RBM8A, SNRPD2, U2AF1, POLR2C, RBMX
NCI VPU MEDIATED DEGRADATION OF CD4
NCI AUTODEGRADATION OF CDH1 BY CDH1 APC C
REACTOME LATE PHASE OF HIV LIFE CYCLEERCC3, GTF2A1, GTF2B, RAE1, TCEB1, TCEB2, RANBP1, NUP93, RAN, POLR2H, GTF2H1, POLR2K, POLR2C, MNAT1, POLR2G
NCI ELONGATION ARREST AND RECOVERY
NCI CDK MEDIATED PHOSPHORYLATION AND REMOVAL OF CDC6
MORI IMMATURE B LYMPHOCYTE DN
REACTOME TELOMERE MAINTENANCE
CORUM LSM1-7 COMPLEX
CAFFAREL RESPONSE TO THC 24HR 5 UP
REACTOME MITOTIC PROMETAPHASE
REACTOME HIV1 TRANSCRIPTION INITIATION
NCI CDT1 ASSOCIATION WITH THE CDC6 ORC ORIGIN COMPLEX
NCI RNA POLYMERASE II TRANSCRIPTION INITIATION
NCI RNA POLYMERASE II HIV 1 PROMOTER ESCAPE
NCI PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA
REACTOME REGULATION OF ORNITHINE DECARBOXYLASE
NCI MRNA SPLICING MAJOR PATHWAYMAGOH, POLR2L, POLR2K, PRPF4, PABPN1, POLR2J, POLR2G, NUDT21, SNRPB2, HNRPM, POLR2F, CD2BP2, SFRS2, SFRS1, POLR2H, RBM8A, U2AF1, POLR2C, HNRPF
FOURNIER ACINAR DEVELOPMENT LATE 2
MOHANKUMAR TLX1 TARGETS UP
MORI LARGE PRE BII LYMPHOCYTE UP
REACTOME HIV1 TRANSCRIPTION ELONGATIONERCC3, TCEB1, TCEB2, POLR2H, GTF2H1, POLR2K, POLR2C, POLR2G, MNAT1
CORUM SPLICEOSOME
NCI SCF BETA TRCP MEDIATED DEGRADATION OF EMI1
NCI PAUSING AND RECOVERY OF HIV 1 ELONGATION
NCI REGULATION OF ACTIVATED PAK 2P34 BY PROTEASOME MEDIATED DEGRADATION1
NCI TAT MEDIATED HIV 1 ELONGATION ARREST AND RECOVERY
NCI VIF MEDIATED DEGRADATION OF APOBEC3G
VECCHI GASTRIC CANCER EARLY UP
NCI DEGRADATION OF BETA CATENIN BY THE DESTRUCTION COMPLEX
CORUM LSM2-8 COMPLEX
REACTOME FORMATION AND MATURATION OF MRNA TRANSCRIPTERCC3, MAGOH, CD2BP2, GTF2A1, GTF2B, TCEB2, SFRS2, TCEB1, GTF2A2, POLR2H, GTF2H1, POLR2K, U2AF1, POLR2C, POLR2G, MNAT1
MISSIAGLIA REGULATED BY METHYLATION DN
NCI MRNA SPLICING MINOR PATHWAYPOLR2F, SFRS2, SFRS1, POLR2L, POLR2H, POLR2K, POLR2C, POLR2J, POLR2G
DODD NASOPHARYNGEAL CARCINOMA DN
BENPORATH PROLIFERATIONPCNA, RRM2, DBF4, RANBP1, CKS2, COX4NB, PSMA3, IDH2, GTPBP4, SHFM1, PDCD5, PTS, BIRC5
REACTOME TRANSCRIPTION OF THE HIV GENOMEERCC3, GTF2A1, GTF2B, TCEB1, TCEB2, POLR2H, GTF2H1, POLR2K, POLR2C, POLR2G, MNAT1
NCI HIV 1 TRANSCRIPTION INITIATION
NCI TAT MEDIATED ELONGATION OF THE HIV 1 TRANSCRIPTERCC3, TCEB1, TCEB2, POLR2H, GTF2H1, POLR2K, POLR2C, POLR2G, MNAT1
NCI RNA POL II CTD PHOSPHORYLATION AND INTERACTION WITH CE
NCI RNA POL II CTD PHOSPHORYLATION AND INTERACTION WITH CE1
WHITEFORD PEDIATRIC CANCER MARKERSCKS2, PCNA, RNASEH2A, RECQL4, RRM2, TMPO, CCNA2, CCNB1, BIRC5
RHODES UNDIFFERENTIATED CANCER
REACTOME CELL CYCLE CHECKPOINTS
ALONSO METASTASIS UP
NCI REMOVAL OF LICENSING FACTORS FROM ORIGINS
REACTOME RNA POLYMERASE II TRANSCRIPTIONERCC3, MAGOH, POLR2F, GTF2B, SFRS2, TCEB1, TCEB2, GTF2A2, GTF2H1, POLR2K, RBM8A, U2AF1, POLR2C, POLR2J, MNAT1
ODONNELL TARGETS OF MYC AND TFRC DN
ZHAN MULTIPLE MYELOMA PR UP
REACTOME ABORTIVE ELONGATION OF HIV1 TRANSCRIPT IN THE ABSENCE OF TAT
REACTOME MRNA SPLICINGMAGOH, POLR2L, POLR2K, PRPF4, PABPN1, POLR2J, POLR2G, NUDT21, SNRPB2, CD2BP2, POLR2F, SFRS2, SFRS1, POLR2H, U2AF1, RBM8A, POLR2C
REACTOME RNA POLYMERASE I III AND MITOCHONDRIAL TRANSCRIPTION
NCI HIV 1 ELONGATION ARREST AND RECOVERY
REACTOME GLOBAL GENOMIC NER
NCI APC C CDC20 MEDIATED DEGRADATION OF SECURIN
NCI FORMATION OF THE HIV 1 EARLY ELONGATION COMPLEX
MARKEY RB1 ACUTE LOF DN
REACTOME ELONGATION AND PROCESSING OF CAPPED TRANSCRIPTSERCC3, MAGOH, CD2BP2, TCEB2, SFRS1, POLR2L, TCEB1, POLR2H, GTF2H1, POLR2K, POLR2C, PABPN1, POLR2G, MNAT1, SNRPB2
REACTOME TRANSCRIPTION COUPLED NER
NCI MRNA CAPPING
NCI PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC
NCI RNA POLYMERASE II TRANSCRIPTION
NCI MITOTIC PROMETAPHASE
CROONQUIST NRAS SIGNALING DN
REACTOME VIRAL MESSENGER RNA SYNTHESIS
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UP
REACTOME METABOLISM OF RNA
NCI HIV 1 TRANSCRIPTION ELONGATION
REACTOME DNA REPLICATION PRE INITIATION
REACTOME FORMATION OF THE EARLY ELONGATION COMPLEX
NCI PAUSING AND RECOVERY OF TAT MEDIATED HIV 1 ELONGATION
NCI FORMATION OF HIV 1 ELONGATION COMPLEX CONTAINING HIV 1 TATERCC3, TCEB1, TCEB2, POLR2H, GTF2H1, POLR2K, POLR2C, POLR2G, MNAT1
REACTOME REGULATION OF APC ACTIVATORS BETWEEN G1 S AND EARLY ANAPHASE
FURUKAWA DUSP6 TARGETS PCI35 DN
REACTOME CDC20 PHOSPHO APC MEDIATED DEGRADATION OF CYCLIN A
REACTOME RNA POLYMERASE I PROMOTER CLEARANCE
REACTOME VIF MEDIATED DEGRADATION OF APOBEC3G
DING LUNG CANCER EXPRESSION BY COPY NUMBER
NCI FORMATION OF RNA POL II ELONGATION COMPLEX ERCC3, TCEB1, TCEB2, POLR2H, GTF2H1, POLR2K, POLR2C, POLR2G, MNAT1
WINNEPENNINCKX MELANOMA METASTASIS UPDNAJA1, PCNA, RRM2, CCNB1, CCT5, RANBP1, CKS2, ENY2, RPA3, BIRC5
NCI ELONGATION OF INTRON CONTAINING TRANSCRIPTS AND CO TRANSCRIPTIONAL MRNA SPLICING
LEE LIVER CANCER SURVIVAL DN
NCI RNA POLYMERASE II PROMOTER ESCAPE
LUI THYROID CANCER CLUSTER 3
NCI ABORTIVE ELONGATION OF HIV 1 TRANSCRIPT IN THE ABSENCE OF TAT
NCI UBIQUITIN DEPENDENT DEGRADATION OF CYCLIN D1
NCI CDC20 PHOSPHO APC C MEDIATED DEGRADATION OF CYCLIN A
SPIELMAN LYMPHOBLAST EUROPEAN VS ASIAN DN
CORUM 20S PROTEASOME
REACTOME MRNA SPLICING MINOR PATHWAYPOLR2H, POLR2K, POLR2C, POLR2G
NCI REGULATION OF ORNITHINE DECARBOXYLASE ODC
WEST ADRENOCORTICAL TUMOR UP
YU MYC TARGETS UP
REACTOME ORC1 REMOVAL FROM CHROMATIN
REACTOME AUTODEGRADATION OF CDH1 BY CDH1 APC
CORUM RNA POLYMERASE II HOLOENZYME COMPLEX
LASTOWSKA NEUROBLASTOMA COPY NUMBER UP
REACTOME S PHASE
BOYAULT LIVER CANCER SUBCLASS G3 UPLRRC59, COPS5, TPRKB, GOLT1B, CYB5B, PAK1IP1, TCEB1, CCT5, TIPIN, ZWILCH, POLR2K, SEC61G, HMMR, CCNA2, PSMC6, UBE2V2
NCI FORMATION AND MATURATION OF MRNA TRANSCRIPT
RHODES CANCER META SIGNATURE
NCI RNA POLYMERASE II TRANSCRIPTION INITIATION AND PROMOTER CLEARANCE
REACTOME TRANSCRIPTIONERCC3, MAGOH, POLR2F, TCEB2, SFRS2, TCEB1, GTF2A2, GTF2H1, POLR2K, RBM8A, U2AF1, POLR2C, POLR2J, MNAT1
NCI HIV 1 TRANSCRIPTION PRE INITIATION
REACTOME M G1 TRANSITION
NCI SWITCHING OF ORIGINS TO A POST REPLICATIVE STATE
REACTOME HIV LIFE CYCLEERCC3, GTF2A1, GTF2B, RAE1, TCEB1, TCEB2, RANBP1, NUP93, RAN, POLR2H, GTF2H1, POLR2K, BANF1, POLR2C, MNAT1, POLR2G
NCI REGULATION OF ACTIVATED PAK 2P34 BY PROTEASOME MEDIATED DEGRADATION
NCI UBIQUITIN MEDIATED DEGRADATION OF PHOSPHORYLATED CDC25A
NCI TRANSCRIPTION OF THE HIV GENOME
REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
staphylococcus aureusporphyromonas gingivalisaeromonas caviaaggregatibacter actinomycetemcomitansGeneSet Name
-0.00026 -0.01515 -0.00199 -0.03522DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP
-0.00034 -0.00196 -0.00031 -0.01663KEGG_PARKINSONS_DISEASE
-0.00320 -0.01132 -0.00074 -0.00352KEGG_HUNTINGTONS_DISEASE
-0.01121 -0.00002 -0.01738 -0.01005REACTOME_CELL_CYCLE_MITOTIC
-0.00128 -0.00394 -0.00510 -0.00051PAL_PRMT5_TARGETS_UP
-0.00086 -0.00012 -0.02749 -0.00853REACTOME_MITOTIC_M_M_G1_PHASES
-0.00101 -0.00195 -0.00013 -0.00685TARTE_PLASMA_CELL_VS_PLASMABLAST_DN
-0.00170 -0.01136 -0.00039 -0.00655KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP
-0.00522 -0.00029 -0.00012 -0.00636GARY_CD5_TARGETS_DN
-0.04063 -0.00804 -0.00002 -0.02179WEI_MYCN_TARGETS_WITH_E_BOX
-0.00072 -0.00002 -0.01059 -0.00538REACTOME_HIV_INFECTION
-0.00265 -0.00219 -0.00092 -0.00025SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6
-0.00293 -0.01336 -0.01909 -0.00008BLUM_RESPONSE_TO_SALIRASIB_DN
-0.01024 -0.02283 -0.02211 -0.01073ZHANG_BREAST_CANCER_PROGENITORS_UP
-0.00061 -0.00038 -0.00461 -0.00151CORUM_PA700-20S-PA28_COMPLEX
-0.00025 -0.01567 -0.00186 -0.00039BASAKI_YBX1_TARGETS_UP
-0.00074 -0.00539 -0.02451 -0.03024MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_DN
-0.00770 -0.03291 -0.01760 -0.02323BIOCARTA_PROTEASOME_PATHWAY
-0.00561 -0.02524 -0.00804 -0.00227LINDGREN_BLADDER_CANCER_CLUSTER_3_UP
-0.00030 -0.00933 -0.00049 -0.02906DANG_MYC_TARGETS_UP
-0.00036 -0.00005 -0.03437 -0.01052REACTOME_G1_S_TRANSITION
-0.00672 -0.00246 -0.00087 -0.01654CORUM_26S_PROTEASOME
-0.00005 -0.00191 -0.00026 -0.00036BORCZUK_MALIGNANT_MESOTHELIOMA_UP
-0.00302 -0.00024 -0.01895 -0.04867MUELLER_PLURINET
-0.01378 -0.00054 -0.02538 -0.00045CROONQUIST_IL6_DEPRIVATION_DN
-0.00030 -0.00320 -0.00005 -0.01891MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.00589 -0.19892 -0.00002 -0.00007GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP
-0.07001 -0.02560 -0.10650 -0.03781NCI_PAUSING_AND_RECOVERY_OF_ELONGATION
-0.00645 -0.02359 -0.02210 -0.12299PUJANA_BRCA1_PCC_NETWORK
-0.09147 -0.18322 -0.04133 -0.14017LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN
-0.06844 -0.01147 -0.00414 -0.01969REACTOME_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE
-0.09957 -0.00286 -0.00307 -0.00217NCI_RNA_POLYMERASE_II_TRANSCRIPTION_PRE_INITIATION
-0.09375 -0.00069 -0.02788 -0.00561REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.00065 -0.05467 -0.05430 -0.03439SANA_RESPONSE_TO_IFNG_DN
-0.19806 -0.08330 -0.05984 -0.04847CORUM_DDB2_COMPLEX
-0.00014 -0.00011 -0.15534 -0.00279NCI_HOST_INTERACTIONS_OF_HIV_FACTORS
-0.00353 -0.00004 -0.00344 -0.00032NCI_VIRAL_MESSENGER_RNA_SYNTHESIS
-0.01504 -0.00360 -0.09241 -0.12376NUYTTEN_EZH2_TARGETS_DN
-0.00011 -0.00011 -0.16795 -0.10123NCI_ORC1_REMOVAL_FROM_CHROMATIN
-0.04161 -0.08387 -0.02520 -0.00076ZHAN_VARIABLE_EARLY_DIFFERENTIATION_GENES_DN
-0.00049 -0.00004 -0.01804 -0.01022KEGG_SPLICEOSOME
-0.00010 -0.00013 -0.16007 -0.00147NCI_SCF_SKP2__MEDIATED_DEGRADATION_OF_P27_P21
-0.00025 -0.00002 -0.14701 -0.00099REACTOME_SCF_SKP2_MEDIATED_DEGRADATION_OF_P27_P21
-0.04622 -0.00536 -0.00204 -0.00082NCI_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.00074 -0.00003 -0.17884 -0.00148REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1
-0.03586 -0.00759 -0.00851 -0.01010NCI_RNA_POLYMERASE_II_TRANSCRIPTION_ELONGATION
-0.01746 -0.02921 -0.00033 -0.07056CORUM_PA700_COMPLEX
-0.18995 -0.04284 -0.05330 -0.00010LE_EGR2_TARGETS_UP
-0.00722 -0.01817 -0.09441 -0.01021CORUM_PA28GAMMA-20S_PROTEASOME
-0.00549 -0.00012 -0.06036 -0.18688REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS
-0.00019 -0.00011 -0.16138 -0.01022REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX
-0.00014 -0.00002 -0.13465 -0.02170REACTOME_SYNTHESIS_OF_DNA
-0.08666 -0.01834 -0.05989 -0.02602REACTOME_TAT_MEDIATED_HIV1_ELONGATION_ARREST_AND_RECOVERY
-0.00010 -0.00041 -0.13447 -0.00827NCI_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1
-0.00320 -0.00007 -0.00110 -0.00106REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
-0.00026 -0.00019 -0.13870 -0.00454NCI_VPU_MEDIATED_DEGRADATION_OF_CD4
-0.00009 -0.00049 -0.12840 -0.00670NCI_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C
-0.02347 -0.00065 -0.00060 -0.04575REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE
-0.06324 -0.02720 -0.10563 -0.03521NCI_ELONGATION_ARREST_AND_RECOVERY
-0.00011 -0.00015 -0.19025 -0.00338NCI_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6
-0.11163 -0.02597 -0.01113 -0.00118MORI_IMMATURE_B_LYMPHOCYTE_DN
-0.06646 -0.04272 -0.17908 -0.14016REACTOME_TELOMERE_MAINTENANCE
-0.14875 -0.05722 -0.05302 -0.07192CORUM_LSM1-7_COMPLEX
-0.02005 -0.05885 -0.01437 -0.03560CAFFAREL_RESPONSE_TO_THC_24HR_5_UP
-0.05490 -0.02038 -0.01572 -0.06546REACTOME_MITOTIC_PROMETAPHASE
-0.09967 -0.00322 -0.00341 -0.00226REACTOME_HIV1_TRANSCRIPTION_INITIATION
-0.00013 -0.00011 -0.14799 -0.01221NCI_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX
-0.09959 -0.00283 -0.00362 -0.00217NCI_RNA_POLYMERASE_II_TRANSCRIPTION_INITIATION
-0.09475 -0.00310 -0.00350 -0.00215NCI_RNA_POLYMERASE_II_HIV_1_PROMOTER_ESCAPE
-0.08110 -0.00458 -0.01716 -0.01799NCI_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
-0.00016 -0.00007 -0.09985 -0.00064REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE
-0.00322 -0.00002 -0.00363 -0.00014NCI_MRNA_SPLICING___MAJOR_PATHWAY
-0.00173 -0.00037 -0.00027 -0.07933FOURNIER_ACINAR_DEVELOPMENT_LATE_2
-0.04446 -0.19488 -0.01503 -0.18750MOHANKUMAR_TLX1_TARGETS_UP
-0.06142 -0.03260 -0.08123 -0.04933MORI_LARGE_PRE_BII_LYMPHOCYTE_UP
-0.03761 -0.00449 -0.00365 -0.00851REACTOME_HIV1_TRANSCRIPTION_ELONGATION
-0.00027 -0.00003 -0.12815 -0.03713CORUM_SPLICEOSOME
-0.00016 -0.00012 -0.12440 -0.00218NCI_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1
-0.07451 -0.02552 -0.10650 -0.03849NCI_PAUSING_AND_RECOVERY_OF_HIV_1_ELONGATION
-0.00018 -0.00009 -0.13777 -0.00217NCI_REGULATION_OF_ACTIVATED_PAK_2P34_BY_PROTEASOME_MEDIATED_DEGRADATION1
-0.06969 -0.01998 -0.05392 -0.01179NCI_TAT_MEDIATED_HIV_1_ELONGATION_ARREST_AND_RECOVERY_
-0.00017 -0.00007 -0.06065 -0.00112NCI_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G
-0.16261 -0.00437 -0.12829 -0.00850VECCHI_GASTRIC_CANCER_EARLY_UP
-0.00053 -0.00010 -0.13493 -0.00560NCI_DEGRADATION_OF_BETA_CATENIN_BY_THE_DESTRUCTION_COMPLEX
-0.16000 -0.06582 -0.14551 -0.03536CORUM_LSM2-8_COMPLEX
-0.00221 -0.00004 -0.00227 -0.00084REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT
-0.01077 -0.00095 -0.05423 -0.07337MISSIAGLIA_REGULATED_BY_METHYLATION_DN
-0.01027 -0.00064 -0.00883 -0.00046NCI_MRNA_SPLICING___MINOR_PATHWAY
-0.00626 -0.02277 -0.06032 -0.07577DODD_NASOPHARYNGEAL_CARCINOMA_DN
-0.00003 -0.02164 -0.01238 -0.00048BENPORATH_PROLIFERATION
-0.03739 -0.00132 -0.00569 -0.00567REACTOME_TRANSCRIPTION_OF_THE_HIV_GENOME
-0.08989 -0.00288 -0.00339 -0.00228NCI_HIV_1_TRANSCRIPTION_INITIATION
-0.03282 -0.01124 -0.00551 -0.00570NCI_TAT_MEDIATED_ELONGATION_OF_THE_HIV_1_TRANSCRIPT
-0.08065 -0.02074 -0.00409 -0.00663NCI_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE
-0.08079 -0.02045 -0.00351 -0.00666NCI_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE1
-0.00027 -0.02713 -0.01546 -0.00052WHITEFORD_PEDIATRIC_CANCER_MARKERS
-0.16035 -0.00835 -0.08510 -0.00010RHODES_UNDIFFERENTIATED_CANCER
-0.00010 -0.00004 -0.12741 -0.02580REACTOME_CELL_CYCLE_CHECKPOINTS
-0.00010 -0.14187 -0.01561 -0.00933ALONSO_METASTASIS_UP
-0.00018 -0.00009 -0.16227 -0.07729NCI_REMOVAL_OF_LICENSING_FACTORS_FROM_ORIGINS
-0.03211 -0.00011 -0.00627 -0.00029REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION
-0.19943 -0.02032 -0.10956 -0.00563ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN
-0.19936 -0.10560 -0.07638 -0.00046ZHAN_MULTIPLE_MYELOMA_PR_UP
-0.09501 -0.00311 -0.03379 -0.00370REACTOME_ABORTIVE_ELONGATION_OF_HIV1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.00705 -0.00001 -0.00214 -0.00014REACTOME_MRNA_SPLICING
-0.09354 -0.02944 -0.14678 -0.19157REACTOME_RNA_POLYMERASE_I_III_AND_MITOCHONDRIAL_TRANSCRIPTION
-0.06855 -0.02492 -0.11123 -0.03938NCI_HIV_1_ELONGATION_ARREST_AND_RECOVERY
-0.14825 -0.00963 -0.14426 -0.12872REACTOME_GLOBAL_GENOMIC_NER
-0.00026 -0.00022 -0.15341 -0.00303NCI_APC_C_CDC20_MEDIATED_DEGRADATION_OF_SECURIN
-0.04483 -0.00519 -0.00213 -0.00084NCI_FORMATION_OF_THE_HIV_1_EARLY_ELONGATION_COMPLEX
-0.01122 -0.15592 -0.03439 -0.00587MARKEY_RB1_ACUTE_LOF_DN
-0.00274 -0.00004 -0.00188 -0.00085REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS
-0.10346 -0.00087 -0.01564 -0.00673REACTOME_TRANSCRIPTION_COUPLED_NER
-0.07289 -0.00988 -0.00231 -0.00364NCI_MRNA_CAPPING
-0.08969 -0.05167 -0.05385 -0.02748NCI_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE__TO_CCT_TRIC
-0.10401 -0.00321 -0.00354 -0.00227NCI_RNA_POLYMERASE_II_TRANSCRIPTION
-0.05445 -0.02882 -0.05777 -0.16560NCI_MITOTIC_PROMETAPHASE
-0.00461 -0.04603 -0.10708 -0.00156CROONQUIST_NRAS_SIGNALING_DN
-0.17822 -0.02984 -0.04282 -0.00828REACTOME_VIRAL_MESSENGER_RNA_SYNTHESIS
-0.00628 -0.00366 -0.00040 -0.07824ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.01287 -0.00132 -0.03500 -0.17872REACTOME_METABOLISM_OF_RNA
-0.04602 -0.00555 -0.00209 -0.00086NCI_HIV_1_TRANSCRIPTION_ELONGATION
-0.00420 -0.00014 -0.12621 -0.07063REACTOME_DNA_REPLICATION_PRE_INITIATION
-0.05130 -0.00452 -0.00224 -0.00214REACTOME_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.07815 -0.01803 -0.05820 -0.01167NCI_PAUSING_AND_RECOVERY_OF_TAT_MEDIATED_HIV_1_ELONGATION
-0.03752 -0.00557 -0.00353 -0.00413NCI_FORMATION_OF_HIV_1_ELONGATION_COMPLEX_CONTAINING_HIV_1_TAT
-0.00011 -0.00004 -0.13836 -0.00052REACTOME_REGULATION_OF_APC_ACTIVATORS_BETWEEN_G1_S_AND_EARLY_ANAPHASE
-0.10354 -0.02975 -0.06045 -0.00421FURUKAWA_DUSP6_TARGETS_PCI35_DN
-0.00010 -0.00008 -0.18920 -0.00108REACTOME_CDC20_PHOSPHO_APC_MEDIATED_DEGRADATION_OF_CYCLIN_A
-0.04786 -0.08410 -0.19026 -0.10123REACTOME_RNA_POLYMERASE_I_PROMOTER_CLEARANCE
-0.00012 -0.00004 -0.09110 -0.00301REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G
-0.05197 -0.01809 -0.01153 -0.12832DING_LUNG_CANCER_EXPRESSION_BY_COPY_NUMBER
-0.03578 -0.00840 -0.00984 -0.01134NCI_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_
-0.00025 -0.00003 -0.00221 -0.00130WINNEPENNINCKX_MELANOMA_METASTASIS_UP
-0.04874 -0.00459 -0.00192 -0.01010NCI_ELONGATION_OF_INTRON_CONTAINING_TRANSCRIPTS_AND_CO_TRANSCRIPTIONAL_MRNA_SPLICING
-0.00026 -0.12425 -0.00011 -0.00031LEE_LIVER_CANCER_SURVIVAL_DN
-0.09949 -0.00305 -0.00342 -0.00232NCI_RNA_POLYMERASE_II_PROMOTER_ESCAPE
-0.00172 -0.10462 -0.13546 -0.04316LUI_THYROID_CANCER_CLUSTER_3
-0.09140 -0.00365 -0.03056 -0.00129NCI_ABORTIVE_ELONGATION_OF_HIV_1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.00012 -0.00005 -0.13486 -0.00211NCI_UBIQUITIN_DEPENDENT_DEGRADATION_OF_CYCLIN_D1
-0.00018 -0.00011 -0.14365 -0.00106NCI_CDC20_PHOSPHO_APC_C_MEDIATED_DEGRADATION_OF_CYCLIN_A
-0.00385 -0.05214 -0.13184 -0.07808SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_DN
-0.00963 -0.02065 -0.05586 -0.01634CORUM_20S_PROTEASOME
-0.00801 -0.00064 -0.00519 -0.00045REACTOME_MRNA_SPLICING_MINOR_PATHWAY
-0.00031 -0.00007 -0.10943 -0.00098NCI_REGULATION_OF_ORNITHINE_DECARBOXYLASE__ODC_
-0.00049 -0.04057 -0.00123 -0.03574WEST_ADRENOCORTICAL_TUMOR_UP
-0.01271 -0.03945 -0.00075 -0.00022YU_MYC_TARGETS_UP
-0.00017 -0.00011 -0.16542 -0.08791REACTOME_ORC1_REMOVAL_FROM_CHROMATIN
-0.00013 -0.00019 -0.17256 -0.00544REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC
-0.16450 -0.01040 -0.02722 -0.00428CORUM_RNA_POLYMERASE_II_HOLOENZYME_COMPLEX
-0.01030 -0.10557 -0.00766 -0.12889LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_UP
-0.00011 -0.00004 -0.05997 -0.00982REACTOME_S_PHASE
-0.00010 -0.00085 -0.00003 -0.04944BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP
-0.09718 -0.00291 -0.00336 -0.00222NCI_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT
-0.01707 -0.06689 -0.00533 -0.18769RHODES_CANCER_META_SIGNATURE
-0.11297 -0.00282 -0.00380 -0.00224NCI_RNA_POLYMERASE_II_TRANSCRIPTION_INITIATION_AND_PROMOTER_CLEARANCE
-0.02841 -0.00082 -0.02517 -0.00380REACTOME_TRANSCRIPTION
-0.10252 -0.00277 -0.00359 -0.00226NCI_HIV_1_TRANSCRIPTION_PRE_INITIATION
-0.00208 -0.00011 -0.16565 -0.12564REACTOME_M_G1_TRANSITION
-0.00013 -0.00008 -0.16712 -0.04867NCI_SWITCHING_OF_ORIGINS_TO_A_POST_REPLICATIVE_STATE
-0.00604 -0.00047 -0.00221 -0.02230REACTOME_HIV_LIFE_CYCLE
-0.00014 -0.00012 -0.16114 -0.00262NCI_REGULATION_OF_ACTIVATED_PAK_2P34_BY_PROTEASOME_MEDIATED_DEGRADATION
-0.00014 -0.00008 -0.15849 -0.00189NCI_UBIQUITIN_MEDIATED_DEGRADATION_OF_PHOSPHORYLATED_CDC25A
-0.09189 -0.00303 -0.00344 -0.00257NCI_TRANSCRIPTION_OF_THE_HIV_GENOME
-0.00011 -0.00004 -0.12841 -0.00258REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_