BICLUSTER_ID : DNREG-270
PATHOGENS /2/ : yersinia enterocolitica,ehrlichia chaffeensis
TARGETS /79/ : NDUFV1, PSMB1, NDUFS8, RDH11, SDHC, ADH5, NDUFA8, HNMT, NDUFB7, NDUFS6, TRAPPC3, PEBP1, FDPS, LIAS, SUCLA2, DAPK1, QARS, IDH3B, NDUFC1, NDUFB10, NDUFV2, NDUFS5, HRSP12, NDUFS7, PAPSS1, ARL5A, LMAN1, FDX1, NDUFB4, NDUFA9, ACAT2, ALDH6A1, NDUFB6, GLO1, NDUFA4, SDHD, COPG, DHCR7, NNT, NDUFA5, RAF1, NDUFB8, SDHA, ALAD, COMT, SPTLC1, CTNNB1, NDUFB5, NDUFS1, NDUFA6, SLC29A1, DCXR, PPIF, NDUFAB1, NDUFB2, NDUFS3, NFS1, TXNDC12, DLD, PDHB, SDHB, ATP5D, PARK7, PHYH, IDH3G, NDUFB9, ACADM, SEPX1, NDUFB3, PSMD2, RDH14, ACAD8, FADS1, HMGCL, OAT, CDK8, IMPA1, HDAC2, NMNAT1
Gene SetLeading Edge Genes
DIAZ CHRONIC MEYLOGENOUS LEUKEMIA UPPOLR2B, EI24, ICT1, ADH5, NDUFA8, BTBD1, POLD2, ECHS1, ANAPC1, TERF1, SREBF1, SPAG7, EIF2AK1, LMAN1, MARCH6, UBE2G1, SEPHS2, HEBP1, DDB1, ACSL5, ALDH6A1, PRKRA, ATF2, NDUFB6, GLO1, WDR13, CLNS1A, PHB2, FZD7, MRPS35, STK11, TM9SF1, C1QBP, SLC25A11, ALAD, NCBP2, SS18, SPTLC1, ARCN1, TAF6, CTNNBL1, POLR2E, FNTA, HMG20B, DPAGT1, MTX2, ATP5J2, ATP5J, PPA2, MPDU1, SSBP1, OXSR1, CAPN7, NDUFAB1, BAG4, PDHB, COPS2, PHYH, TOMM22, SCARB2, UBE2B, NIT2, CMAS, NCOR1, MAP2K2, ACADM, ACAD8, CNOT8, NUDT6, FADS1, PCYT2, HDAC2, IMPA1, RNF5, MRPS31, AUP1, MYCBP, RBBP4, COPS5, CETN2, PRDX4, NGRN, MRPL49, MRPS30, SOLH, CYC1, CUL4A, ATP5O, CPSF1, PEBP1, FDPS, COPS3, DAPK1, CNIH, PPP2R5C, IDH3B, NBR1, NDUFV2, ABCB6, HRSP12, PAPSS1, HBP1, ARL5A, DPM1, WHSC2, PXMP3, PUS1, PECI, CLPX, SDHD, ERGIC3, NDUFA5, STOML2, COMT, PRKAG1, NDUFB5, ORC5L, RREB1, AHCYL1, LANCL1, PDCD2, SLC29A1, SEP15, MLF2, PGRMC2, ZNF22, APEH, HMBS, CDC37, UPF3B, SH3GLB2, FUSIP1, ACO1, MSH6, OAT, ZMPSTE24, ANP32A, CDK8, KIFAP3, ACLY, HMGCS1, GTF2H4
MOOTHA PGCMRPS18A, MRPS34, SDHA, SACM1L, SLC25A11, COMT, NDUFB5, HSPE1, CYC1, ICT1, NDUFA8, ATP5O, NDUFA6, AMACR, MRPS18B, GUK1, CDC34, COPS3, NDUFAB1, EIF4A2, DDT, MRPL34, NDUFS3, DHX16, NFS1, TIMM8B, NDUFC1, NDUFV2, NDUFS5, ULK1, PDHB, ATP5C1, SDHB, MRPS12, PHYH, IDH3G, UBE2B, FDX1, RPA3, ACADM, MRPL18, SEPX1, NDUFB3, MRPS2, PUS1, APBA3, NDUFB6, PCYT2, COX7C, GTF2H4, MRPL39, STARD7
TIEN INTESTINE PROBIOTICS 24HR UPMRPL9, NDUFA5, C1QBP, ALAD, TRIAP1, EI24, HSPE1, FBXO3, RDH11, MRPS22, NDUFA8, NDUFA6, EMG1, PPIF, DCXR, CYB5B, MRPS18B, ECHS1, POP5, ATP5J, ENTPD4, FDPS, FBXO9, SPAST, NDUFB2, SUCLA2, EBP, NDUFC1, TIMM8B, LRPPRC, NDUFV2, PDHB, MMD, POLR2L, EXOSC7, CUGBP1, GGA2, TFAM, RPA3, PDCD5, NDUFB3, MRPS2, NDUFA9, TUBG1, MSH6, ACAT2, TSN, OAT, NDUFB6, ACLY, IDI1, HMGCS1, STARD7, DHCR7
STARK PREFRONTAL CORTEX 22Q11 DELETION DNARPC5L, TXNDC14, MRPS18A, KRTCAP2, 1110031I02RIK, ATP5H, HSPE1, BSCL2, CYC1, NDUFS8, ADH5, NDUFA8, DDX56, NDUFS6, GUK1, FDPS, LRPAP1, COPS3, PPP2R5C, NDUFB11, TIMM8B, NDUFB10, APOA1BP, NDUFV2, 2410015M20RIK, NDUFS7, COPS6, MRPL41, 3110001D03RIK, MRPS11, SEPHS2, MRPS28, PDCD5, TMEM147, NDUFA9, FKBP2, SRP9, MRPS17, RPL36AL, 2310028O11RIK, CLNS1A, 2810405K02RIK, 2900010M23RIK, IMMP1L, 1110020P15RIK, SEC61B, UQCR, TUSC4, C1QBP, 2310016M24RIK, TMEM126A, DEB1, NDUFS1, MRPS22, UFC1, POLR2J, MKKS, GM561, CHCHD1, HIGD2A, ATP5J, MKI67IP, ATP5E, BCCIP, NDUFAB1, CWF19L1, NDUFB2, PGRMC2, UQCRC2, SRA1, NDUFS3, 2510002D24RIK, ATP5C1, MRPS12, IDH3G, DGCR6, MEA1, LSMD1, TUBG1, BNIP1, D10ERTD322E
CORUM RESPIRATORY CHAIN COMPLEX I BETA SUBUNIT MITOCHONDRIALNDUFB3, NDUFB7, NDUFB6, NDUFA4, NDUFAB1, NDUFB9, NDUFB2, NDUFB5, NDUFB4, NDUFB11, NDUFB10
LASTOWSKA NEUROBLASTOMA COPY NUMBER DNRBBP4, SCAP, DALRD3, TOP2B, ZMYM6, DMAP1, ARHGEF10L, ZCCHC17, EI24, NADK, UBIAD1, UTP11L, ECHS1, PAQR7, ORAOV1, QARS, TIMM8B, ZBTB8OS, MRPS16, SIDT2, WHSC2, FDX1, WDR8, JAGN1, PTS, SNX19, CLNS1A, TMEM115, PCGF6, MRPL48, AP3M1, CPSF3L, DDX50, ATP5I, INTS4, RAF1, DNAJC11, NGLY1, NUDC, TMEM126A, RPUSD4, CTNNB1, ELOVL1, CHCHD1, DPAGT1, OXSR1, CAPN7, SEC24C, PEX14, CWF19L1, ZMYM1, HERC4, APEH, MIB2, MED8, HMBS, SDHB, NSUN4, USP48, PARK7, UBP1, PPCS, IQSEC1, ACAD8, HMGCL, ZMPSTE24, DHX30, MRPL43, NMNAT1
REACTOME CITRIC ACID CYCLEDLST, NNT, DLD, SDHB, SDHA, IDH3G, SDHD, SUCLA2, IDH3B, SDHC
CORUM RESPIRATORY CHAIN COMPLEX I LAMBDA SUBUNIT MITOCHONDRIALNDUFS6, NDUFV2, NDUFS7, NDUFA5, NDUFV1, NDUFS8, NDUFS1, NDUFS3
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 17COPS5, MRPL2, MRPS34, KRTCAP2, 1500032L24RIK, EI24, EXOC7, MRPS22, UFC1, ICT1, NDUFB7, PDCD2, VPS25, NDUFAB1, LRPAP1, DDT, MRPL34, MRPL16, LIAS, NDUFS3, GRPEL1, CNIH, STUB1, HMBS, 2310003F16RIK, NDUFV2, SDHB, COPS6, MRPS7, MRPS12, MRPS11, NDUFB9, PTPLAD1, MRPL36, DNAJC19, NDUFB6, CSNK2B, HMGCS1, PHB2, STARD7
NCI CITRIC ACID CYCLE TCA CYCLE IDH3G, SDHB, SDHD, SUCLA2, SDHC, IDH3B, SDHA
CORUM RESPIRATORY CHAIN COMPLEX I INCOMPLETE INTERMEDIATE MITOCHONDRIALNDUFA9, NDUFS6, NDUFV2, NDUFS7, NDUFS1, NDUFB8, NDUFV1
SHEN SMARCA2 TARGETS UPRAF1, PEX11B, MTO1, SS18, SPTLC1, FBXO3, FBXW2, CUL4A, HNMT, MKKS, NUMB, ATP5O, RAB14, LANCL1, RMND5A, NSFL1C, CAPN7, UQCRC2, TNPO1, PPP2R5C, NBR1, UBR2, CTCF, TTRAP, NOL7, PDHB, UPF3B, MOCS2, COPS2, RAB40B, DPM1, FUSIP1, UBE2G1, NCOR1, SRP14, CUL4B, PCMTD2, AGGF1, SRP9, RDH14, PRKRA, TSN, ANP32A, NDUFB6, KIFAP3, SDHD, RHOT1, MRPS14, TRIP4
PELLICCIOTTA HDAC IN ANTIGEN PRESENTATION UPTXNDC12, ERGIC3, SAR1B, SAR1A, COPE, PSMB1, SEC22A, SEC22B, TRAPPC1, PSMC4, WFS1, COPZ1, PSMD2, TRAPPC3, PSMD6, TMED9, PDIA4, PSMB3, COPG, KDELR2
CORUM RESPIRATORY CHAIN COMPLEX I EARLY INTERMEDIATE NDUFAF1 ASSEMBLY MITOCHONDRIALNDUFA6, NDUFB6, NDUFA9, NDUFAF1, NDUFS7, NDUFS3
MORI PLASMA CELL UPLMAN1, RPN1, TMEM39A, BET1, EBP, SSR2
CORUM F1F0-ATP SYNTHASE EC 3.6.3.14 MITOCHONDRIALATP5O, ATP5I, ATP5C1, ATP5D, ATP5G1, ATP5J2, ATP5J, ATP5E, ATP5H, ATP5F1
PENG RAPAMYCIN RESPONSE DNPSMD5, NDUFA9, ATP5G1, JTB, TGDS, CHUK, MRPS11, STRA13, MRPL12, HSPE1, RABGGTB
REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLINGATP5O, ATP5I, ATP5C1, ATP5D, ATP5G1, ATP5J2, ATP5J, ATP5E, ATP5H, ATP5F1
NCI FORMATION OF ATP BY CHEMIOSMOTIC COUPLINGATP5O, ATP5I, ATP5C1, ATP5D, ATP5G1, ATP5J2, ATP5J, ATP5E, ATP5H, ATP5F1
NCI FORMATION OF HIV 1 ELONGATION COMPLEX CONTAINING HIV 1 TATPOLR2E, RDBP, POLR2F, POLR2I, POLR2L, WHSC2, POLR2B, NCBP2, GTF2H4, POLR2J
NCI RNA POL II CTD PHOSPHORYLATION AND INTERACTION WITH CE
NCI RNA POL II CTD PHOSPHORYLATION AND INTERACTION WITH CE1
NCI TAT MEDIATED ELONGATION OF THE HIV 1 TRANSCRIPT
CORUM RESPIRATORY CHAIN COMPLEX I INTERMEDIATE VII/650KD MITOCHONDRIAL
REACTOME RNA POL II CTD PHOSPHORYLATION AND INTERACTION WITH CE
REACTOME GENE EXPRESSION
REACTOME ABORTIVE ELONGATION OF HIV1 TRANSCRIPT IN THE ABSENCE OF TATWHSC2, POLR2E, POLR2B, RDBP, NCBP2, POLR2F, POLR2I, POLR2L, POLR2J
REACTOME RNA POLYMERASE I III AND MITOCHONDRIAL TRANSCRIPTION
REACTOME MICRORNA BIOGENESISPOLR2E, POLR2B, POLR2F, POLR2I, POLR2L, POLR2J
NCI FORMATION OF THE HIV 1 EARLY ELONGATION COMPLEXPOLR2E, RDBP, POLR2F, POLR2I, POLR2L, WHSC2, POLR2B, NCBP2, GTF2H4, POLR2J
CORUM RAP1 COMPLEXTERF2IP, XRCC5, TERF1
NCI ABORTIVE ELONGATION OF HIV 1 TRANSCRIPT IN THE ABSENCE OF TATWHSC2, POLR2E, POLR2B, RDBP, NCBP2, POLR2F, POLR2I, POLR2L, POLR2J
CORUM CNS-P53 COMPLEXCOPS3, GPS1, COPS5, COPS7A, COPS6, COPS2
CORUM CSA COMPLEXDDB1, COPS3, GPS1, COPS5, COPS7A, COPS6, COPS2, CUL4A
NCI MRNA CAPPINGPOLR2E, POLR2F, POLR2I, POLR2L, POLR2B, NCBP2, GTF2H4, POLR2J
NCI FORMATION OF THE EARLY ELONGATION COMPLEXPOLR2E, RDBP, POLR2F, POLR2I, POLR2L, WHSC2, POLR2B, NCBP2, GTF2H4, POLR2J
CORUM COP9 SIGNALOSOME COMPLEXCOPS3, GPS1, COPS5, COPS7A, COPS6, COPS2
REACTOME HIV1 TRANSCRIPTION ELONGATIONPOLR2E, RDBP, POLR2F, POLR2I, POLR2L, WHSC2, POLR2B, NCBP2, GTF2H4, POLR2J
REACTOME TRANSCRIPTIONRDBP, RRN3, UPF3B, POLR2L, TCEB2, POLR2I, GTF3C4, WHSC2, POLR2B, NCBP2, TFAM, TAF6, MNAT1, POLR2J, TFB2M, POLR2E, POLR2F, CPSF1, SFRS2, NFIC, CSTF1, GTF2H4, SNAPC2
NCI HIV 1 TRANSCRIPTION ELONGATIONPOLR2E, RDBP, POLR2F, POLR2I, POLR2L, WHSC2, POLR2B, NCBP2, GTF2H4, POLR2J
CORUM CSA-POLIIA COMPLEXDDB1, COPS3, GPS1, COPS5, COPS7A, COPS6, COPS2, CUL4A
REACTOME FORMATION OF THE EARLY ELONGATION COMPLEXPOLR2E, RDBP, POLR2F, POLR2I, POLR2L, WHSC2, POLR2B, NCBP2, GTF2H4, POLR2J
NCI MICRORNA MIRNA BIOGENESISPOLR2E, POLR2B, POLR2F, POLR2I, POLR2L, POLR2J
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
yersinia enterocolitica wap bl6yersinia enterocolitica p60 bl6yersinia enterocolitica p60 bcehrlichia chaffeensis wakullaGeneSet Name
-0.00284 -0.08381 -0.07649 -0.14549DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP
-0.01074 -0.13651 -0.03396 -0.00018MOOTHA_PGC
-0.00084 -0.10678 -0.06732 -0.12429TIEN_INTESTINE_PROBIOTICS_24HR_UP
-0.00009 -0.00198 -0.00010 -0.00137STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN
-0.00595 -0.00387 -0.00411 -0.00005CORUM_RESPIRATORY_CHAIN_COMPLEX_I_BETA_SUBUNIT_MITOCHONDRIAL
-0.00991 -0.01597 -0.05026 -0.13057LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN
-0.03557 -0.10874 -0.13372 -0.00001REACTOME_CITRIC_ACID_CYCLE
-0.00160 -0.01607 -0.00649 -0.00073CORUM_RESPIRATORY_CHAIN_COMPLEX_I_LAMBDA_SUBUNIT_MITOCHONDRIAL
-0.00016 -0.00815 -0.00005 -0.00027YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_17
-0.06406 -0.13143 -0.09501 -0.00032NCI_CITRIC_ACID_CYCLE__TCA_CYCLE_
-0.05138 -0.03728 -0.04349 -0.00088CORUM_RESPIRATORY_CHAIN_COMPLEX_I_INCOMPLETE_INTERMEDIATE_MITOCHONDRIAL
-0.00846 -0.02123 -0.07407 -0.01724SHEN_SMARCA2_TARGETS_UP
-0.00206 -0.07348 -0.00247 -0.12670PELLICCIOTTA_HDAC_IN_ANTIGEN_PRESENTATION_UP
-0.04123 -0.07402 -0.18485 -0.00697CORUM_RESPIRATORY_CHAIN_COMPLEX_I_EARLY_INTERMEDIATE_NDUFAF1_ASSEMBLY_MITOCHONDRIAL
-0.02979 -0.14489 -0.02962 -0.01193MORI_PLASMA_CELL_UP
-0.05147 -0.03737 -0.11532 -0.00052CORUM_F1F0-ATP_SYNTHASE_EC_3.6.3.14_MITOCHONDRIAL
-0.00061 -0.14686 -0.07787 -0.07297PENG_RAPAMYCIN_RESPONSE_DN
-0.05761 -0.03980 -0.11943 -0.00013REACTOME_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING
-0.06924 -0.04768 -0.12019 -0.00018NCI_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING
-0.00007 -0.00042 -0.00029 -0.14676NCI_FORMATION_OF_HIV_1_ELONGATION_COMPLEX_CONTAINING_HIV_1_TAT
-0.00020 -0.00218 -0.00489 -0.18257NCI_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE
-0.00034 -0.00215 -0.00410 -0.17995NCI_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE1
-0.00008 -0.00105 -0.00030 -0.19991NCI_TAT_MEDIATED_ELONGATION_OF_THE_HIV_1_TRANSCRIPT
-0.01828 -0.02913 -0.05634 -0.00883CORUM_RESPIRATORY_CHAIN_COMPLEX_I_INTERMEDIATE_VII/650KD_MITOCHONDRIAL
-0.00020 -0.00150 -0.00325 -0.17614REACTOME_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE
-0.00775 -0.18527 -0.03712 -0.19461REACTOME_GENE_EXPRESSION
-0.00017 -0.00441 -0.00297 -0.17325REACTOME_ABORTIVE_ELONGATION_OF_HIV1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.10523 -0.07686 -0.01193 -0.17629REACTOME_RNA_POLYMERASE_I_III_AND_MITOCHONDRIAL_TRANSCRIPTION
-0.00117 -0.00532 -0.00895 -0.16782REACTOME_MICRORNA_BIOGENESIS
-0.00007 -0.00217 -0.00108 -0.07621NCI_FORMATION_OF_THE_HIV_1_EARLY_ELONGATION_COMPLEX
-0.07021 -0.14833 -0.15231 -0.15855CORUM_RAP1_COMPLEX
-0.00012 -0.00766 -0.00211 -0.17402NCI_ABORTIVE_ELONGATION_OF_HIV_1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.01095 -0.10415 -0.11800 -0.16405CORUM_CNS-P53_COMPLEX
-0.00116 -0.09084 -0.02349 -0.11636CORUM_CSA_COMPLEX
-0.00012 -0.00218 -0.00255 -0.11563NCI_MRNA_CAPPING
-0.00009 -0.00191 -0.00090 -0.07607NCI_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.01606 -0.14742 -0.10834 -0.13885CORUM_COP9_SIGNALOSOME_COMPLEX
-0.00007 -0.00043 -0.00019 -0.14824REACTOME_HIV1_TRANSCRIPTION_ELONGATION
-0.00010 -0.00229 -0.00030 -0.17599REACTOME_TRANSCRIPTION
-0.00009 -0.00221 -0.00070 -0.07875NCI_HIV_1_TRANSCRIPTION_ELONGATION
-0.00160 -0.08356 -0.03686 -0.11615CORUM_CSA-POLIIA_COMPLEX
-0.00007 -0.00145 -0.00063 -0.07924REACTOME_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.00045 -0.00596 -0.00897 -0.17166NCI_MICRORNA__MIRNA__BIOGENESIS