BICLUSTER_ID : DNREG-272
PATHOGENS /3/ : pseudomonas aeruginosa,aggregatibacter actinomycetemcomitans,aeromonas caviae
TARGETS /21/ : MMP12, HMGCR, TARS, PSAT1, ALDH9A1, NDUFA2, SDHC, TYMS, CALM2, CDK6, NDUFA6, NDUFB3, NDUFS6, PCMT1, HMOX1, PEBP1, SUCLG1, NDUFB6, TK1, NDUFB2, NDUFC1
Gene SetLeading Edge Genes
KEGG PARKINSONS DISEASECOX5A, UQCRH, NDUFA2, SDHC, ATP5O, NDUFA6, NDUFB3, NDUFS6, ATP5A1, COX6B1, UQCRQ, NDUFB6, COX6C, NDUFB2, COX7C, NDUFC1
LINDGREN BLADDER CANCER CLUSTER 3 UPRFC3, PCNA, RRM2, ATAD2, TMPO, H2AFZ, CCNB1, CENPA, TARS, PLK4, RBBP7, E2F8, ALDH9A1, MCM4, TYMS, CCNB2, HMOX1, TFRC, PEBP1, NASP, SUCLG1, RAD51, PARD6B, TK1, BIRC5
WHITEFORD PEDIATRIC CANCER MARKERSCDK6, PCNA, RECQL4, RRM2, MLF1IP, TMPO, CCNB1, CENPA, PLK4, PSAT1, TK1, BIRC5, MCM4
ZHANG BREAST CANCER PROGENITORS UPRRM2, NVL, MTDH, TMPO, H2AFZ, HELLS, MRPS33, PSAT1, PBK, SHCBP1, CALM2, SYNCRIP, SSB, ENPP3, RAD51, PCYOX1, LSM5, NDUFC1, PUS7L
PUJANA CHEK2 PCC NETWORKRFC3, PCNA, MTDH, RRM2, HMGCR, POLE3, TMPO, CCNB1, ZNHIT3, PLK4, RBM34, MNAT1, NDUFB3, PCMT1, RECQL4, SSB, TFRC, UNG, KHDRBS1, CCNE2, POLE2, DNAJC9, COPS3, PRDX3, IDI1
SHEDDEN LUNG CANCER POOR SURVIVAL A6RFC3, PCNA, MMP12, RRM2, ATAD2, GPR19, PSAT1, MCM10, E2F8, SHCBP1, HMMR, PCMT1, RECQL4, CCNE2, HEXIM1, POLE2, BIRC5
BLUM RESPONSE TO SALIRASIB DNBUB1B, RFC3, PCNA, RRM2, TMPO, H2AFZ, RAB40B, CENPA, PLK4, RBBP7, PBK, HMMR, NDUFA2, NDUFB3, RGS2, RECQL4, CCNE2, POLE2, PRDX3, RAD51, CHST12
RHEIN ALL GLUCOCORTICOID THERAPY DNBUB1B, PRDX6, PCNA, SCCPDH, RRM2, MLF1IP, CCT6A, E2F8, SHCBP1, HMMR, ACAA2, SDHC, MCM4, PCMT1, UNG, POLE2, RAD51, PRDX3, ING2, GBE1, LSM5, ATP5L, BIRC5
CROONQUIST IL6 DEPRIVATION DNBUB1B, RFC3, PCNA, RRM2, CCNB1, CENPA, PLK4, OIP5, HMMR, MCM4, TYMS, CCNB2, NASP, CCNE2, POLE2, TK1
REACTOME CELL CYCLE MITOTICBUB1B, PSMC5, RFC3, CEP76, PCNA, RRM2, MLF1IP, CCNB1, CENPA, PLK4, MCM10, MNAT1, MCM4, CENPJ, CDK6, CCNE2, POLE2, NDE1, BIRC5
GRAHAM CML DIVIDING VS NORMAL QUIESCENT UPBUB1B, RFC3, CEP76, RRM2, MLF1IP, CCNB1, CENPA, PBK, MCM10, E2F8, OIP5, HMMR, HSPA14, MCM4, AMMECR1, SYNCRIP, CCNE2, POLE2, RAD51, TK1, LSM5, BIRC5
GRAHAM NORMAL QUIESCENT VS NORMAL DIVIDING DNBUB1B, AMMECR1, RFC3, CCNB2, PCNA, RRM2, MLF1IP, CCNE2, CDC45L, POLE2, MCM10, BIRC5, MCM4, TYMS
LI WILMS TUMOR VS FETAL KIDNEY 1 DN
REACTOME CELL CYCLE CHECKPOINTS
LEE EARLY T LYMPHOCYTE UP
MORI IMMATURE B LYMPHOCYTE DNRAD51, E2F8, MCM10, RRM2, CCNB1, CENPA
NCI PYRIMIDINE BIOSYNTHESIS INTERCONVERSION
ODONNELL TARGETS OF MYC AND TFRC DN
NCI FOLDING OF ACTIN BY CCT TRIC
ZHAN MULTIPLE MYELOMA PR UP
REACTOME NUCLEOTIDE EXCISION REPAIRERCC3, RFC3, PCNA, POLR2C, POLE2, MNAT1, POLR2G
NCI COOPERATION OF PREFOLDIN AND TRIC CCT IN ACTIN AND TUBULIN FOLDING
REACTOME MITOTIC PROMETAPHASE
WINNEPENNINCKX MELANOMA METASTASIS UPPCNA, ENY2, RRM2, SHCBP1, CCNB1, BIRC5, CENPA
REACTOME GLOBAL GENOMIC NER
NUYTTEN EZH2 TARGETS DN
CORUM CCT MICRO-COMPLEX
MUELLER PLURINETBUB1B, RFC3, PCNA, RECQL4, CASP6, SSB, TMPO, CCNB1, RAD51, COPS3, MCM10, HMMR, MNAT1, MCM4, BIRC5
MARKEY RB1 ACUTE LOF DNPCNA, RRM2, TMPO, H2AFZ, CCNB1, CENPA, DNAJC9, RAD51, E2F8, ZMYND11, BIRC5
NCI CHAPERONIN MEDIATED PROTEIN FOLDING
REACTOME METABOLISM OF PROTEINS
HOFFMANN LARGE TO SMALL PRE BII LYMPHOCYTE UP
STEIN ESRRA TARGETS RESPONSIVE TO ESTROGEN DN
REACTOME TRANSCRIPTION COUPLED NERERCC3, RFC3, PCNA, POLR2C, POLE2, MNAT1, POLR2G
MORI MATURE B LYMPHOCYTE DN
NCI MITOTIC PROMETAPHASE
YU MYC TARGETS UPCKS2, PCNA, E2F8, IDI1, BRCA2, CCNB1, BIRC5
CROONQUIST NRAS SIGNALING DN
BOYAULT LIVER CANCER SUBCLASS G23 UP
FERREIRA EWINGS SARCOMA UNSTABLE VS STABLE UP
EGUCHI CELL CYCLE RB1 TARGETS
RUIZ TNC TARGETS DNATAD2, RRM2, MLF1IP, TMPO, CCNE2, MCM10, E2F8, SHCBP1, NMT2, BIRC5
REACTOME G1 S TRANSITION
NCI ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESISCCT2, CCT5, TCP1, CCT3, CCT6A
FOURNIER ACINAR DEVELOPMENT LATE 2
GARGALOVIC RESPONSE TO OXIDIZED PHOSPHOLIPIDS TURQUOISE DN
REACTOME S PHASE
MORI LARGE PRE BII LYMPHOCYTE UP
KEGG CELL CYCLE
NCI FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC
VANTVEER BREAST CANCER METASTASIS DN
REACTOME SYNTHESIS OF DNA
REACTOME MITOTIC M M G1 PHASESBUB1B, PSMC5, MLF1IP, NDE1, BIRC5, MCM4, CENPA
MISSIAGLIA REGULATED BY METHYLATION DN
STEIN ESR1 TARGETS
REACTOME INFLUENZA LIFE CYCLE
KEGG NUCLEOTIDE EXCISION REPAIRERCC3, RFC3, PCNA, POLE3, POLE2, MNAT1, GTF2H5
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
pseudomonas aeruginosa fdr440aeromonas caviaaggregatibacter actinomycetemcomitansGeneSet Name
-0.17643 -0.00031 -0.01663KEGG_PARKINSONS_DISEASE
-0.10513 -0.00804 -0.00227LINDGREN_BLADDER_CANCER_CLUSTER_3_UP
-0.00049 -0.01546 -0.00052WHITEFORD_PEDIATRIC_CANCER_MARKERS
-0.02082 -0.02211 -0.01073ZHANG_BREAST_CANCER_PROGENITORS_UP
-0.02238 -0.00037 -0.00106PUJANA_CHEK2_PCC_NETWORK
-0.16572 -0.00092 -0.00025SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6
-0.01451 -0.01909 -0.00008BLUM_RESPONSE_TO_SALIRASIB_DN
-0.00439 -0.00008 -0.04316RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN
-0.00002 -0.02538 -0.00045CROONQUIST_IL6_DEPRIVATION_DN
-0.00616 -0.01738 -0.01005REACTOME_CELL_CYCLE_MITOTIC
-0.02525 -0.00002 -0.00007GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP
-0.00001 -0.01453 -0.00150GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_DN
-0.03186 -0.04133 -0.14017LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN
-0.08869 -0.12741 -0.02580REACTOME_CELL_CYCLE_CHECKPOINTS
-0.00127 -0.13798 -0.00008LEE_EARLY_T_LYMPHOCYTE_UP
-0.00193 -0.01113 -0.00118MORI_IMMATURE_B_LYMPHOCYTE_DN
-0.16804 -0.00938 -0.12101NCI_PYRIMIDINE_BIOSYNTHESIS__INTERCONVERSION_
-0.00593 -0.10956 -0.00563ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN
-0.13307 -0.02763 -0.14171NCI_FOLDING_OF_ACTIN_BY_CCT_TRIC
-0.00846 -0.07638 -0.00046ZHAN_MULTIPLE_MYELOMA_PR_UP
-0.00513 -0.02788 -0.00561REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.16963 -0.04333 -0.07934NCI_COOPERATION_OF_PREFOLDIN_AND_TRIC_CCT__IN_ACTIN_AND_TUBULIN_FOLDING
-0.16847 -0.01572 -0.06546REACTOME_MITOTIC_PROMETAPHASE
-0.00990 -0.00221 -0.00130WINNEPENNINCKX_MELANOMA_METASTASIS_UP
-0.00065 -0.14426 -0.12872REACTOME_GLOBAL_GENOMIC_NER
-0.00193 -0.09241 -0.12376NUYTTEN_EZH2_TARGETS_DN
-0.17059 -0.04334 -0.07738CORUM_CCT_MICRO-COMPLEX
-0.14959 -0.01895 -0.04867MUELLER_PLURINET
-0.07746 -0.03439 -0.00587MARKEY_RB1_ACUTE_LOF_DN
-0.17039 -0.04260 -0.08268NCI_CHAPERONIN_MEDIATED_PROTEIN_FOLDING
-0.16796 -0.12255 -0.07065REACTOME_METABOLISM_OF_PROTEINS
-0.02516 -0.08582 -0.02363HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP
-0.00006 -0.01329 -0.07201STEIN_ESRRA_TARGETS_RESPONSIVE_TO_ESTROGEN_DN
-0.01975 -0.01564 -0.00673REACTOME_TRANSCRIPTION_COUPLED_NER
-0.06272 -0.04616 -0.14568MORI_MATURE_B_LYMPHOCYTE_DN
-0.17181 -0.05777 -0.16560NCI_MITOTIC_PROMETAPHASE
-0.04480 -0.00075 -0.00022YU_MYC_TARGETS_UP
-0.00026 -0.10708 -0.00156CROONQUIST_NRAS_SIGNALING_DN
-0.15757 -0.01335 -0.12897BOYAULT_LIVER_CANCER_SUBCLASS_G23_UP
-0.00810 -0.15511 -0.00030FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS_STABLE_UP
-0.00126 -0.16160 -0.03978EGUCHI_CELL_CYCLE_RB1_TARGETS
-0.14933 -0.00114 -0.00315RUIZ_TNC_TARGETS_DN
-0.18368 -0.03437 -0.01052REACTOME_G1_S_TRANSITION
-0.14506 -0.04302 -0.03103NCI_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS
-0.16190 -0.00027 -0.07933FOURNIER_ACINAR_DEVELOPMENT_LATE_2
-0.00781 -0.13196 -0.06733GARGALOVIC_RESPONSE_TO_OXIDIZED_PHOSPHOLIPIDS_TURQUOISE_DN
-0.01808 -0.05997 -0.00982REACTOME_S_PHASE
-0.00134 -0.08123 -0.04933MORI_LARGE_PRE_BII_LYMPHOCYTE_UP
-0.18558 -0.16594 -0.19479KEGG_CELL_CYCLE
-0.16898 -0.04639 -0.08619NCI_FORMATION_OF_TUBULIN_FOLDING_INTERMEDIATES_BY_CCT_TRIC
-0.01534 -0.00876 -0.06593VANTVEER_BREAST_CANCER_METASTASIS_DN
-0.02563 -0.13465 -0.02170REACTOME_SYNTHESIS_OF_DNA
-0.16003 -0.02749 -0.00853REACTOME_MITOTIC_M_M_G1_PHASES
-0.00001 -0.05423 -0.07337MISSIAGLIA_REGULATED_BY_METHYLATION_DN
-0.19857 -0.05930 -0.19165STEIN_ESR1_TARGETS
-0.00003 -0.08267 -0.02323REACTOME_INFLUENZA_LIFE_CYCLE
-0.00033 -0.02124 -0.04266KEGG_NUCLEOTIDE_EXCISION_REPAIR