BICLUSTER_ID : DNREG-366
PATHOGENS /4/ : pseudomonas aeruginosa,escherichia coli,porphyromonas gingivalis,ehrlichia chaffeensis
TARGETS /16/ : DUT, SHMT2, CAD, PCCB, GMPS, PPIG, HADH, SLC25A5, SDHA, AURKA, CAT, GLO1, MCM7, RRM1, DARS2, SHMT1
Gene Set | Leading Edge Genes |
---|---|
RHEIN ALL GLUCOCORTICOID THERAPY DN | SHMT2, INTS8, MCM2, STMN1, MRPL3, CAT, RRM1, CCNG1, RFC4, ACAA2, DTL, DUT, GMPS, PCCB, MCM5, NUP37, HADH, POLE2, ANP32A, TMEM135, GLO1 |
PUJANA CHEK2 PCC NETWORK | SHMT2, CENPC1, CAD, POLE3, MCM2, MRPL3, RFC4, OIP5, ANAPC5, RFC5, TOPBP1, CENPF, CNOT1, DUT, MCM3, GMPS, MCM5, PPIG, SLC25A5, ATM, MRE11A, FDFT1, DDX46, NUP88, H2AFV, IDI1, KIF2C |
CASORELLI ACUTE PROMYELOCYTIC LEUKEMIA DN | KIF4A, SHMT2, MCM3, CDC25C, HADH, SDHA, GLO1, IDI1, RFC4, KIF2C |
MISSIAGLIA REGULATED BY METHYLATION DN | DUT, CAD, GMPS, LANCL1, MCM5, CDC25C, CECR5, SHMT1, RFC4, CENPF |
FOURNIER ACINAR DEVELOPMENT LATE 2 | CAD, POLE3, CDC45L, MCM2, MRPL3, HPS1, DTL, DUT, KIF4A, MCM3, PMS1, MCM7, H2AFV, IDI1, KIF2C, NIF3L1, HMBS |
MITSIADES RESPONSE TO APLIDIN DN | KIF4A, PRPF8, CAD, GMPS, MCM5, MCM2, DDX46, RFC4, TOPBP1, CENPF, CNOT1 |
MORI IMMATURE B LYMPHOCYTE DN | DTL, MCM2, CENPA, MCM7, RRM1, H2AFV, PRC1, PRIM1 |
MOLENAAR TARGETS OF CCND1 AND CDK4 DN | KIF4A, DTL, KIF20A, TPX2, AURKA, MCM7, RFC5, KIF2C, CENPF |
KOBAYASHI EGFR SIGNALING 24HR DN | KIF4A, DUT, DTL, MCM3, TPX2, MCM5, MCM2, MCM7, PBK, PRC1, RFC4, HMMR, PSRC1, RFC5, KIF2C |
WONG EMBRYONIC STEM CELL CORE | KIF4A, KIF20A, MCM3, MCM5, HADH, MCM2, IPO9, DARS2 |
KAUFFMANN DNA REPAIR GENES | DUT, POLE3, MLH1, TDP1, PMS1, MSH3, ATM, RRM1, RAD50, XPC, MRE11A, RFC4, NEIL3, ERCC2, TOPBP1, RFC5 |
MANALO HYPOXIA DN | MCM3, CAD, NVL, MCM5, MCM2, OIP5, RFC5, NUP43, NIF3L1, HMBS |
SHEDDEN LUNG CANCER POOR SURVIVAL A6 | KIF4A, CAD, FCHO1, MCM5, CDC25C, MTIF2, RFC4, HMMR, OIP5, PSRC1, NEIL3, KIF2C, CENPF |
REACTOME CELL CYCLE MITOTIC | KIF20A, CDK5RAP2, CENPC1, MCM2, PRKACA, RFC4, TSGA14, ANAPC5, RFC5, CENPF, NUP85, MCM3, MCM5, CDC25C, NUP37, NUP43, KIF2C, NDE1 |
LI WILMS TUMOR VS FETAL KIDNEY 1 DN | |
REACTOME CELL CYCLE CHECKPOINTS | ATM, MCM3, RFC4, MCM5, CDC25C, ANAPC5, MCM2 |
ZHAN MULTIPLE MYELOMA PR UP | |
ODONNELL TFRC TARGETS DN | |
REACTOME GLOBAL GENOMIC NER | ERCC2 |
REACTOME DNA STRAND ELONGATION | MCM3, RFC4, MCM5, MCM2 |
TOYOTA TARGETS OF MIR34B AND MIR34C | |
NCI ACTIVATION OF THE PRE REPLICATIVE COMPLEX | |
REACTOME EXTENSION OF TELOMERES | |
KEGG DNA REPLICATION | MCM3, POLE3, RFC4, MCM5, MCM2 |
BIDUS METASTASIS UP | |
EGUCHI CELL CYCLE RB1 TARGETS | KIF20A, MCM3, MCM5, CDC25C, MCM2 |
NCI UNWINDING OF DNA | |
REACTOME S PHASE | |
REACTOME DNA REPAIR | TDP1, ATM, RAD50, XPC, MRE11A, RFC4, RFC5, ERCC2 |
REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX | |
KEGG BASE EXCISION REPAIR | |
REACTOME SYNTHESIS OF DNA | |
REACTOME UNWINDING OF DNA | |
FUJII YBX1 TARGETS DN | |
KEGG NUCLEOTIDE EXCISION REPAIR | XPC, POLE3, RFC4, ERCC2, RFC5 |
Color legend | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
q-value | -1 | -0.2 | -0.05 | -0.01 | -0.001 | -0.0001 | |||||
Color |
pseudomonas aeruginosa fdr440 | porphyromonas gingivalis | escherichia coli | ehrlichia chaffeensis liberty | GeneSet Name |
---|---|---|---|---|
-0.00439 | -0.00437 | -0.01385 | -0.08669 | RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN |
-0.02238 | -0.00364 | -0.01673 | -0.17936 | PUJANA_CHEK2_PCC_NETWORK |
-0.08117 | -0.00446 | -0.09530 | -0.12436 | CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_DN |
-0.00001 | -0.00095 | -0.00002 | -0.08244 | MISSIAGLIA_REGULATED_BY_METHYLATION_DN |
-0.16190 | -0.00037 | -0.09170 | -0.02119 | FOURNIER_ACINAR_DEVELOPMENT_LATE_2 |
-0.00006 | -0.02682 | -0.00002 | -0.08816 | MITSIADES_RESPONSE_TO_APLIDIN_DN |
-0.00193 | -0.02597 | -0.00005 | -0.07682 | MORI_IMMATURE_B_LYMPHOCYTE_DN |
-0.07519 | -0.02688 | -0.00017 | -0.08292 | MOLENAAR_TARGETS_OF_CCND1_AND_CDK4_DN |
-0.05049 | -0.00406 | -0.00476 | -0.16719 | KOBAYASHI_EGFR_SIGNALING_24HR_DN |
-0.11079 | -0.00002 | -0.00075 | -0.00681 | WONG_EMBRYONIC_STEM_CELL_CORE |
-0.00283 | -0.03015 | -0.00003 | -0.08733 | KAUFFMANN_DNA_REPAIR_GENES |
-0.14929 | -0.00004 | -0.00285 | -0.00680 | MANALO_HYPOXIA_DN |
-0.16572 | -0.00219 | -0.00959 | -0.14253 | SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6 |
-0.00616 | -0.00002 | -0.00008 | -0.14637 | REACTOME_CELL_CYCLE_MITOTIC |
-0.03186 | -0.18322 | -0.00499 | -0.12543 | LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN |
-0.08869 | -0.00004 | -0.03627 | -0.05832 | REACTOME_CELL_CYCLE_CHECKPOINTS |
-0.00846 | -0.10560 | -0.00002 | -0.12250 | ZHAN_MULTIPLE_MYELOMA_PR_UP |
-0.00049 | -0.17256 | -0.00011 | -0.11168 | ODONNELL_TFRC_TARGETS_DN |
-0.00065 | -0.00963 | -0.00018 | -0.14181 | REACTOME_GLOBAL_GENOMIC_NER |
-0.00002 | -0.01190 | -0.00005 | -0.02104 | REACTOME_DNA_STRAND_ELONGATION |
-0.01706 | -0.08221 | -0.00006 | -0.17694 | TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C |
-0.00048 | -0.11982 | -0.00008 | -0.06463 | NCI_ACTIVATION_OF_THE_PRE_REPLICATIVE_COMPLEX |
-0.06304 | -0.04101 | -0.00295 | -0.12466 | REACTOME_EXTENSION_OF_TELOMERES |
-0.00014 | -0.01633 | -0.00035 | -0.05540 | KEGG_DNA_REPLICATION |
-0.17970 | -0.03629 | -0.00302 | -0.12771 | BIDUS_METASTASIS_UP |
-0.00126 | -0.03363 | -0.00006 | -0.08972 | EGUCHI_CELL_CYCLE_RB1_TARGETS |
-0.00281 | -0.14377 | -0.02928 | -0.11524 | NCI_UNWINDING_OF_DNA |
-0.01808 | -0.00004 | -0.17828 | -0.16739 | REACTOME_S_PHASE |
-0.00009 | -0.00081 | -0.00022 | -0.10973 | REACTOME_DNA_REPAIR |
-0.00108 | -0.18492 | -0.00002 | -0.06039 | REACTOME_ACTIVATION_OF_THE_PRE_REPLICATIVE_COMPLEX |
-0.00163 | -0.05239 | -0.00057 | -0.18700 | KEGG_BASE_EXCISION_REPAIR |
-0.02563 | -0.00002 | -0.17829 | -0.11584 | REACTOME_SYNTHESIS_OF_DNA |
-0.00308 | -0.16817 | -0.01773 | -0.17008 | REACTOME_UNWINDING_OF_DNA |
-0.00037 | -0.11857 | -0.00002 | -0.05731 | FUJII_YBX1_TARGETS_DN |
-0.00033 | -0.00290 | -0.00032 | -0.11031 | KEGG_NUCLEOTIDE_EXCISION_REPAIR |