BICLUSTER_ID : DNREG-372
PATHOGENS /2/ : streptococcus pyogenes,helicobacter pylori
TARGETS /109/ : MMACHC, NDUFA3, MGST3, ACADSB, ACY1, HLCS, CDK4, AK1, SPARC, PCCA, NDUFA1, OXCT1, CANX, NDUFS8, GPX7, NDUFA8, PSMB5, NDUFS6, GSTM1, MUT, PDHA1, NDUFS2, ACSL3, PREP, SUCLA2, SUCLG2, SLC25A10, DECR1, ALAS1, NDUFC1, CKB, NDUFV2, NDUFS5, KIF11, CAD, MTHFD1, ALDH7A1, VDAC3, PYGB, PPIC, EHHADH, HTATIP2, NDUFB4, DCI, OGDH, APAF1, CYB5A, KIF5B, GGCX, NDUFA9, ACAT1, PCCB, NDUFS4, ARF4, HADHA, HADH, ALDH6A1, NDUFB6, NDUFA4, GLO1, ACADS, SLC25A12, MDH2, COPG, NNT, RB1, NDUFB8, AHCY, TUBB3, SDHA, BDH1, CPT2, NDUFB5, NDUFS1, IVD, UQCRC1, MDH1, SLC25A4, BCAT2, CYB5R3, NDUFB2, ACVR1, NDUFS3, ABAT, GSTM2, GOT1, SLC25A15, PDHB, CPE, SDHB, ACSL1, IDH3A, ASL, IDH3G, P4HB, NDUFB9, ACADM, NDUFA2, NDUFB3, PYCR1, RDH14, ACAD8, SLC25A5, ALDH2, SUCLG1, CALM1, IMPA1, GCAT, DARS
Gene SetLeading Edge Genes
MOOTHA HUMAN MITODB 6 2002BCS1L, DNM1L, HLCS, PCCA, MRPL12, MTIF2, OXCT1, NDUFS8, SLC25A16, NDUFA8, NDUFS6, MUT, PDHA1, NDUFS2, DIABLO, SLC25A10, DECR1, MTHFD1, VDAC3, SCP2, COX4NB, MRPS28, TOMM20, CYB5A, MRPL18, NDUFS4, HADH, ACSL5, NDUFB6, BCKDK, PRDX3, COX8A, ATP5B, IDH2, MDH2, MRPL48, PCK2, NDUFB8, MRPL17, TIMM17A, SLC25A11, BDH1, UQCRFS1, NDUFS1, UQCRC1, TSFM, POLG, MBD3, TUFM, ATP5J2, BCAT2, REXO2, AK2, BCKDHA, COX6C, NDUFS3, MFN2, ABAT, GOT1, PDHB, SDHB, SARDH, ACSL1, TOMM22, TFAM, ACADM, ACAA2, MRPS15, NDUFA2, ACAD8, GPD2, GCAT, MRPS14, ATP5L, ACADSB, MRPL49, NDUFA1, CYC1, ATP5O, ATP5S, ACSL3, SUCLA2, ACADVL, ALAS1, NDUFC1, NDUFV2, NDUFS5, MRPS16, DCI, IMMT, OGDH, APAF1, DGUOK, ETFB, NDUFA9, ACAT1, PCCB, HADHA, NDUFA4, ACADS, MKRN2, NNT, ATP5I, MLYCD, UQCR, NME4, MRPS34, UQCRH, SDHA, ETFDH, HADHB, CPT2, DAP3, HTATSF1, NDUFB5, IVD, SLC25A4, ATP5G1, CYB5B, CYB5R3, UQCRC2, NDUFB2, MRPL16, HAX1, TOMM40, SLC25A15, ATP5C1, IDH3A, IDH3G, ACO2, SLC9A6, NDUFB3, PYCR1, SLC25A17, ALDH2, SLC25A5, SUCLG1, ATP5G3
STEIN ESRRA TARGETS UPNNT, SLC31A1, MMACHC, PFKM, SEC23B, TRAK2, ACADSB, MGST3, TEX2, NDRG4, ACY1, ST3GAL5, ETFDH, AK1, BRP44, TRIM2, ABLIM1, ATP5O, MDH1, ATP5G1, SLC25A4, GSTM1, MUT, METTL7A, UGP2, PDHA1, PXMP4, NDUFS2, ACYP1, LETMD1, GMCL1, YIPF2, SUCLA2, NANS, MFN2, DECR1, GSTM2, CKB, GOT1, ATP5C1, SDHB, EPN3, PPIC, EHHADH, NUDT3, HTATIP2, ACAA2, ACADM, DCI, OGDH, ILVBL, ANXA6, NDUFA9, ACAT1, ST6GALNAC4, SUCLG1, ATP1B1, IMPA1, RNF5, LEFTY1
REACTOME ELECTRON TRANSPORT CHAINNDUFB8, UQCRH, ETFDH, SDHA, NDUFA1, NDUFB5, CYC1, NDUFS1, UQCRFS1, NDUFS8, NDUFA8, UQCRC1, NDUFS6, NDUFS2, COX6C, UQCRC2, NDUFB2, NDUFS3, NDUFB11, NDUFC1, COX5A, NDUFV2, NDUFS5, SDHB, NDUFB9, NDUFA2, ETFB, NDUFB3, NDUFA9, NDUFS4, NDUFA4, NDUFB6, COX8A
MOOTHA VOXPHOSBCS1L, ATP5I, NDUFA3, UQCR, NDUFB8, UQCRH, SDHA, ATP5H, NDUFA1, NDUFB5, CYC1, NDUFS1, NDUFS8, UQCRFS1, NDUFA8, UQCRC1, ATP5O, NDUFS6, ATP5G1, MBD3, ATP5J2, ATP5E, NDUFS2, COX6C, NDUFB2, UQCRC2, NDUFS3, NDUFC1, NDUFS5, SDHB, ATP5C1, NDUFB4, CYB5A, NDUFB3, NDUFA9, NDUFS4, NDUFA4, NDUFB6, ATP5G3, COX8A, ATP5B, ATP5L
RHEIN ALL GLUCOCORTICOID THERAPY DNINTS8, CETN2, PRDX4, CDK4, SPARC, PCCA, CANX, OXCT1, SH3BGRL, GPX7, HMGN2, MCTS1, HDDC2, UGP2, METTL5, MPP1, ATP9A, KIF11, GPR125, COPS6, EHBP1, CEP55, NUCB2, MYH10, SCP2, CYB5A, ACAT1, PCCB, NUDT1, ALDH6A1, HADH, GLO1, PRDX3, TALDO1, IDH2, PFKM, PRPS2, AHCY, STMN1, STOML2, NDUFB5, TOP2A, MDH1, PDIA6, CCT8, TUFM, GDI2, TMEM135, AK2, FHL1, MAGED1, ZFAND1, RSU1, ATP5C1, ITGB3BP, ACADM, ACAA2, HMMR, PSIP1, CCNB2, TTK, ECT2, POLE2, CALM1, RPL31, DARS, ATP5L
KEGG PROPANOATE METABOLISMACAT1, PCCB, MUT, ALDH6A1, ALDH7A1, ALDH2, SUCLG1, PCCA, EHHADH, HIBCH, SUCLA2, ACADM, ABAT
SHEN SMARCA2 TARGETS UPTRAK2, PRKAR1A, IDS, OSTM1, DLG1, STAG1, FBXO3, AASDHPPT, MECP2, ATP5O, MAP4K5, SP3, DDX1, CAND1, SLC30A5, ITFG1, ACTR10, METTL5, SUCLA2, RYK, RNF38, SUCLG2, NBR1, ATG3, SCFD1, NOL7, MLH1, GYG1, WDFY3, PHKB, CSE1L, SMC3, TMEM126B, SRP9, SERINC1, RDX, PRKRA, HMG20A, VBP1, PJA2, NDUFB6, XRCC5, PEX19, HIBCH, SLC25A12, USP1, TROVE2, ARFIP1, ARHGAP5, NNT, RB1, SEPHS1, TAF9B, COMMD10, PEX11B, MTO1, DHX29, ANKMY2, ARHGAP29, MAPK9, HTATSF1, SS18, BRWD2, FBXW2, ERCC3, RAB14, RMND5A, TMEM14A, AKAP11, TMED7, TMEM135, CAPN7, DDX46, RAB4A, UQCRC2, ACVR1, ZDHHC6, SNX5, UNC50, TLK1, CENPC1, PDHB, SENP6, MOCS2, COPS2, ORC4L, SMARCA2, TMED10, SNX2, PSMF1, USP9X, CUL2, DERA, APPBP2, RDH14, PSMD12, RCOR3, PURA, PCNP, SUCLG1, ANP32A, H2AFV, KIFAP3, TRAPPC4, RHOT1, MRPS14, PKN2
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 14FKBP11, RB1, SEC61B, THOP1, TUBB3, CDK4, YKT6, EIF2B5, MRPL12, CARM1, D17WSU104E, SYNCRIP, PSMB5, CCT8, VCL, SSR2, PREP, PTP4A3, 1110036O03RIK, GSTM2, GOLGA5, SERPINH1, HTRA2, CAD, IRAK1, SSR3, ASL, MRPS28, TYMS /// TYMS-PS, PTOV1, COL18A1, GORASP2, SMYD2, NSBP1, SEC61A1, RCN1, LMAN2, MORF4L2, 2900010M23RIK, SLC39A7, NDE1
REACTOME CITRIC ACID CYCLEDLST, NNT, SDHB, SUCLG1, SDHA, IDH3G, ACO2, SUCLA2, IDH2, SUCLG2, OGDH
TARTE PLASMA CELL VS B LYMPHOCYTE UPCAV1, PRDX4, PYGB, NUCB2, RPN2, SLC35B1, FUT8, P4HB, GGCX, TRAM1, FKBP2, PYCR1, PDIA6, ARF4, PDIA5, LMAN2
GRAHAM CML DIVIDING VS NORMAL QUIESCENT UPKIF20A, CDKN3, PRDX4, CCNB1, STMN1, CENPA, PBK, HIST1H1C, SFXN1, TOP2A, FBXO5, SYNCRIP, ABCD3, STK39, MICAL2, GSPT1, SAMM50, SUCLA2, ASPM, TPM1, KIF11, ITGB3BP, MRPS28, RPA3, HMMR, CCNA2, MRPS15, CCNB2, TTK, ECT2, CDC20, NUDT1, CCNE2, POLE2, IDH2, NT5DC2
NCI INSULIN SYNTHESIS AND SECRETIONKIF5B, TRAM1, SPCS3, SRP9, CPE, SEC61B, SSR3, RPN2, SSR4, SSR2, SPCS2, SRPR, SPCS1, DDOST, SRP72, STT3B, SRPRB
REACTOME MEMBRANE TRAFFICKINGAP3S1, ARFGAP1, SAR1B, COPE, SNX2, SEC31A, TXNDC5, COPZ1, AP1G1, CLTC, SORT1, COPB1, COPB2, COPA, COPG, ARRB1, TPD52L1, SNX5
KEGG CITRATE CYCLE TCA CYCLE
FLECHNER BIOPSY KIDNEY TRANSPLANT REJECTED VS OK DN
KEGG FATTY ACID METABOLISM
BIOCARTA BARRESTIN PATHWAY
NCI COPI MEDIATED TRANSPORT
REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM
SMITH TERT TARGETS UP
SCHUHMACHER MYC TARGETS UP
REACTOME INTEGRATION OF ENERGY METABOLISM
SHAFFER IRF4 TARGETS IN MYELOMA VS MATURE B LYMPHOCYTE
ZHANG BREAST CANCER PROGENITORS UP
WOO LIVER CANCER RECURRENCE DN
COLDREN GEFITINIB RESISTANCE UP
WEBER METHYLATED IN COLON CANCER
RODRIGUES THYROID CARCINOMA UP
HAMAI APOPTOSIS VIA TRAIL UP
NAKAMURA CANCER MICROENVIRONMENT DN
REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS
RODWELL AGING KIDNEY NO BLOOD DN
PETRETTO HEART MASS QTL CIS UP
NETPATH ANDROGEN RECEPTOR PATHWAY UP
KEGG GLYOXYLATE AND DICARBOXYLATE METABOLISM
KEGG BUTANOATE METABOLISM
CHUANG OXIDATIVE STRESS RESPONSE DN
REACTOME PYRUVATE METABOLISM AND TCA CYCLE
SCHLOSSER MYC TARGETS REPRESSED BY SERUM
REACTOME CLATHRIN DERIVED VESICLE BUDDING
KAAB HEART ATRIUM VS VENTRICLE DN
KEGG PYRUVATE METABOLISM
LANDIS ERBB2 BREAST PRENEOPLASTIC DN
SCHLOSSER MYC TARGETS AND SERUM RESPONSE DN
REACTOME COPI MEDIATED TRANSPORT
DAVICIONI PAX FOXO1 SIGNATURE IN ARMS UP
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
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TABLE OF Q-VALUES
helicobacter pylori kx2 npgecstreptococcus pyogeneshelicobacter pylori kx1 npgecGeneSet Name
-0.00502 -0.19624 -0.00231MOOTHA_HUMAN_MITODB_6_2002
-0.00631 -0.13889 -0.00298STEIN_ESRRA_TARGETS_UP
-0.00115 -0.11014 -0.00039REACTOME_ELECTRON_TRANSPORT_CHAIN
-0.00217 -0.09768 -0.00036MOOTHA_VOXPHOS
-0.00435 -0.19939 -0.00293RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN
-0.01525 -0.00519 -0.00444KEGG_PROPANOATE_METABOLISM
-0.00634 -0.02346 -0.00460SHEN_SMARCA2_TARGETS_UP
-0.00050 -0.08061 -0.00074YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_14
-0.00139 -0.12913 -0.00062REACTOME_CITRIC_ACID_CYCLE
-0.00608 -0.15095 -0.00116TARTE_PLASMA_CELL_VS_B_LYMPHOCYTE_UP
-0.00187 -0.19971 -0.00058GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP
-0.00740 -0.08421 -0.00208NCI_INSULIN_SYNTHESIS_AND_SECRETION
-0.00558 -0.04432 -0.00090REACTOME_MEMBRANE_TRAFFICKING
-0.00200 -0.02309 -0.00044KEGG_CITRATE_CYCLE_TCA_CYCLE
-0.01843 -0.02859 -0.00698FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_REJECTED_VS_OK_DN
-0.01884 -0.09623 -0.00133KEGG_FATTY_ACID_METABOLISM
-0.02629 -0.17796 -0.01605BIOCARTA_BARRESTIN_PATHWAY
-0.01280 -0.17829 -0.01707NCI_COPI_MEDIATED_TRANSPORT
-0.01157 -0.02037 -0.02227REACTOME_BRANCHED_CHAIN_AMINO_ACID_CATABOLISM
-0.17659 -0.17341 -0.19138SMITH_TERT_TARGETS_UP
-0.06579 -0.17135 -0.06234SCHUHMACHER_MYC_TARGETS_UP
-0.03792 -0.19574 -0.00853REACTOME_INTEGRATION_OF_ENERGY_METABOLISM
-0.19701 -0.19720 -0.15310SHAFFER_IRF4_TARGETS_IN_MYELOMA_VS_MATURE_B_LYMPHOCYTE
-0.04272 -0.00126 -0.01156ZHANG_BREAST_CANCER_PROGENITORS_UP
-0.12912 -0.17643 -0.10895WOO_LIVER_CANCER_RECURRENCE_DN
-0.02498 -0.17767 -0.10435COLDREN_GEFITINIB_RESISTANCE_UP
-0.01572 -0.09935 -0.06472WEBER_METHYLATED_IN_COLON_CANCER
-0.05002 -0.17750 -0.17195RODRIGUES_THYROID_CARCINOMA_UP
-0.06785 -0.03451 -0.13654HAMAI_APOPTOSIS_VIA_TRAIL_UP
-0.02590 -0.07518 -0.02848NAKAMURA_CANCER_MICROENVIRONMENT_DN
-0.10983 -0.13704 -0.01461REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS
-0.16787 -0.02298 -0.05746RODWELL_AGING_KIDNEY_NO_BLOOD_DN
-0.06473 -0.18022 -0.18917PETRETTO_HEART_MASS_QTL_CIS_UP
-0.00602 -0.02805 -0.00291NETPATH_ANDROGEN_RECEPTOR_PATHWAY_UP
-0.09811 -0.14248 -0.15364KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM
-0.01875 -0.03251 -0.01078KEGG_BUTANOATE_METABOLISM
-0.08963 -0.15434 -0.01490CHUANG_OXIDATIVE_STRESS_RESPONSE_DN
-0.02802 -0.09582 -0.00470REACTOME_PYRUVATE_METABOLISM_AND_TCA_CYCLE
-0.10600 -0.13805 -0.08176SCHLOSSER_MYC_TARGETS_REPRESSED_BY_SERUM
-0.06512 -0.19858 -0.01122REACTOME_CLATHRIN_DERIVED_VESICLE_BUDDING
-0.05248 -0.17783 -0.01535KAAB_HEART_ATRIUM_VS_VENTRICLE_DN
-0.11744 -0.02016 -0.12270KEGG_PYRUVATE_METABOLISM
-0.04527 -0.17701 -0.02811LANDIS_ERBB2_BREAST_PRENEOPLASTIC_DN
-0.10959 -0.19615 -0.17846SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_DN
-0.01173 -0.17540 -0.01582REACTOME_COPI_MEDIATED_TRANSPORT
-0.15952 -0.19392 -0.05505DAVICIONI_PAX_FOXO1_SIGNATURE_IN_ARMS_UP